[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 50 items for (author: gonzalez & jr & r)

EMDB-51486:
Salmonella cap-filament complex
Method: single particle / : Qin K, Einenkel R, Erhardt M, Bergeron JRC

EMDB-51493:
Salmonella hook-filament junction complex
Method: single particle / : Qin K, Einenkel R, Erhardt E, Bergeron JR

EMDB-51555:
Sub-tomogram average of Salmonella flagellar tip
Method: electron tomography / : Al-Otaibi NS, Mann D, Bergeron JRC

EMDB-51557:
Campylobacter hook-filament junction-cap complex
Method: single particle / : Qin K, Gonzalez-Rodriguez N, Shmakova E, Beeby M, Bergeron JRC

EMDB-25026:
Anaphase Promoting Complex delta APC7
Method: single particle / : Ferguson CJ, Brown NG, Prabu JR, Watson ER, Schulman BA, Bonni A

EMDB-25027:
Anaphase Promoting Complex delta APC7 + UBE2C,substrate,UbV,CDH1
Method: single particle / : Ferguson CJ, Brown NG, Prabu JR, Watson ER, Schulman BA, Bonni A

EMDB-23211:
Cryo-EM structure of human ACE2 receptor bound to protein encoded by vaccine candidate BNT162b1
Method: single particle / : Lees JA, Han S

EMDB-23215:
Cryo-EM structure of protein encoded by vaccine candidate BNT162b2
Method: single particle / : Lees JA, Han S

EMDB-23016:
Cryo-EM structure of prefusion SARS-CoV-2 spike glycoprotein in complex with 910-30 Fab
Method: single particle / : Cerutti G, Shapiro L

EMDB-23039:
Cryo-EM map of SARS-CoV-2 spike glycoprotein in complex with 910-30 Fab (disrupted form)
Method: single particle / : Cerutti G, Shapiro L

EMDB-0643:
30S initiation complex
Method: single particle / : Frank J, Gonzalez Jr RL

EMDB-0661:
70S Elongation Competent Ribosome
Method: single particle / : Frank J, Gonzalez Jr RL

EMDB-0662:
70S initiation complex
Method: single particle / : Frank J, Gonzalez Jr RL

PDB-6o7k:
30S initiation complex
Method: single particle / : Frank J, Gonzalez Jr RL, kaledhonkar S, Fu Z, Caban K, Li W, Chen B, Sun M

PDB-6o9j:
70S Elongation Competent Ribosome
Method: single particle / : Frank J, Gonzalez Jr RL, Kaledhonkar S, Fu Z, Caban K, Li W, Chen B, Sun M

PDB-6o9k:
70S initiation complex
Method: single particle / : Frank J, Gonzalez Jr RL, kaledhonkar S, Fu Z, Caban K, Li W, Chen B, Sun M

EMDB-3619:
RnQV1-W1118 empty capsid
Method: single particle / : Mata CP, Luque D, Gomez-Blanco J, Rodriguez JM, Suzuki N, Ghabrial SA, Carrascosa JL, Trus BL, Caston JR

EMDB-3437:
Three-dimensional reconstruction of W1075 strain Rosellinia necatrix quadrivirus 1
Method: single particle / : Luque D, Mata CP, Gonzalez-Camacho F, Gonzalez JM, Gomez-Blanco J, Alfonso C, Rivas G, Havens WM, Kanematsu S, Suzuki N, Ghabrial SA, Trus BL, Caston JR

EMDB-3438:
Three-dimensional reconstruction of W1118 strain Rosellinia necatrix quadrivirus 1
Method: single particle / : Luque D, Mata CP, Gonzalez-Camacho F, Gonzalez JM, Gomez-Blanco J, Alfonso C, Rivas G, Havens WM, Kanematsu S, Suzuki N, Ghabrial SA, Trus BL, Caston JR

EMDB-2976:
Time-resolved Cryo Electron Microscopy of ribosome subunit association
Method: single particle / : Chen B, Kaledhonkar S, Sun M, Shen B, Lu Z, Barnard D, Lu T, Gonzalez Jr R, Frank J

EMDB-2977:
Time-resolved Cryo Electron Microscopy of ribosome subunit association
Method: single particle / : Chen B, Kaledhonkar S, Sun M, Shen B, Lu Z, Barnard D, Lu T, Gonzalez Jr R, Frank J

EMDB-2978:
Time-resolved Cryo Electron Microscopy of ribosome subunit association
Method: single particle / : Chen B, Kaledhonkar S, Sun M, Shen B, Lu Z, Barnard D, Lu T, Gonzalez Jr R, Frank J

EMDB-2573:
SA11 Rotavirus non-trypsinized Triple Layered Particle
Method: single particle / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-2574:
SA11 Rotavirus trypsinized Triple Layered Particle
Method: single particle / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-2575:
SA11 Rotavirus non-trypsinized Triple Layered Particle grown in absence of leupetin
Method: single particle / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-2576:
OSU Rotavirus non-trypsinized Triple Layered Particle
Method: single particle / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-2577:
OSU Rotavirus trypsinized Triple Layered Particle
Method: single particle / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-2578:
Class 1 averaged spike from SA11 Rotavirus non-trypsinized Triple Layered Particle
Method: subtomogram averaging / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-2579:
Class 2 averaged spike from SA11 Rotavirus non-trypsinized Triple Layered Particle
Method: subtomogram averaging / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-2580:
Class 1 averaged spike from SA11 Rotavirus trypsinized Triple Layered Particle
Method: subtomogram averaging / : Rodriguez JM, Chichon FJ, Martin-Forero E, Gonzalez-Camacho F, Carrascosa JL, Caston JR, Luque D

EMDB-5600:
Penicillium Chrysogenum Virus (PcV) capsid structure
Method: single particle / : Luque D, Gomez-Blanco J, Garriga D, Brilot A, Gonzalez JM, Havens WH, Carrascosa JL, Trus BL, Verdaguer N, Grigorieff N, Ghabrial SA, Caston JR

EMDB-5784:
EttA-bound E. coli 70S ribosome complex containing P-site tRNA and A-site tRNA
Method: single particle / : Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez RL, Hunt JF, Frank J

EMDB-5785:
EttA-bound E. coli 70S ribosome complex containing P-site tRNA
Method: single particle / : Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez RL, Hunt JF, Frank J

EMDB-5786:
EttA-bound E. coli 70S ribosome complex
Method: single particle / : Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez RL, Hunt JF, Frank J

EMDB-5841:
EttA-bound E. coli 70S ribosome complex containing P-site tRNA and A-site tRNA (raw map)
Method: single particle / : Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez RL, Hunt JF, Frank J

EMDB-5842:
EttA-bound E. coli 70S ribosome complex containing P-site tRNA (raw map)
Method: single particle / : Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez RL, Hunt JF, Frank J

EMDB-5843:
EttA-bound E. coli 70S ribosome complex (raw map)
Method: single particle / : Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez RL, Hunt JF, Frank J

EMDB-5713:
Electron microscopy of negatively-stained gp12 tubular protein of T7 bacteriophage
Method: single particle / : Cuervo A, Pulido-Cid M, Chagoyen M, Arranz R, Gonzalez-Garcia VA, Garcia-Doval C, Caston JR, Valpuesta JM, van Raaij MJ, Martin-Benito J, Carrascosa JL

EMDB-5689:
Cryo-electron microscopy of T7 tail complex
Method: single particle / : Cuervo A, Pulido-Cid M, Chagoyen M, Arranz R, Gonzalez-Garcia VA, Garcia-Doval C, Caston JR, Valpuesta JM, van Raaij MJ, Martin-Benito J, Carrascosa JL

EMDB-5690:
Cryo-electron microscopy of T7 tail complex formed by gp8, gp11, and gp12 proteins
Method: single particle / : Cuervo A, Pulido-Cid M, Chagoyen M, Arranz R, Gonzalez-Garcia VA, Garcia-Doval C, Caston JR, Valpuesta JM, van Raaij MJ, Martin-Benito J, Carrascosa JL

EMDB-2062:
Cryphonectria nitschkei Virus (CnV)capsid
Method: single particle / : Gomez-Blanco J, Luque D, Gonzalez JM, Carrascosa JL, Alfonso C, Trus B, Havens WH, Ghabrial SA, Caston JR

EMDB-1933:
wt Rabbit Hemorrhagic Disease Virus (RHDV)capsid
Method: single particle / : Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

EMDB-1934:
L17 Rabbit Hemorrhagic Disease Virus (RHDV)capsid
Method: single particle / : Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

EMDB-1935:
L42 Rabbit Hemorrhagic Disease Virus (RHDV)capsid
Method: single particle / : Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

EMDB-1936:
N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid
Method: single particle / : Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

EMDB-1937:
N42 Rabbit Hemorrhagic Disease Virus (RHDV) T4 capsid
Method: single particle / : Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

EMDB-1938:
C42 Rabbit Hemorrhagic Disease Virus (RHDV) capsid
Method: single particle / : Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

EMDB-1939:
Rabbit Hemorrhagic Disease Virus (RHDV)capsid calculated from merged wt, L17 and N42 data sets
Method: single particle / : Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

EMDB-1610:
7.5 Amstrong resolution cryo-electron microscopy reconstruction of Penicillium chrysogenum virus (PcV)
Method: single particle / : Luque D, Gonzalez JM, Garriga D, Ghabrial SA, Trus B, Verdaguer N, Carrascosa JL, Caston JR

EMDB-1611:
7.5 Amstrong resolution cryo-electron microscopy reconstruction of Penicillium chrysogenum virus (PcV)
Method: single particle / : Luque D, Gonzalez JM, Garriga D, Ghabrial SA, Trus B, Verdaguer N, Carrascosa JL, Caston JR

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more