[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,755 items for (author: enne & t)

EMDB-53238:
Invasive protrusion of a flam-del-412-St2 Drosophila follicle
Method: electron tomography / : Voichek M, Bernhard A, Brennecke J

EMDB-53132:
Rubisco subtomogram average from chloroplasts of two weeks old Physcomitrium patens protonemata cells.
Method: subtomogram averaging / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53134:
Cryo-electron tomograms of Arabidopsis thaliana embryos.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53136:
Cryo-electron tomograms of Limonium bicolor salt gland.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53142:
Cryo-electron tomograms of Physcomitrium patens phyllids.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-74146:
Cryo-EM Structure of Human STAT2-USP18-ISG15 Complex
Method: single particle / : Huynh KW, Yamaguchi M

EMDB-70083:
Human 80S ribosome stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

EMDB-70084:
Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

EMDB-70086:
Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

PDB-9o3v:
Human 80S ribosome stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

PDB-9o3w:
Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

PDB-9o3y:
Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

EMDB-53847:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

PDB-9r90:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

EMDB-54384:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busandiego R

EMDB-54398:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busandiego R

EMDB-54405:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54406:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54407:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54420:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54421:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54422:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54424:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54432:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54447:
Subtomogram average of synaptic microtubule from rat hippocampal neurons
Method: subtomogram averaging / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-52634:
Single particle cryo electron microscopy of a Fab fragment bound to recombinant human CD40 ligand
Method: single particle / : Kristoffersen EL, Schinkel T, Andersen ES

PDB-9i5n:
Single particle cryo electron microscopy of a Fab fragment bound to recombinant human CD40 ligand
Method: single particle / : Kristoffersen EL, Schinkel T, Andersen ES

EMDB-72655:
Gb1g2 crosslinked to PLCb3
Method: single particle / : Fisher IJ, Lyon AM

EMDB-72732:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

EMDB-72733:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

PDB-9y7h:
Gb1g2 crosslinked to PLCb3
Method: single particle / : Fisher IJ, Lyon AM

PDB-9yao:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

PDB-9yap:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

EMDB-56238:
In situ cryo-ET subtomogram averaged map of Flotillin complex
Method: subtomogram averaging / : Li D, Lizarrondo J, Wilfling F

EMDB-56295:
In situ cryo-ET tomogram of a lysosomal structure in untreated HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56296:
In situ cryo-ET tomogram of lysosome damaged by LLOMe (0.5mM, 60min) in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56297:
In situ cryo-ET of lysosome damaged by LLOMe (0.5mM, 60min) encapsulated in an autophagosome in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56298:
In situ cryo-ET tomogram of lysosomes in BAPTA AM pre-treated (50uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56300:
In situ cryo-ET tomogram of lysosomes in LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56327:
In situ cryo-ET tomogram of lysosomal structure in untreated rat hippocampal neurons
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-56329:
In situ cryo-ET tomogram of lysosomes in E64d pre-treated (20uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56330:
In situ cryo-ET tomogram of lysosomal structure in LLOMe-treated (0.5mM, 1h) rat hippocampal neuron.
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-70791:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

PDB-9os2:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

EMDB-54428:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 3A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

EMDB-54446:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 2.8A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

EMDB-54907:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 3.3A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

EMDB-54908:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 4.2A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

PDB-9s0z:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 3A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

PDB-9s1e:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 2.8A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more