[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 164 items for (author: engel & bd)

EMDB-54837:
Chlamydomonas nuclear envelope-bound ribosome
Method: subtomogram averaging / : Waltz F, Lamm L, Righetto RD, Engel BD

EMDB-55390:
In situ cryo-electron tomogram of a mouse rod photoreceptor cell containing the centriolar luminal distal ring
Method: electron tomography / : Mukherjee S, Daraspe J, Genoud C, Hamel V, Guichard P

EMDB-55391:
In situ cryo-electron tomogram of a mouse rod photoreceptor cell containing the centriolar luminal distal ring
Method: electron tomography / : Mukherjee S, Daraspe J, Genoud C, Hamel V, Guichard P

EMDB-51847:
80S Ribosome Average for EMPIAR-11830
Method: subtomogram averaging / : Khavnekar S

EMDB-55393:
Subtomogram average of the hook density between microtubule doublets/triplets
Method: subtomogram averaging / : McCafferty C, van den Hoek HG, Righetto RD, Van der Stappen P, Mueller A, Stearns T, Engel BD

EMDB-55394:
Subtomogram average of the luminal distal ring from MTEC centrioles
Method: subtomogram averaging / : McCafferty C, van den Hoek HG, Righetto RD, Mueller A, Van der Stappen P, Stearns T, Engel BD

EMDB-55386:
Tomogram of a mouse tracheal epithelial cell containing the C2CD3 luminal ring protein
Method: electron tomography / : van den Hoek HG, McCafferty C, Righetto RD, Stearns T, Engel BD

EMDB-50202:
Structure of the Chlamydomonas reinhardtii respiratory supercomplex I1 III2 IV2
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50203:
Structure of the Chlamydomonas reinhardtii respiratory complex I from respiratory supercomplex
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50204:
Structure of the Chlamydomonas reinhardtii respiratory complex III from respiratory supercomplex
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50205:
Structure of the Chlamydomonas reinhardtii respiratory complex IV from respiratory supercomplex
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50206:
Structure of the Chlamydomonas reinhardtii respiratory complex IV from respiratory supercomplex
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50207:
Structure of the Chlamydomonas reinhardtii respiratory supercomplex, focused on complex I matrix part
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50208:
Structure of the Chlamydomonas reinhardtii respiratory supercomplex, focused on complex I proximal membrane part
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50209:
Structure of the Chlamydomonas reinhardtii respiratory supercomplex, focused on complex I distal membrane part
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50210:
Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome - C2 symmetry
Method: subtomogram averaging / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50211:
Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome - C2 expanded
Method: subtomogram averaging / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50212:
Structure of the putative Chlamydomonas mitochondrial prohibitin
Method: subtomogram averaging / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50213:
Subtotomogram average of Chlamydomonas mitochondrial ribosome
Method: subtomogram averaging / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50214:
Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome - C2 expanded, complex I focus
Method: subtomogram averaging / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50215:
Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome - C2 expanded, complex III focus
Method: subtomogram averaging / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50216:
Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome - C1 symmetry
Method: subtomogram averaging / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50248:
Structure of the Chlamydomonas reinhardtii respiratory supercomplex, focused on complex I
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-50249:
Structure of the Chlamydomonas reinhardtii respiratory supercomplex I1 III2 IV2
Method: single particle / : Waltz F, Righetto R, Kotecha A, Engel BD

EMDB-52542:
Cryo-electron tomogram of intact spinach chloroplast at 14.08A bin4 pixel size; denoised with cryoCARE to improve contrast.
Method: electron tomography / : Wietrzynski W, Lamm L, Engel BD

EMDB-52543:
Cryo-ET tomogram #5 of thylakoids inside spinach chloroplast (top view on the membranes)
Method: electron tomography / : Wietrzynski W, Lamm L, Engel BD

EMDB-52544:
Cryo-electron tomogram # 32 of thylakoids in spinach chloroplast. Denoised with CryoCARE
Method: electron tomography / : Wietrzynski W, Lamm L, Engel BD

EMDB-52545:
Cryo-electron tomogram #12 of thylakoids in spinach chloroplast. Denoised with cryoCARE.
Method: electron tomography / : Wietrzynski W, Lamm L, Engel BD

EMDB-52546:
Cryo-electron tomogram of thylakoids in spinach chloroplast.
Method: electron tomography / : Wietrzynski W, Lamm L, Engel BD

EMDB-52547:
Cryo-electron tomogram of thylakoids from broken spinach chloroplast. Denoised with cryoCARE.
Method: electron tomography / : Wietrzynski W, Lamm L, Engel BD

EMDB-52548:
Cryo-electron tomogram #01 of thylakoids in spinach chloroplast. Denoised with cryoCARE
Method: electron tomography / : Wietrzynski W, Lamm L, Engel BD

EMDB-51789:
In situ clathrin subtomogram average from Chlamydomonas reinhardtii
Method: subtomogram averaging / : Tagiltsev G, Righetto RD, Khavnekar S, Kotecha A, Engel BD, Briggs JAG

EMDB-51731:
In situ PSII subtomogram average from Chlamydomonas reinhardtii
Method: subtomogram averaging / : van Dorst S, Heebner JE, Lamm L, Righetto RD, Wietrzynski W, Khavnekar S, Kotecha A, Engel BD

EMDB-51423:
Tomogram of pyrenoid of T. pseudonana Shell4 knock-out
Method: electron tomography / : Demulder M, Engel B

EMDB-51424:
Tomogram of pyrenoid of T. pseudonana Shell4 knock-out
Method: electron tomography / : Demulder M, Engel B

EMDB-51425:
Tomogram of pyrenoid of T. pseudonana Shell4 knock-out
Method: electron tomography / : Demulder M, Engel B

EMDB-51427:
Tomogram of pyrenoid of T. pseudonana
Method: electron tomography / : Demulder M, Engel B

EMDB-37751:
Cryo-EM structure of T. pseudonana PyShell helical tube
Method: helical / : Kawamoto A, Tohda R, Gerle C, Kurisu G

EMDB-18709:
Subtomogram average of the T. pseudonana PyShell
Method: subtomogram averaging / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18710:
Tomogram of P. tricornutum pyrenoid
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18711:
Tomogram of T. pseudonana pyrenoid
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18712:
Tomogram of PyShell mutant (M1) T. pseudonana
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18713:
Tomogram of PyShell mutant (M2) T. pseudonana
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18841:
Tomogram of T. pseudonana pyrenoid used for subtomogram avergaing
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-19906:
In situ nucleosome subtomogram average from Chlamydomonas reinhardtii
Method: subtomogram averaging / : Michael AK, Righetto RD, Obr M, van der Stappen P, Lamm L, Khavnekar S, Kotecha A, Engel BD

EMDB-13477:
Small subunit of the Chlamydomonas reinhardtii mitoribosome
Method: single particle / : Waltz F, Soufari H, Hashem Y

EMDB-16451:
Subtomogram average of the T. kivui 70S ribosome in situ
Method: subtomogram averaging / : Righetto RD, Dietrich HM, Kumar A, Wietrzynski W, Schuller SK, Trischler R, Wagner J, Schwarz FM, Mueller V, Schuller JM, Engel BD

EMDB-15252:
In situ subtomogram average of the C. reinhardtii stellate at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15253:
In situ subtomogram average of the C. reinhardtii Y-link at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15254:
In situ subtomogram average of the C. reinhardtii MTD sleeve at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more