[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 69 items for (author: efremov & rg)

EMDB-17112:
Structure of apo form of human gamma-secretase PSEN1 APH-1B isoform reconstituted into lipid nanodisc

EMDB-17113:
Structure of human gamma-secretase PSEN1 APH-1B isoform reconstituted into lipid nanodisc in complex with Ab46

EMDB-16157:
Map of GroEL:GroES-(ADP) complex plunge frozen 200 ms after reaction initiation with ATP

EMDB-40676:
Human TRP channel TRPV6 in cNW30 nanodiscs inhibited by tetrahydrocannabivarin (THCV)

PDB-8sp8:
Human TRP channel TRPV6 in cNW30 nanodiscs inhibited by tetrahydrocannabivarin (THCV)

EMDB-16091:
Cryo-EM structure of beta-galactosidase at 3.3 A resolution plunged 5 ms after mixing with apoferritin

EMDB-16092:
Cryo-EM structure of beta-galactosidase at 2.9 A resolution plunged 205 ms after mixing with apoferritin

EMDB-16093:
Cryo-EM structure of mouse heavy-chain apoferritin at 2.1 A plunged 5ms after mixing with b-galactosidase

EMDB-16094:
Cryo-EM structure of mouse heavy-chain apoferritin at 2.7 A plunged 35ms after mixing with b-galactosidase

EMDB-16095:
Cryo-EM structure of mouse heavy-chain apoferritin at 2.2 A plunged 205ms after mixing with b-galactosidase

EMDB-16097:
Cryo-EM structure of beta-galactosidase at 3.2 A resolution plunged 35 ms after mixing with apoferritin

EMDB-16099:
GroEL:GroES-ATP complex under continuous turnover condirions

EMDB-16100:
Structure of GroEL-ATP complex plunge frozen 200 ms after reaction initiation

EMDB-16102:
Structure of GroEL-nucleotide complex in ADP-like conformation plunged 13 ms after mixing with ATP

EMDB-16106:
Structure of the GroEL-ATP complex plunge-frozen 50 ms after mixing with ATP

EMDB-16107:
Structure of the GroEL(ATP7/ADP7) complex plunged 13 ms after mixing with ATP

EMDB-16108:
Structure of GroEL-nucleotide complex in ADP-like conformation plunged 50 ms after mixing with ATP

EMDB-16109:
Structure of the GroEL(ATP7/ADP7) complex plunged 50 ms after mixing with ATP

EMDB-16115:
Structure of the GroEL-ATP complex plunge-frozen 13 ms after mixing with ATP

EMDB-16116:
Structure of GroEL:GroES-ATP complex plunge frozen 200 ms after reaction initiation

EMDB-16117:
Structure of GroEL:GroES-ATP complex under continuous turnover conditions

EMDB-16118:
Structure of GroEL-ATP complex under continuous turnover conditions

EMDB-16119:
Structure of GroEL:GroES complex exhibiting ADP-conformation in trans ring obtained under the continuous turnover conditions

EMDB-16125:
Structure of GroEL:GroES-ATP complex plunge frozen 200 ms after reaction initiation

EMDB-16154:
Map of the GroEL-ES-ATP complex plunge-frozen 50 ms after mixing with ATP

EMDB-16308:
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (dataset 1)

EMDB-16314:
Alvinella pompejana nicotinic acetylcholine receptor Alpo in apo state (dataset 2)

EMDB-16315:
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_LMNG_Serotonin dataset 4)

EMDB-16316:
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_comb dataset 3)

EMDB-16317:
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_apo, dataset 1)

EMDB-16326:
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in complex with CHAPS(Alpo4_CHAPS)

EMDB-29343:
Cryo-EM structure of human TRPV6 in complex with the natural phytoestrogen genistein

EMDB-29344:
Cryo-EM structure of human TRPV6 in the open state

PDB-8foa:
Cryo-EM structure of human TRPV6 in complex with the natural phytoestrogen genistein

PDB-8fob:
Cryo-EM structure of human TRPV6 in the open state

EMDB-15213:
Cryo-EM density map of Tn4430 TnpA hyperactive mutant (TnpA3X) in complex with IR48 substrate.

EMDB-15218:
Medium resolution cryo-EM density map of Tn4430 TnpA transposase from Tn3 family in apo state

EMDB-13906:
Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 100 bp long transposon end DNA

EMDB-13908:
Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 48 bp long transposon end DNA

EMDB-13909:
Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with strand-transfer like DNA product

EMDB-13910:
Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in apo state

EMDB-12653:
Respiratory complex I from Escherichia coli - conformation 1

EMDB-12654:
Respiratory complex I from Escherichia coli - conformation 2

EMDB-12655:
Respiratory complex I from Escherichia coli - conformation 3

EMDB-13291:
Respiratory complex I from Escherichia coli solubilized in LMNG

EMDB-12652:
Respiratory complex I from Escherichia coli - focused refinement of membrane arm

EMDB-12661:
Respiratory complex I from Escherichia coli - focused refinement of cytoplasmic arm

EMDB-23853:
Mouse TRPV3 in MSP2N2 nanodiscs, closed state at 4 degrees Celsius

EMDB-23854:
Mouse TRPV3 in MSP2N2 nanodiscs, closed state at 42 degrees Celsius

EMDB-23855:
Mouse TRPV3 in MSP2N2 nanodiscs, sensitized state at 42 degrees Celsius

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more