[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 86 items for (author: dong & zy)

EMDB-65163:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66328:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66330:
focused map for HSV-1 helicase-primase in complex with ssDNA, ADP and magnesium
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-62441:
CryoEM structure of osPHT1-11 at pH 8.0
Method: single particle / : Du ZM, Guan ZY, Liu Z

EMDB-62480:
CryoEM structure of osPHT1-11 at pH 5.0
Method: single particle / : Du ZM, Guan ZY, Liu Z

EMDB-61289:
Herpes simplex virus type 1 polymerase machinery in complex with duplex DNA, acyclovir triphosphate and calcium ions
Method: single particle / : Wu YQ, Chen XL, Jiang ZY, Li DY, Zhang ZY, Dong CJ

EMDB-47929:
Human LARP1 bound to the 40S small ribosomal subunit
Method: single particle / : Dong W, Kaufhold R, Brito Querido J

PDB-9ed0:
Human LARP1 bound to the 40S small ribosomal subunit
Method: single particle / : Dong W, Kaufhold R, Brito Querido J

EMDB-39711:
Cryo-EM structure of dimer HtmB2-CT
Method: single particle / : Sun YH, Zhang ZY, Mei Q

EMDB-39713:
Cryo-EM structure of tetramer HtmB2-CT
Method: single particle / : Sun YH, Zhang ZY, Mei Q

EMDB-39714:
Cryo-EM structure of trimer HtmB2-CT
Method: single particle / : Sun YH, Zhang ZY, Mei Q

EMDB-60273:
Cryo-EM structure of a short prokaryotic Argonaute system from archaeon Suldolobus islandicus
Method: single particle / : Dai ZK, Guan ZY, Han WY, Zou TT

EMDB-63074:
Cryo-EM structure of SiAgo-Aga1 complex
Method: single particle / : Dai ZK, Guan ZY, Zou TT

EMDB-41233:
Complex of NPR1 ectodomain with ANP plus an allosteric activating antibody, REGN5381
Method: single particle / : Franklin MC, Romero Hernandez A

EMDB-41234:
Complex of NPR1 ectodomain and REGN5381 Fab in an active-like state with no ANP bound
Method: single particle / : Franklin MC, Romero Hernandez A

PDB-8tg9:
Complex of NPR1 ectodomain with ANP plus an allosteric activating antibody, REGN5381
Method: single particle / : Franklin MC, Romero Hernandez A

PDB-8tga:
Complex of NPR1 ectodomain and REGN5381 Fab in an active-like state with no ANP bound
Method: single particle / : Franklin MC, Romero Hernandez A

EMDB-39858:
Cryo-EM structure of the insect olfactory receptor OR5-Orco heterocomplex from Acyrthosiphon pisum bound with geranyl acetate
Method: single particle / : Wang YD, Qiu L, Guan ZY, Wang Q, Wang GR, Yin P

EMDB-39873:
Cryo-EM structure of the insect olfactory receptor OR5-Orco heterocomplex from Acyrthosiphon pisum
Method: single particle / : Wang YD, Qiu L, Guan ZY, Wang Q, Wang GR, Yin P

EMDB-38077:
Cryo-EM structure of ATP-bound FtsE(E163Q)X
Method: single particle / : Zhang ZY, Chen YT

EMDB-33625:
Cryo-EM structure of the monomeric human CAF1LC-H3-H4 complex
Method: single particle / : Liu CP, Yu ZY, Yu C, Xu RM

EMDB-33626:
Cryo-EM structure of the dimeric human CAF1LC-H3-H4 complex
Method: single particle / : Liu CP, Yu C, Yu ZY, Xu RM

EMDB-33627:
Cryo-EM structure of the left-handed Di-tetrasome
Method: single particle / : Liu CP, Yu ZY, Yu C, Xu RM

EMDB-33630:
Cryo-EM structure of human CAF1LC bound right-handed Di-tetrasome
Method: single particle / : Liu CP, Yu C, Yu ZY, Xu RM

EMDB-33631:
Cryo-EM structure of the two CAF1LCs bound right-handed Di-tetrasome
Method: single particle / : Liu CP, Yu ZY, Yu C, Xu RM

EMDB-35660:
Composite cryo-EM density map of the dimeric human CAF1-H3-H4 complex
Method: single particle / : Liu CP, Yu ZY, Xu RM

EMDB-35661:
Cryo-EM structure of the monomeric human CAF1-H3-H4 complex
Method: single particle / : Liu CP, Yu ZY, Xu RM

EMDB-35708:
Cryo-EM consensus map of the dimeric human CAF1-H3-H4 complex
Method: single particle / : Liu CP, Yu ZY, Xu RM

EMDB-35709:
Local refinement cryo-EM map of protomer I of the dimeric human CAF1-H3-H4 complex
Method: single particle / : Liu CP, Yu ZY, Xu RM

EMDB-35710:
Local refinement cryo-EM map of protomer II of the dimeric human CAF1-H3-H4 complex
Method: single particle / : Liu CP, Yu ZY, Xu RM

EMDB-36013:
Cryo-EM structure of the single CAF-1 bound right-handed Di-tetrasome
Method: single particle / : Liu CP, Yu ZY, Xu RM

EMDB-36014:
Cryo-EM structure of the double CAF-1 bound right-handed Di-tetrasome
Method: single particle / : Liu CP, Yu ZY, Xu RM

EMDB-33474:
Structure of ATP7B C983S/C985S/D1027A mutant with Cu+ in presence of ATOX1
Method: single particle / : Yang G, Xu L, Chang S, Guo J, Wu Z

EMDB-33472:
Structure of ATP7B C983S/C985S/D1027A mutant in presence of ATOX1
Method: single particle / : Yang G, Xu L, Guo J, Wu Z

EMDB-33475:
Structure of ATP7B C983S/C985S/D1027A mutant
Method: single particle / : Yang G, Xu L, Guo J, Wu Z

EMDB-33476:
Structure of ATP7B C983S/C985S/D1027A mutant with cisplatin in presence of ATOX1
Method: single particle / : Yang G, Xu L, Chang S, Guo J, Wu Z

EMDB-35628:
Structure of ATP7B C983S/C985S/D1027A mutant with AMP-PNP
Method: single particle / : Yang G, Xu L, Guo J, Wu Z

EMDB-24346:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-80 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24348:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-081 Fab
Method: single particle / : Saphire EO, Li H

EMDB-24349:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-091 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24350:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-094 VHH-Fc
Method: single particle / : Saphire EO, Li H

EMDB-24351:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-096 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24358:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-147 IgG
Method: single particle / : Saphire EO, Yu X

EMDB-24359:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-246 IgG
Method: single particle / : Saphire EO, Rayaprolu V

EMDB-24335:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-259 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24336:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-186 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24337:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-199 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24338:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-249 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24339:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-252 IgG
Method: single particle / : Saphire EO, Li H

EMDB-24340:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-049 IgG
Method: single particle / : Saphire EO, Li H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more