[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 29 items for (author: d & urso & g)

EMDB-48323:
Structure of the IFIT2-IFIT3 heterodimer from Mus musculus
Method: single particle / : Glasner DR, Todd C, Cook BD, DUrso A, Khosla S, Estrada E, Wagner J, Bartels MD, Ford P, Prych J, Hatch K, Yee BA, Ego KM, Liang Q, Holland SR, Case JB, Corbett KD, Diamond MS, Yeo GW, Herzik Jr MA, Van Nostrand EL, Daugherty MD

PDB-9mk9:
Structure of the IFIT2-IFIT3 heterodimer from Mus musculus
Method: single particle / : Glasner DR, Todd C, Cook BD, DUrso A, Khosla S, Estrada E, Wagner J, Bartels MD, Ford P, Prych J, Hatch K, Yee BA, Ego KM, Liang Q, Holland SR, Case JB, Corbett KD, Diamond MS, Yeo GW, Herzik Jr MA, Van Nostrand EL, Daugherty MD

EMDB-43585:
Structure of the AcMNPV baculovirus VP39 nucleocapsid (C14 helical reconstruction)
Method: helical / : Hardy JM, Johnstone BA, Ha JH, Venugopal H, Coulibaly F

EMDB-43586:
Structure of the baculovirus major nucleocapsid protein VP39 (localised reconstruction)
Method: single particle / : Johnstone BA, Hardy JM, Ha JH, Venugopal H, Coulibaly F

EMDB-43587:
The base complex of the baculovirus nucleocapsid (Autographa californica multiple nucleopolyhedrovirus)
Method: single particle / : Johnstone BA, Koszalka P, Venugopal H, Coulibaly F

EMDB-43589:
The base complex of the AcMNPV baculovirus nucleocapsid (Class 2, localised reconstruction)
Method: single particle / : Johnstone BA, Koszalka P, Ha J, Venugopal H, Coulibaly F

EMDB-43590:
The cap complex of the baculovirus nucleocapsid (Autographa californica multiple nucleopolyhedrovirus)
Method: single particle / : Johnstone BA, Koszalka P, Venugopal H, Coulibaly F

EMDB-43591:
The cap of the AcMNPV baculovirus nucleocapsid (localised reconstruction)
Method: single particle / : Johnstone BA, Koszalka P, Venugopal H, Coulibaly F

PDB-8vwh:
Structure of the baculovirus major nucleocapsid protein VP39 (localised reconstruction)
Method: single particle / : Johnstone BA, Hardy JM, Ha JH, Venugopal H, Coulibaly F

PDB-8vwj:
The base complex of the AcMNPV baculovirus nucleocapsid (Class 2, localised reconstruction)
Method: single particle / : Johnstone BA, Koszalka P, Ha J, Venugopal H, Coulibaly F

EMDB-43588:
The base complex of the AcMNPV baculovirus nucleocapsid (Class 1, localised reconstruction)
Method: single particle / : Johnstone BA, Koszalka P, Ha J, Venugopal H, Coulibaly F

EMDB-15116:
Structural insights into the binding of bS1 to the ribosome
Method: single particle / : D'Urso G, Chat S, Gillet R, Giudice E

PDB-8a3l:
Structural insights into the binding of bS1 to the ribosome
Method: single particle / : D'Urso G, Chat S, Gillet R, Giudice E

EMDB-12261:
Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.
Method: single particle / : Giudice E, Mansour M

PDB-7nbu:
Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.
Method: single particle / : Giudice E, Mansour M, Chat S, D'Urso G, Gillet R, Genevaux P

EMDB-25026:
Anaphase Promoting Complex delta APC7
Method: single particle / : Ferguson CJ, Brown NG, Prabu JR, Watson ER, Schulman BA, Bonni A

EMDB-25027:
Anaphase Promoting Complex delta APC7 + UBE2C,substrate,UbV,CDH1
Method: single particle / : Ferguson CJ, Brown NG, Prabu JR, Watson ER, Schulman BA, Bonni A

EMDB-11710:
Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G

EMDB-11713:
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G

EMDB-11717:
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G

EMDB-11718:
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G

PDB-7abz:
Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R

PDB-7ac7:
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R

PDB-7acj:
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R

PDB-7acr:
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Method: single particle / : Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R

EMDB-23211:
Cryo-EM structure of human ACE2 receptor bound to protein encoded by vaccine candidate BNT162b1
Method: single particle / : Lees JA, Han S

EMDB-23215:
Cryo-EM structure of protein encoded by vaccine candidate BNT162b2
Method: single particle / : Lees JA, Han S

PDB-7l7f:
Cryo-EM structure of human ACE2 receptor bound to protein encoded by vaccine candidate BNT162b1
Method: single particle / : Lees JA, Han S

PDB-7l7k:
Cryo-EM structure of protein encoded by vaccine candidate BNT162b2
Method: single particle / : Lees JA, Han S

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more