[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 854 items for (author: cui & j)

EMDB-39027:
Cryo-EM structure of the monomeric SPARSA gRNA-ssDNA complex
Method: single particle / : Zhang JT, Cui N, Wei XY, Jia N

EMDB-39028:
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA complex
Method: single particle / : Zhang JT, Cui N, Wei XY, Jia N

EMDB-39030:
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA-NAD+ complex
Method: single particle / : Zhang JT, Cui N, Wei XY, Jia N

EMDB-39031:
Cryo-EM structure of the monomeric SPARSA complex
Method: single particle / : Zhang JT, Cui N, Wei XY, Jia N

PDB-8y7z:
Cryo-EM structure of the monomeric SPARSA gRNA-ssDNA complex
Method: single particle / : Zhang JT, Cui N, Wei XY, Jia N

PDB-8y80:
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA complex
Method: single particle / : Zhang JT, Cui N, Wei XY, Jia N

PDB-8y82:
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA-NAD+ complex
Method: single particle / : Zhang JT, Cui N, Wei XY, Jia N

EMDB-42636:
Cryo-EM structure of DNMT3A1 UDR in complex with H2AK119Ub-nucleosome
Method: single particle / : Gretarsson K, Abini-Agbomson S, Armache KJ, Lu C

PDB-8uw1:
Cryo-EM structure of DNMT3A1 UDR in complex with H2AK119Ub-nucleosome
Method: single particle / : Gretarsson K, Abini-Agbomson S, Armache KJ, Lu C

EMDB-37157:
State 2 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8keh:
State 2 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-41766:
CryoEM structure of D2 dopamine receptor in complex with GoA KE mutant, scFv16, and dopamine
Method: single particle / : Krumm BE, Kapolka NJ, Fay JF, Roth BL

EMDB-41776:
CryoEM structure of D2 dopamine receptor in complex with GoA KE mutant and dopamine
Method: single particle / : Krumm BE, Kapolka NJ, Fay JF, Roth BL

PDB-8tzq:
CryoEM structure of D2 dopamine receptor in complex with GoA KE Mutant, scFv16, and dopamine
Method: single particle / : Krumm BE, Kapolka NJ, Fay JF, Roth BL

PDB-8u02:
CryoEM structure of D2 dopamine receptor in complex with GoA KE mutant and dopamine
Method: single particle / : Krumm BE, Kapolka NJ, Fay JF, Roth BL

EMDB-37139:
Structure of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37143:
The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37144:
Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37145:
The local refined map of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37160:
Monomer state of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37161:
Monomer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37162:
Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37163:
The local refined map of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37164:
State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37165:
Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdm:
Structure of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdr:
The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kds:
Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdt:
The local refined map of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kej:
Monomer state of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kek:
Monomer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8keo:
Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kep:
The local refined map of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8keq:
State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8ker:
Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37441:
FCP tetramer in Chaetoceros gracilis
Method: single particle / : Feng Y, Li Z, Zhou C, Shen JR, Liu C, Wang W

EMDB-37442:
FCP pentamer in Chaetoceros gracilis
Method: single particle / : Feng Y, Li Z, Zhou C, Liu C, Shen JR, Wang W

PDB-8wck:
FCP tetramer in Chaetoceros gracilis
Method: single particle / : Feng Y, Li Z, Zhou C, Shen JR, Liu C, Wang W

PDB-8wcl:
FCP pentamer in Chaetoceros gracilis
Method: single particle / : Feng Y, Li Z, Zhou C, Liu C, Shen JR, Wang W

EMDB-39645:
The structure of HKU1-B S protein with bsAb1
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-39646:
the complex structure of the H4B6 Fab with the RBD of Omicron BA.5 S protein
Method: single particle / : Xia LY, Zhang YY, Zhou Q, Yan RH

PDB-8yww:
The structure of HKU1-B S protein with bsAb1
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8ywx:
the complex structure of the H4B6 Fab with the RBD of Omicron BA.5 S protein
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38617:
SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab
Method: single particle / : Tong Z, Cui Y, Xie Y, Tong J, Gao GF, Qi J

EMDB-38618:
SARS-CoV-2 RBD + IMCAS-364 + hACE2
Method: single particle / : Tong Z, Cui Y, Xie Y, Tong J, Gao GF, Qi J

EMDB-38619:
SARS-CoV-2 RBD + IMCAS-364 (Local Refinement)
Method: single particle / : Tong Z, Cui Y, Xie Y, Tong J, Gao GF, Qi J

EMDB-38620:
SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2
Method: single particle / : Tong Z, Cui Y, Xie Y, Tong J, Gao GF, Qi J

EMDB-38621:
SARS-CoV-2 spike + IMCAS-123
Method: single particle / : Tong Z, Cui Y, Xie Y, Tong J, Gao GF, Qi J

EMDB-38823:
Cryo-EM structure of the 123-316 scDb/PT-RBD complex
Method: single particle / : Jia GW, Tong Z, Tong JY, Su ZM

PDB-8xse:
SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab
Method: single particle / : Tong Z, Cui Y, Xie Y, Tong J, Gao GF, Qi J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more