[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 96 items for (author: chiu & ce)

EMDB-42820:
SARS-CoV-2 5' proximal stem-loop 5 and 6 with SL5b extended
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42816:
SARS-CoV-1 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyp:
SARS-CoV-1 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-41370:
Structure of a class A GPCR/Fab complex
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41827:
Structure of a class A GPCR/agonist complex (focused map2)
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41828:
Structure of a class A GPCR/agonist complex (focused map1)
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41829:
Structure of a class A GPCR/agonist complex
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-41850:
Structure of a class A GPCR/agonist complex (Consensus map)
Method: single particle / : Sun D, Johnson M, Masureel M

PDB-8tlm:
Structure of a class A GPCR/Fab complex
Method: single particle / : Sun D, Johnson M, Masureel M

PDB-8u1u:
Structure of a class A GPCR/agonist complex
Method: single particle / : Sun D, Johnson M, Masureel M

EMDB-42801:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42802:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 3
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42805:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42808:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 4
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42809:
MERS 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42810:
MERS 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42811:
MERS 5' proximal stem-loop 5, conformation 3
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42818:
SARS-CoV-2 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42819:
SARS-CoV-2 5' proximal stem-loop 5 and 6 with SL5c extended
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42821:
SARS-CoV-2 5' proximal stem-loop 5 and 6
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uye:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyg:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyj:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 4
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyk:
MERS 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyl:
MERS 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uym:
MERS 5' proximal stem-loop 5, conformation 3
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uys:
SARS-CoV-2 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42803:
HCoV-229E 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42813:
HCoV-NL63 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42814:
HCoV-NL63 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-25419:
Previously uncharacterized rectangular bacteria in the dolphin mouth
Method: electron tomography / : Dudek NK, Galaz-Montoya JG, Shi H, Mayer M, Danita C, Celis AI, Wu GH, Behr B, Huang KC, Chiu W, Relman DA

EMDB-27973:
Erwinia amylovora 70S Ribosome
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-27993:
Erwinia amlyavora 50S ribosome
Method: subtomogram averaging / : Prichard A, Lee J, Laughlin TG, Lee A, Thomas K, Sy A, Spencer T, Asavavimol A, Cafferata A, Cameron M, Chiu N, Davydov D, Desai I, Diaz G, Guereca M, Hearst K, Huang L, Jacobs E, Johnson A, Kahn S, Koch R, Martinez A, McDonald-Uyeno A, Norquist M, Pau T, Prasad G, Saam K, Sandu M, Sarabia A, Schumaker S, Sonin A, Zhao A, Corbett A, Pogliano K, Meyer J, Grose J, Villa E, Dutton R, Pogliano J

EMDB-28003:
Erwinia phage vB_EamM_RAY (RAY) Capsid Vertex
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28004:
Erwinia phage vB_EamM_RAY (RAY) Capsid Collar
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28005:
Erwinia phage vB_EamM_RAY (RAY) Tail Sheath
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28006:
Erwinia phage vB_EamM_RAY (RAY) Baseplate
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28007:
Erwinia phage vB_EamM_RAY (RAY) Chimallin
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28008:
Erwinia phage vB_EamM_RAY (RAY) Putative PhuZ Filament
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28009:
Pseudomonas chlororaphis phage 201phi2-1 PhuZ Filament
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28010:
Pseudomonas phage phiKZ PhuZ Filament
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-23892:
Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR promoter DNA (class 1)
Method: single particle / : Saecker RM, Darst SA, Chen J

EMDB-23893:
Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR promoter DNA (class 2)
Method: single particle / : Saecker RM, Darst SA, Chen J

EMDB-23895:
Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR (-5G to C) promoter DNA
Method: single particle / : Saecker RM, Darst SA

EMDB-23897:
Cryo-EM structure of Escherichia coli RNA polymerase bound to T7A1 promoter DNA
Method: single particle / : Saecker RM, Darst SA

EMDB-23662:
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of neutralizing antibodies REGN10985 and REGN10989
Method: single particle / : Zhou Y, Romero Hernandez A, Saotome K, Franklin MC

PDB-7m42:
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of neutralizing antibodies REGN10985 and REGN10989
Method: single particle / : Zhou Y, Romero Hernandez A, Saotome K, Franklin MC

EMDB-23522:
TRiC-substrate complex in ATP/AlFx closed state
Method: single particle / : Knowlton JJ, Gestaut D

EMDB-23526:
Human TRiC/CCT complex with reovirus outer capsid protein sigma-3
Method: single particle / : Knowlton JJ, Gestaut D, Ma B, Taylor G, Seven AB, Leitner A, Wilson GJ, Shanker S, Yates NA, Prasad BVV, Aebersold R, Chiu W, Frydman J, Dermody TS

PDB-7lum:
Human TRiC in ATP/AlFx closed state
Method: single particle / : Knowlton JJ, Gestaut D, Ma B, Taylor G, Seven AB, Leitner A, Wilson GJ, Shanker S, Yates NA, Prasad BVV, Aebersold R, Chiu W, Frydman J, Dermody TS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more