[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 401 items for (author: chi & pl)

EMDB-67147:
Structure of mouse cytoplasmic lattice (CPL) repeating unit
Method: single particle / : Chi PL, Wang X, Li JL, Deng D

EMDB-74146:
Cryo-EM Structure of Human STAT2-USP18-ISG15 Complex
Method: single particle / : Huynh KW, Yamaguchi M

EMDB-52860:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52861:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52879:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52912:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52958:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

EMDB-53025:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

EMDB-53026:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-53237:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

PDB-9igw:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9igx:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q80:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q8x:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q9f:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

PDB-9qcr:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

PDB-9qcs:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9qms:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

EMDB-72178:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER, Lander GC

PDB-9q33:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER

EMDB-52550:
Ku70/80, DNA bound to Polymerase Mu
Method: single particle / : Chaplin AK, Amin H

PDB-9i04:
Ku70/80, DNA bound to Polymerase Mu
Method: single particle / : Chaplin AK, Amin H

EMDB-70613:
Cryo-EM structure of rhesus antibody V033-Int1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9omg:
Cryo-EM structure of rhesus antibody V033-a.I1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-54584:
Arabidopsis thaliana TPLATE complex negative stain EM map
Method: single particle / : Kraus JM, Van Damme D, Pleskot R, Neubergerova M

EMDB-51865:
RPL13 (eL13)-mutant 80S ribosome from mouse
Method: single particle / : Orgebin E, Astier A, Rinaldi D, Baud'huin M, Plisson-Chastang C

EMDB-53721:
Asymmetric unit of the NE-NPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53722:
Cytoplasmic ring asymmetric unit of the NE-NPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53723:
Inner ring asymmetric unit of the NE-NPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53724:
Nuclear ring asymmetric unit of the NE-NPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53725:
Asymmetric unit of the nNPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53727:
Top nuclear ring asymmetric unit of the nNPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53728:
Inner ring asymmetric unit of the nNPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53729:
Bottom nuclear ring asymmetric unit of the nNPC in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53731:
Nuclear pore complex in the nuclear envelope (NE-NPC) in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells, composite structure
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53732:
Nuclear pore complex in nucleoplasmic membranes (nNPC) in S. cerevisiae Not4 deletion Nup188::GFP Nup170::mars cells, composite structure
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53739:
Asymmetric unit of the NE-NPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53740:
Cytoplasmic ring asymmetric unit of the NE-NPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53741:
Inner ring asymmetric unit of the NE-NPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53742:
Nuclear ring asymmetric unit of the NE-NPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53743:
Nuclear basket asymmetric unit of the NE-NPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53744:
Asymmetric unit of the cNPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53745:
Top cytoplasmic ring asymmetric unit of the cNPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53746:
Inner ring asymmetric unit of the cNPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53747:
Bottom cytoplasmic ring asymmetric unit of the cNPC in D. melanogaster Nup358::VN/Nup358::VC cells
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53750:
Nuclear pore complex in the nuclear envelope (NE-NPC) in D. melanogaster Nup358::VN/Nup358::VC cells, composite structure
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-53751:
Nuclear pore complex in cytoplasmic membranes (cNPC) in D. melanogaster Nup358::VN/Nup358::VC cells, composite structure
Method: subtomogram averaging / : Sachweh J, Beck M

EMDB-52999:
HER2/ErbB2 extracellular domain (ECD) from a near full-length construct solubilized in amphipols.
Method: single particle / : Gragera M, Buschiazzo A, Vacca S

PDB-9qbh:
HER2/ErbB2 extracellular domain (ECD) from a near full-length construct solubilized in amphipols.
Method: single particle / : Gragera M, Buschiazzo A, Vacca S

EMDB-51249:
DNA-PK Ku80 mediated dimer bound to DNA polymerase Lambda and DNA ligase 4/XRCC4
Method: single particle / : Chaplin AK, Amin H, Zahid S, Hardwick SW

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more