[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,174 items for (author: chan & sh)

EMDB-72206:
Cryo-EM structure of PGT121 Fab and Rhesus macaque Ab4 Fab in complex with HIV-1 Env trimer BG505 SOSIP.664
Method: single particle / : Chandravanshi M, Tolbert WD, Pazgier M

PDB-9q3s:
Cryo-EM structure of PGT121 Fab and Rhesus macaque Ab4 Fab in complex with HIV-1 Env trimer BG505 SOSIP.664
Method: single particle / : Chandravanshi M, Tolbert WD, Pazgier M

EMDB-72094:
Cryo-EM structure of PGT121 Fab and Rhesus macaque Ab76 Fab in complex with HIV-1 Env trimer BG505 SOSIP.664
Method: single particle / : Chandravanshi M, Tolbert WD, Pazgier M

PDB-9q09:
Cryo-EM structure of PGT121 Fab and Rhesus macaque Ab76 Fab in complex with HIV-1 Env trimer BG505 SOSIP.664
Method: single particle / : Chandravanshi M, Tolbert WD, Pazgier M

EMDB-67623:
Cryo-EM structure of DddT in closed substrate-free conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67625:
Cryo-EM structure of DddT G101D in substrate-free outward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67626:
Cryo-EM structure of DddT in closed DMSP-bound conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67627:
Cryo-EM structure of DddT in closed substrate-free conformation in the presence of potassium ions and dimethylsulfoniopropionate
Method: single particle / : Zhu WJ, Wang P

EMDB-67628:
Cryo-EM structure of DddT G101D in substrate-free inward open conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21ff:
Cryo-EM structure of DddT in closed substrate-free conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fh:
Cryo-EM structure of DddT G101D in substrate-free outward open conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fi:
Cryo-EM structure of DddT in closed DMSP-bound conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fj:
Cryo-EM structure of DddT in closed substrate-free conformation in the presence of potassium ions and dimethylsulfoniopropionate
Method: single particle / : Zhu WJ, Wang P

PDB-21fk:
Cryo-EM structure of DddT G101D in substrate-free inward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-71745:
Composite map of hypomethylated 80S ribosome treated with hygromycin B
Method: single particle / : Zhao Y, Li H

PDB-9pn5:
Composite map of hypomethylated 80S ribosome treated with hygromycin B
Method: single particle / : Zhao Y, Li H

EMDB-71831:
Bacillus subtilis teneurin-like protein
Method: single particle / : Low YS, Landsberg MJL

PDB-9pt5:
Bacillus subtilis teneurin-like protein
Method: single particle / : Low YS, Landsberg MJL

EMDB-65442:
Cryo-EM Structure of Nipah Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65444:
Cryo-EM Structure of Measles Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65445:
Cryo-EM Structure of Nipah Virus Polymerase in complex with GL22
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65446:
Cryo-EM structure of Measles Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65447:
Cryo-EM Structure of Peste Des Petits Ruminants Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65448:
Cryo-EM structure of Peste Des Petits Ruminants Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-68072:
Cryo-EM Structure of Nipah Virus Polymerase in complex with G671
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-21xo:
Cryo-EM Structure of Nipah Virus Polymerase in complex with G671
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxv:
Cryo-EM Structure of Nipah Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxx:
Cryo-EM Structure of Measles Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxy:
Cryo-EM Structure of Nipah Virus Polymerase in complex with GL22
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxz:
Cryo-EM structure of Measles Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vy0:
Cryo-EM Structure of Peste Des Petits Ruminants Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vy1:
Cryo-EM structure of Peste Des Petits Ruminants Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-64402:
Cryo-EM strucutre of CXCR4 complexed with agonist SDV1a
Method: single particle / : Jiao HZ, Sang XH, Huang ZW, Hu HL

EMDB-64403:
Cryo-EM structure of CXCR4 complexed with agonist SDVX1
Method: single particle / : Jiao HZ, Sang XH, Huang ZW, Hu HL

PDB-9upu:
Cryo-EM strucutre of CXCR4 complexed with agonist SDV1a
Method: single particle / : Jiao HZ, Sang XH, Huang ZW, Hu HL

PDB-9upv:
Cryo-EM structure of CXCR4 complexed with agonist SDVX1
Method: single particle / : Jiao HZ, Sang XH, Huang ZW, Hu HL

EMDB-53451:
80S rabbit ribosome in complex with alpha-1-antitrypsin nascent chain on the P-site tRNA
Method: single particle / : Plessa E, Mitropoulou AN, Christodoulou J, Cabrita LD

EMDB-55586:
Local refinement of RNA-free assembled Langya virus N-core
Method: single particle / : Jayachandran RB, Quignon E, Renner M

EMDB-55587:
Helical reconstruction of Langya henipavirus N-core nucleocapsid-like complex
Method: helical / : Jayachandran RB, Quignon E, Renner M

EMDB-55588:
Langya henipavirus Ncore 13mer Ring
Method: single particle / : Jayachandran RB, Quignon E, Renner M

PDB-9t5k:
Local refinement of RNA-free assembled Langya virus N-core
Method: single particle / : Jayachandran RB, Quignon E, Renner M

PDB-9t5l:
Helical reconstruction of Langya henipavirus N-core nucleocapsid-like complex
Method: helical / : Jayachandran RB, Quignon E, Renner M

EMDB-71550:
Structure of beta-1,3-glucan synthase in complex with caspofungin, Rho1 and long glucan
Method: single particle / : Ren Z, Lee SY

EMDB-71551:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) in complex with short glucan
Method: single particle / : Ren Z, Lee SY

EMDB-71552:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically relevant ground state
Method: single particle / : Ren Z, Lee SY

EMDB-71553:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically less relevant L2 state
Method: single particle / : Ren Z, Lee SY

EMDB-71554:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically less relevant L1 state
Method: single particle / : Ren Z, Lee SY

EMDB-74746:
Beta-1,3-glucan synthase Fks1 S643P from Saccharomyces Cerevisiae
Method: single particle / : Ren Z, Lee SY

PDB-9pe1:
Structure of beta-1,3-glucan synthase in complex with caspofungin, Rho1 and long glucan
Method: single particle / : Ren Z, Lee SY

PDB-9pe2:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) in complex with short glucan
Method: single particle / : Ren Z, Lee SY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more