[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 627 items for (author: borg & a)

EMDB-57973:
E. coli 50S ribosome with peptidyl-tRNA and Hsp15
Method: single particle / : Larsson DSD, Akbar S, Selmer M

EMDB-57974:
E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15
Method: single particle / : Larsson DSD, Akbar S, Selmer M

EMDB-57975:
E. coli 70S ribosome with peptidyl-tRNA and Hsp15
Method: single particle / : Larsson DSD, Akbar S, Selmer M

EMDB-71550:
Structure of beta-1,3-glucan synthase in complex with caspofungin, Rho1 and long glucan
Method: single particle / : Ren Z, Lee SY

EMDB-71551:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) in complex with short glucan
Method: single particle / : Ren Z, Lee SY

EMDB-71552:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically relevant ground state
Method: single particle / : Ren Z, Lee SY

EMDB-71553:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically less relevant L2 state
Method: single particle / : Ren Z, Lee SY

EMDB-71554:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically less relevant L1 state
Method: single particle / : Ren Z, Lee SY

EMDB-74746:
Beta-1,3-glucan synthase Fks1 S643P from Saccharomyces Cerevisiae
Method: single particle / : Ren Z, Lee SY

PDB-9pe1:
Structure of beta-1,3-glucan synthase in complex with caspofungin, Rho1 and long glucan
Method: single particle / : Ren Z, Lee SY

PDB-9pe2:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) in complex with short glucan
Method: single particle / : Ren Z, Lee SY

PDB-9pe3:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically relevant ground state
Method: single particle / : Ren Z, Lee SY

PDB-9pe4:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically less relevant L2 state
Method: single particle / : Ren Z, Lee SY

PDB-9pe5:
Structure of beta-1,3-glucan synthase from Saccharomyces cerevisiae (ScFks1) at the catalytically less relevant L1 state
Method: single particle / : Ren Z, Lee SY

PDB-9ztc:
Beta-1,3-glucan synthase Fks1 S643P from Saccharomyces Cerevisiae
Method: single particle / : Ren Z, Lee SY

EMDB-49800:
CryoEM analysis of Phosphoglucose isomerase from P. aeruginosa reveals potential clinically relevant features
Method: single particle / : Sharma K, Borgnia JM

PDB-9nuc:
CryoEM analysis of Phosphoglucose isomerase from P. aeruginosa reveals potential clinically relevant features
Method: single particle / : Sharma K, Borgnia JM

EMDB-52634:
Single particle cryo electron microscopy of a Fab fragment bound to recombinant human CD40 ligand
Method: single particle / : Kristoffersen EL, Schinkel T, Andersen ES

PDB-9i5n:
Single particle cryo electron microscopy of a Fab fragment bound to recombinant human CD40 ligand
Method: single particle / : Kristoffersen EL, Schinkel T, Andersen ES

EMDB-53314:
3D cryoEM map of the BSAP-1 and B1RS complex
Method: single particle / : Pasveer EL, Remaut HK

EMDB-49363:
Cryo-EM map of the inactive conformation of a glycoside hydrolase (CapGH2b) from the GH2 family
Method: single particle / : Martins MP, Dolce LG, Santos CR, Murakami MT

EMDB-49364:
Active conformation of a redox-regulated glycoside hydrolase (CapGH2b) from the GH2 family
Method: single particle / : Martins MP, Santos CR, Dolce LG, Murakami MT

PDB-9nfe:
Active conformation of a redox-regulated glycoside hydrolase (CapGH2b) from the GH2 family
Method: single particle / : Martins MP, Santos CR, Dolce LG, Murakami MT

EMDB-48123:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin I subunit B (Stx1B) Complexed with Equine Polyclonal Fab Fragments (Complex 1)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-48124:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin I subunit B (Stx1B) Complexed with Equine Polyclonal Fab Fragments (Complex 2)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-48125:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin I subunit B (Stx1B) Complexed with Equine Polyclonal Fab Fragments (Complex 3)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-48126:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin II subunit B (Stx2B) Complexed with Equine Polyclonal Fab Fragments (Complex 1)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-48127:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin II subunit B (Stx2B) Complexed with Equine Polyclonal Fab Fragments (Complex 2)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-48128:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin II subunit B (Stx2B) Complexed with Equine Polyclonal Fab Fragments (Complex 3)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-48129:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin II subunit B (Stx2B) Complexed with Equine Polyclonal Fab Fragments (Complex 4)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-48130:
Cryo-EM Map of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin II subunit B (Stx2B) Complexed with Equine Polyclonal Fab Fragments (Complex 5)
Method: single particle / : Cristofalo AE, Sharma A, Cerutti ML, Sharma K, Melero R, Zylberman V, Goldbaum FA, Borgnia MJ, Otero LH

EMDB-54278:
Electron tomogram of resin-embedded, apoptosis-induced HeLa cell expressing Apaf1-GFP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-54279:
Cryo-electron tomogram of apoptosis-induced HeLa cell expressing Apaf1-GFP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-54280:
Cryo-electron tomogram of apoptosis-induced HeLa cell expressing Apaf1-SNAP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-54281:
Electron tomogram of resin-embedded, apoptosis-induced HeLa cell expressing Apaf1-GFP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-70103:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70104:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70105:
Cryo-EM Non-Uniform Refinement Map of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70106:
Cryo-EM Local Refinement Map (GA3-GID1A-RGA) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70107:
Cryo-EM Local Refinement Map (SLY1-ASK1) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70510:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70511:
Cryo-EM Non-Uniform Refinement Map of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70512:
Cryo-EM Local Refinement Map (GA3-GID1A-RGA) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70513:
Cryo-EM Local Refinement Map (SLY1-ASK1) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

PDB-9o4j:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

PDB-9o4k:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

PDB-9oi8:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-45456:
CryoEM Structure of Escherichia coli FimCH in complex with 2H04 Fab
Method: single particle / : Lopatto EDB, Hultgren SJ

EMDB-45457:
CryoEM Structure of Escherichia coli FimCH in complex with B7 Fab
Method: single particle / : Lopatto EDB, Hultgren SJ

EMDB-45458:
CryoEM Structure of Escherichia coli FimCH in complex with F7 Fab
Method: single particle / : Lopatto EDB, Hultgren SJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more