[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,135 items for (author: ban & n)

EMDB-58198:
Structure of native human leukocyte myeloperoxidase
Method: single particle / : Leitgeb U, Pfanzagl V, Guo Y, Emde T, Borek D

PDB-31ak:
Structure of native human leukocyte myeloperoxidase
Method: single particle / : Leitgeb U, Pfanzagl V, Guo Y, Emde T, Borek D

EMDB-57771:
Ternary complex of translating ribosome, NAC and NatB
Method: single particle / : Knejski P, Scaiola A, Leibundgut M, Ban N

PDB-30hi:
Ternary complex of translating ribosome, NAC and NatB
Method: single particle / : Knejski P, Scaiola A, Leibundgut M, Ban N

EMDB-69194:
Cryo-EM structure of Arabidopsis nucleosome
Method: single particle / : Haga J, Takasuka TE

EMDB-69245:
Cryo-EM structure of Arabidopsis H3-H4 octasome class1
Method: single particle / : Haga J, Takasuka TE

EMDB-69246:
Cryo-EM structure of Arabidopsis H3-H4 octasome class2
Method: single particle / : Haga J, Takasuka TE

EMDB-69247:
Cryo-EM structure of Arabidopsis H3-H4 octasome class3
Method: single particle / : Haga J, Takasuka TE

EMDB-69254:
Cryo-EM structure of Arabidopsis H3-H4 octasome class4
Method: single particle / : Haga J, Takasuka TE

EMDB-69255:
Cryo-EM structure of Arabidopsis H3-H4 octasome class5
Method: single particle / : Haga J, Takasuka TE

EMDB-69668:
Cryo-EM structure of Arabidopsis H3-H4 octasome
Method: single particle / : Haga J, Takasuka TE

EMDB-76071:
Cryo-EM structure of dimeric Nitrogenase MoFe protein from Methanosarcina acetivorans
Method: single particle / : Kashyap R, Antony E

EMDB-55008:
Zuzalysin bi-pentamer
Method: single particle / : Rodriguez-Banqueri A, Gomis Ruth FX, Eckhard U, Potempa J, Glatt S, Koziej L, Madej M

EMDB-55035:
Zuzalysin zymogen dodecahedral complex E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J, Gomis Ruth FX, Koziej L

PDB-9sln:
Zuzalysin bi-pentamer cryo-em
Method: single particle / : Rodriguez-Banqueri A, Gomis Ruth FX, Eckhard U, Potempa J, Glatt S, Koziej L, Madej M

PDB-9smj:
Zuzalysin zymogen dodecahedral complex E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J

EMDB-55005:
Zuzalysin pentamer cryo-em
Method: single particle / : Rodriguez-Banqueri A, Gomis Ruth FX, Eckhard U, Potempa J, Glatt S, Koziej L, Madej M

EMDB-55026:
Zuzalysin active dodecahedral complex
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Koziej L, Glatt S, Potempa J, Gomis Ruth FX

EMDB-55028:
Zuzalysin zymogen pentamer E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J, Gomis Ruth FX, Koziej L

PDB-9sll:
Zuzalysin active pentamer
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Koziej L, Glatt S, Potempa J, Gomis Ruth FX

PDB-9sm4:
Zuzalysin active dodecahedral complex
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Koziej L, Glatt S, Potempa J, Gomis Ruth FX

PDB-9sm8:
Zuzalysin zymogen pentamer E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J, Gomis Ruth FX

EMDB-49111:
Yeast TIM23 complex inhibited by stendomycin
Method: single particle / : Park E

PDB-9n84:
Yeast TIM23 complex inhibited by stendomycin
Method: single particle / : Park E

EMDB-81900:
Cryo-EM structure of canonical human nucleosome.
Method: single particle / : Okimune KI, Azuma T, Takasuka TE

EMDB-81902:
Cryo-EM structure of canonical human nucleosome in the presence of 1 mM magnesium chloride
Method: single particle / : Okimune KI, Azuma T, Takasuka ET

EMDB-81903:
Cryo-EM structure of H3.3-containing human nucleosome.
Method: single particle / : Okimune KI, Azuma T, Takasuka ET

EMDB-81904:
Cryo-EM structure of H3.X-containing human nucleosome.
Method: single particle / : Okimune KI, Azuma T, Takasuka ET

EMDB-47384:
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
Method: single particle / : Majumdar S, Ojha AK, Agrawal RK

EMDB-47419:
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
Method: single particle / : Majumdar S, Ojha AK, Agrawal RK

EMDB-47876:
Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
Method: single particle / : Majumdar S, Ojha AK, Agrawal RK

EMDB-47899:
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
Method: single particle / : Majumdar S, Ojha AK, Agrawal RK

EMDB-47909:
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to Mycobacterium tuberculosis C- 70S ribosome
Method: single particle / : Majumdar S, Ojha AK, Agrawal RK

EMDB-47910:
Cryo-EM structure of the Mycobacterium tuberculosis C- 70S ribosome bound to fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites
Method: single particle / : Majumdar S, Ojha AK, Agrawal RK

EMDB-69918:
Xanthomonas citri pv. glycines 50S subunit
Method: single particle / : Sengupta S, Anand R

PDB-24yw:
Xanthomonas citri pv. glycines 50S subunit
Method: single particle / : Sengupta S, Anand R

EMDB-53928:
Cryo-EM structure of amyloidogenic antimicrobial peptide Aurein 1.2 polymorph 1 in acqueous solution
Method: helical / : Ragonis-Bachar P, Strati F, Gustavsson E, Khokhlov A, Barnea E, Rayan B, Upchr A, Landau M, Banerjee S

EMDB-53942:
Cryo-EM structure of amyloidogenic antimicrobial peptide aurein 1.2 polymorph 2 in aqueous solution
Method: helical / : Ragonis-Bachar P, Strati F, Gustavsson E, Khokhlov A, Barnea E, Rayan B, Upchr A, Landau M, Banerjee S

PDB-9rd7:
Cryo-EM structure of amyloidogenic antimicrobial peptide Aurein 1.2 polymorph 1 in acqueous solution
Method: helical / : Ragonis-Bachar P, Strati F, Gustavsson E, Khokhlov A, Barnea E, Rayan B, Upchr A, Landau M, Banerjee S

PDB-9rfv:
Cryo-EM structure of amyloidogenic antimicrobial peptide aurein 1.2 polymorph 2 in aqueous solution
Method: helical / : Ragonis-Bachar P, Strati F, Gustavsson E, Khokhlov A, Barnea E, Rayan B, Upchr A, Landau M, Banerjee S

EMDB-57643:
Dynein-Dynactin-RAB11FIP3 complex - composite
Method: single particle / : d'Amico EA, Carter AP

EMDB-69516:
In-cell map of mitoribosome from T cells of middle-aged patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, San J

EMDB-69519:
Tomogram of mitochondria in T cell from middle-aged patients after restimulation
Method: electron tomography / : Zhang X, Sang J, Su L, Pan B

EMDB-69521:
Tomogram of mitochondria in T cell from older patients after restimulation
Method: electron tomography / : Zhang X, Sang J, Su L, Pan B

EMDB-69523:
In-cell map of mitoribosome from T cells of older patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-69526:
In-cell map of electron transport chain supercomplex from T cells of middle-aged patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-69528:
In-cell map of electron transport chain supercomplex from T cells of older patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-54659:
Cryo-EM structure of Rat NHE6 D293A variant
Method: single particle / : Jung S, Gulati A, Reichenbach T, Kokane S, Yeo H, Drew D

EMDB-54660:
Cryo-EM structure of Rat NHE6 in detergent
Method: single particle / : Yeo H, Jung S, Reichenbach T, Kokane S, Gulati A, Drew D

EMDB-54661:
Cryo-EM structure of Rat NHE6 in nanodisc
Method: single particle / : Yeo H, Jung S, Reichenbach T, Kokane S, Gulati A, Drew D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more