[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 45 items for (author: bachmann & g)

EMDB-50751:
Cryo-EM structure of the type 1 pilus rod as part of the FimA-bound usher complex (FimDHGFAnC)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50755:
Cryo-EM map of the type 1 pilus complex including pilus rod and FimA-bound assembly platform
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50773:
Cryo-EM map of the type 1 chaperone-usher pilus tip and rod - Conformer 1
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50796:
Cryo-EM map of the type 1 chaperone-usher pilus tip and rod - Conformer 2
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50806:
Cryo-EM map of the type 1 chaperone-usher pilus tip and rod - Conformer 3
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50809:
Cryo-EM map of the type 1 chaperone-usher pilus tip and rod - Conformer 4
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50810:
Cryo-EM map of the type 1 pilus complex including pilus rod and FimI-bound assembly platform
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50812:
Cryo-EM map of the type 1 pilus complex including pilus rod and FimI-bound assembly platform after incorporation of two FimI subunits
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50828:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimA-bound chaperone-usher pilus complex (FimDHGFAnC - body 2)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50829:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimA-bound chaperone-usher pilus complex (Local refinement including FimD, FimC, FimAn and FimAn-1)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50839:
Cryo-EM structure of the type 1 pilus tip-to-rod transition
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50843:
Cryo-EM structure of the FimI-bound type 1 pilus assembly platform complex - Local refinement
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50846:
Cryo-EM structure of the type 1 pilus rod as part of the FimI-bound usher complex (FimDHGFAnIC - body 1)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50847:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimI-bound chaperone-usher pilus complex (FimDHGFAnIC - body 2)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50853:
Cryo-EM structure of the type 1 pilus complex including pilus rod and FimI-bound assembly platform after incorporation of two FimI subunits - Local refinement
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50861:
Cryo-EM structure of the type 1 chaperone-usher pilus FimD-tip complex (FimDHGFC) - Conformer 1
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50954:
Cryo-EM map of the type 1 chaperone-usher pilus FimD-tip complex - Conformer 2
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9ftt:
Cryo-EM structure of the type 1 pilus rod as part of the FimA-bound usher complex (FimDHGFAnC)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fw9:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimA-bound chaperone-usher pilus complex (FimDHGFAnC - body 2)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fwb:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimA-bound chaperone-usher pilus complex (Local refinement including FimD, FimC, FimAn and FimAn-1)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fx0:
Cryo-EM structure of the type 1 pilus tip-to-rod transition
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fx8:
Cryo-EM structure of the FimI-bound type 1 pilus assembly platform complex - Local refinement
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fxa:
Cryo-EM structure of the type 1 pilus rod as part of the FimI-bound usher complex (FimDHGFAnIC - body 1)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fxb:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimI-bound chaperone-usher pilus complex (FimDHGFAnIC - body 2)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fxs:
Cryo-EM structure of the type 1 pilus complex including pilus rod and FimI-bound assembly platform after incorporation of two FimI subunits - Local refinement
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fy9:
Cryo-EM structure of the type 1 chaperone-usher pilus FimD-tip complex (FimDHGFC) - Conformer 1
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-50838:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimA-bound chaperone-usher pilus complex (Local refinement including FimD, FimC, FimAn, FimAn-1 and FimAn-2)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

PDB-9fwz:
Cryo-EM structure of the type 1 pilus assembly platform as part of the FimA-bound chaperone-usher pilus complex (Local refinement including FimD, FimC, FimAn, FimAn-1 and FimAn-2)
Method: single particle / : Bachmann P, Afanasyev P, Boehringer D, Glockshuber R

EMDB-17863:
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod
Method: helical / : Hospenthal M, Zyla D, Glockshuber R, Waksman G

EMDB-17878:
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M, Glockshuber R, Waksman G

PDB-8psv:
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod
Method: helical / : Hospenthal M, Zyla D, Glockshuber R, Waksman G

PDB-8ptu:
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M, Glockshuber R, Waksman G

EMDB-23763:
The F1 region of ammocidin-bound Saccharomyces cerevisiae ATP synthase
Method: single particle / : Guo H, Rubinstein JL

EMDB-23764:
The F1 region of apoptolidin-bound Saccharomyces cerevisiae ATP synthase
Method: single particle / : Guo H, Rubinstein JL

EMDB-23765:
The F1 region of inhibitor-free Saccharomyces cerevisiae ATP synthase
Method: single particle / : Guo H, Rubinstein JL

PDB-7md2:
The F1 region of ammocidin-bound Saccharomyces cerevisiae ATP synthase
Method: single particle / : Guo H, Rubinstein JL

PDB-7md3:
The F1 region of apoptolidin-bound Saccharomyces cerevisiae ATP synthase
Method: single particle / : Guo H, Rubinstein JL

EMDB-10721:
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M

PDB-6y7s:
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M, Waksman G, Glockshuber R

EMDB-11327:
Oligomer structure of dimeric amyloid-beta variant dimAb
Method: single particle / : Schuetzmann MP, Hasecke F, Bachmann S, Zielinski M, Haensch S, Schroeder GF, Zempel H, Hoyer W

EMDB-3855:
CryoEM structure of recombinant CMV particles with Tetanus-epitope
Method: single particle / : Kotecha A, Stuart DI

PDB-5ow6:
CryoEM structure of recombinant CMV particles with Tetanus-epitope
Method: single particle / : Kotecha A, Stuart DI, Backmann M

EMDB-8396:
Asymmetric reconstruction of bacteriophage MS2 mutant NEO1
Method: single particle / : Guerrero-Ferreira RC, Nazarov SY, Zhong Q, Kohn T, Leiman PG

EMDB-8360:
Asymmetric reconstruction of bacteriophage MS2
Method: single particle / : Nazarov SU, Guerrero-Ferreira RC, Zhong Q, Kohn T, Leiman PG

EMDB-3384:
A closed conformation of the C. elegans separase-securin complex
Method: single particle / : Bachmann G, Morris E, Bayliss R

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more