[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,346 items for (author: albert & b)

EMDB-71415:
Yeast Respiratory SuperComplex - deltaQCR6
Method: single particle / : Baker ML

EMDB-71416:
Yeast Respiratory SuperComplex - non uniform refinement
Method: single particle / : Baker ML

EMDB-48337:
FnoCas12a bridge helix variant state 1
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48338:
FnoCas12a bridge helix variant state 2
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48339:
FnoCas12a bridge helix variant state 3
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48340:
FnoCas12a bridge helix variant state 4a
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48341:
FnoCas12a bridge helix variant state 4b
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkt:
FnoCas12a bridge helix variant state 1
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mku:
FnoCas12a bridge helix variant state 2
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkv:
FnoCas12a bridge helix variant state 3
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkw:
FnoCas12a bridge helix variant state 4a
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkx:
FnoCas12a bridge helix variant state 4b
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-51273:
Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51274:
Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment and 5-mer RNA
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51275:
Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and ompU promoter DNA
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51276:
Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51277:
Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51278:
Cryo-EM structure of Vibrio cholerae RNA polymerase dimer with ToxR and TcpP transcription factors and a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51774:
Consensus map of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and bound to an ompU promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51775:
Focused map #1 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and bound to an ompU promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51776:
Focused map #2 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and bound to an ompU promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51948:
Consensus map of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and bound to a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51949:
Focused map #1 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and bound to a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51950:
Focused map #2 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and bound to a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51955:
Consensus map of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and bound to a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51956:
Focused map #1 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and bound to a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-51958:
Focused map #2 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and bound to a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

PDB-9gdo:
Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

PDB-9gdp:
Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment and 5-mer RNA
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

PDB-9gdq:
Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and ompU promoter DNA
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

PDB-9gdr:
Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

PDB-9gds:
Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and a toxT promoter DNA fragment
Method: single particle / : Alcaide-Jimenez A, Baudin F, Canals A, Machon C, Murciano B, Fabrega-Ferrer M, Bantysh O, Perez-Luque R, Krukonis ES, Muller CW, Coll M

EMDB-55761:
Cryo-EM map of mouse heavy chain apoferritin
Method: single particle / : Haubner M, Williams HM, Hruby J, Guskov A, Kovalev K, Drabbels M, Lorenz UJ, Straub MS

EMDB-55765:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

EMDB-55766:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the K2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

EMDB-55769:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the O2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

PDB-9tbd:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

PDB-9tbe:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the K2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

PDB-9tbf:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the O2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

EMDB-72471:
His-tagged beta galactosidase (LacZ) on a Ni-NTA lipid monolayer grid
Method: single particle / : Baker RW, Strauss JD

PDB-9y45:
His-tagged beta galactosidase (LacZ) on a Ni-NTA lipid monolayer grid
Method: single particle / : Baker RW, Strauss JD

EMDB-51252:
RNAP-TopoI complex on duplex scaffold - consensus map
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51253:
RNAP-TopoI complex on duplex scaffold - focused map (TopoI)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51254:
RNAP-TopoI complex on duplex scaffold - focused map (TopoI D2/D3)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51255:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP core)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51256:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP swivel module 1)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51257:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP swivel module 2)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51258:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP beta protrusion and lobe)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51259:
RNAP-TopoI complex on duplex scaffold
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more