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5VEH
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RE-REFINEMENT OF THE PDB STRUCTURE 1YIZ OF AEDES AEGYPTI KYNURENINE AMINOTRANSFERASE
Descriptor:Kynurenine aminotransferase, BROMIDE ION, GLYCEROL
Authors:Wlodawer, A., Dauter, Z., Minor, W., Stanfield, R., Porebski, P., Jaskolski, M., Pozharski, E., Weichenberger, C.X., Rupp, B.
Deposit date:2017-04-04
Release date:2017-11-29
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VEP
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MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2F
Descriptor:Kynurenine--oxoglutarate transaminase 3, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Wlodawer, A., Dauter, Z., Minor, W., Stanfield, R., Porebski, P., Jaskolski, M., Pozharski, E., Weichenberger, C.X., Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VEQ
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MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2Y
Descriptor:Kynurenine--oxoglutarate transaminase 3, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Wlodawer, A., Dauter, Z., Minor, W., Stanfield, R., Porebski, P., Jaskolski, M., Pozharski, E., Weichenberger, C.X., Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VER
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MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2Z
Descriptor:Kynurenine--oxoglutarate transaminase 3, PYRIDOXAL-5'-PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Wlodawer, A., Dauter, Z., Minor, W., Stanfield, R., Porebski, P., Jaskolski, M., Pozharski, E., Weichenberger, C.X., Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VET
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PHOSPHOLIPASE A2, RE-REFINEMENT OF THE PDB STRUCTURE 1JQ8 WITHOUT THE PUTATIVE COMPLEXED OLIGOPEPTIDE
Descriptor:Phospholipase A2 VRV-PL-VIIIa
Authors:Wlodawer, A., Dauter, Z., Minor, W., Stanfield, R., Porebski, P., Jaskolski, M., Pozharski, E., Weichenberger, C.X., Rupp, B.
Deposit date:2017-04-05
Release date:2018-06-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VF2
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SCFV 2D10 RE-REFINED AS A COMPLEX WITH TREHALOSE REPLACING THE ORIGINAL ALPHA-1,6-MANNOBIOSE
Descriptor:scFv 2D10, TREHALOSE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Porebski, P.J., Wlodawer, A., Dauter, Z., Minor, W., Stanfield, R., Jaskolski, M., Pozharski, E., Weichenberger, C.X., Rupp, B.
Deposit date:2017-04-06
Release date:2017-12-06
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VF5
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CRYSTAL STRUCTURE OF THE VICILIN FROM SOLANUM MELONGENA, RE-REFINEMENT
Descriptor:SM80.1 Vicilin, SODIUM ION, ACETATE ION, ...
Authors:Porebski, P.J., Wlodawer, A., Dauter, Z., Minor, W., Stanfield, R., Jaskolski, M., Pozharski, E., Weichenberger, C.X., Rupp, B.
Deposit date:2017-04-06
Release date:2017-12-06
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
6DZN
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PAN-EBOLAVIRUS HUMAN ANTIBODY ADI-15878 FAB
Descriptor:Antibody ADI-15878, light chain, heavy chain, ...
Authors:Murin, C.D., Ward, A.B., Bruhn, J.F., Stanfield, R.
Deposit date:2018-07-05
Release date:2018-09-12
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of Pan-Ebolavirus Neutralization by an Antibody Targeting the Glycoprotein Fusion Loop.
Cell Rep, 24, 2018
1F58
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IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 24-RESIDUE PEPTIDE (RESIDUES 308-333 OF HIV-1 GP120 (MN ISOLATE) WITH ALA TO AIB SUBSTITUTION AT POSITION 323
Descriptor:PROTEIN (IGG1 ANTIBODY 58.2 (LIGHT CHAIN)), PROTEIN (IGG1 ANTIBODY 58.2 (HEAVY CHAIN)), Envelope glycoprotein gp120
Authors:Stanfield, R.L., Cabezas, E., Satterthwait, A.C., Stura, E.A., Profy, A.T., Wilson, I.A.
Deposit date:1998-10-21
Release date:1999-02-02
Last modified:2018-08-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs.
Structure Fold.Des., 7, 1999
2F58
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IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 12-RESIDUE CYCLIC PEPTIDE (INCLUDING RESIDUES 315-324 OF HIV-1 GP120) (MN ISOLATE)
Descriptor:PROTEIN (IGG1 FAB 58.2 ANTIBODY (LIGHT CHAIN)), PROTEIN (IGG1 FAB 58.2 ANTIBODY (HEAVY CHAIN)), PROTEIN (HIV-1 GP120), ...
Authors:Stanfield, R.L., Cabezas, E., Satterthwait, A.C., Stura, E.A., Profy, A.T., Wilson, I.A.
Deposit date:1998-10-23
Release date:1999-02-09
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs.
Structure Fold.Des., 7, 1999
3F58
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IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 12-RESIDUE CYCLIC PEPTIDE (INCLUDING RESIDUES 315-324 OF HIV-1 GP120 (MN ISOLATE); H315S MUTATION
Descriptor:PROTEIN (IMMUNOGLOBULIN GAMMA I (58.2)), PROTEIN (CYCLIC PEPTIDE (GP120))
Authors:Stanfield, R.L., Cabezas, E., Satterthwait, A.C., Stura, E.A., Profy, A.T., Wilson, I.A.
Deposit date:1998-10-23
Release date:1999-02-09
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs.
Structure Fold.Des., 7, 1999
3T0V
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UNLIGANDED FLUOROGEN ACTIVATING PROTEIN M8VL
Descriptor:immunoglobulin variable lambda domain, PENTAETHYLENE GLYCOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Stanfield, R., Senutovitch, N., Bhattacharyya, S., Rule, G., Wilson, I.A., Armitage, B., Waggoner, A.S., Berget, P.
Deposit date:2011-07-20
Release date:2012-03-21
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Biochemistry, 51, 2012
3T0W
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FLUOROGEN ACTIVATING PROTEIN M8VL IN COMPLEX WITH DIMETHYLINDOLE RED
Descriptor:immunoglobulin variable lambda domain, CHLORIDE ION, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Stanfield, R., Senutovitch, N., Bhattacharyya, S., Rule, G., Wilson, I.A., Armitage, B., Waggoner, A.S., Berget, P.
Deposit date:2011-07-20
Release date:2012-03-21
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Biochemistry, 51, 2012
3T0X
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FLUOROGEN ACTIVATING PROTEIN M8VLA4(S55P) IN COMPLEX WITH DIMETHYLINDOLE RED
Descriptor:Immunoglobulin variable lambda domain M8VLA4(S55P), 1-(3-sulfopropyl)-4-[(1E,3E)-3-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)prop-1-en-1-yl]quinolinium, 1,2-ETHANEDIOL, ...
Authors:Stanfield, R., Senutovitch, N., Bhattacharyya, S., Rule, G., Wilson, I.A., Armitage, B., Waggoner, A.S., Berget, P.
Deposit date:2011-07-20
Release date:2012-03-21
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Biochemistry, 51, 2012
5IHU
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CRYSTAL STRUCTURE OF BOVINE FAB B11
Descriptor:bovine Fab B11 light chain, bovine Fab B11 heavy chain
Authors:Stanfield, R., Wilson, I.
Deposit date:2016-02-29
Release date:2016-10-05
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Conservation and diversity in the ultralong third heavy-chain complementarity-determining region of bovine antibodies.
Sci Immunol, 1, 2016
4KTE
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FAB FRAGMENT OF HIV VACCINE-ELICITED CD4BS-DIRECTED ANTIBODY, GE148, FROM NON-HUMAN PRIMATE
Descriptor:GE148 Heavy Chain Fab, GE148 Light Chain Fab, SULFATE ION, ...
Authors:Poulsen, C., Tran, K., Stanfield, R., Wyatt, R.T.
Deposit date:2013-05-20
Release date:2014-02-05
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Vaccine-elicited primate antibodies use a distinct approach to the HIV-1 primary receptor binding site informing vaccine redesign.
Proc.Natl.Acad.Sci.USA, 111, 2014
5VGA
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ALTERNATIVE MODEL FOR FAB 36-65
Descriptor:Fab 36-65 light chain, Fab 36-65 heavy chain, TRIETHYLENE GLYCOL
Authors:Stanfield, R.L., Rupp, B., Wlodawer, A., Dauter, Z., Porebski, P.J., Minor, W., Jaskolski, M., Pozharski, E., Weichenberger, C.X.
Deposit date:2017-04-10
Release date:2017-12-06
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
6DZL
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EBOLA VIRUS MAKONA VARIANT GP (MUCIN-DELETED) IN COMPLEX WITH PAN-EBOLAVIRUS HUMAN ANTIBODY ADI-15878 FAB
Descriptor:Ebola virus Makona GP1, Ebola virus Makona GP2, Fv domain of ADI-15878 Fab light chain, ...
Authors:Murin, C.D., Ward, A.B.
Deposit date:2018-07-05
Release date:2018-09-12
Last modified:2018-09-19
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Structural Basis of Pan-Ebolavirus Neutralization by an Antibody Targeting the Glycoprotein Fusion Loop.
Cell Rep, 24, 2018
6DZM
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BUNDIBUGYO VIRUS GP (MUCIN-DELETED) IN COMPLEX WITH PAN-EBOLAVIRUS HUMAN ANTIBODY ADI-15878 FAB
Descriptor:Bundibugyo virus GP1, Bundibugyo virus GP2, Antibody ADI-15878 Fab, ...
Authors:Murin, C.D., Ward, A.B.
Deposit date:2018-07-05
Release date:2018-09-12
Last modified:2018-09-19
Method:ELECTRON MICROSCOPY (4.29 Å)
Cite:Structural Basis of Pan-Ebolavirus Neutralization by an Antibody Targeting the Glycoprotein Fusion Loop.
Cell Rep, 24, 2018