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1PER
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THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES
分子名称:DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*GP*TP*TP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*AP*AP*CP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 REPRESSOR)
著者Rodgers, D.W., Harrison, S.C.
登録日1993-11-09
公開日1994-01-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites.
Structure, 1, 1993
1HMV
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THE STRUCTURE OF UNLIGANDED REVERSE TRANSCRIPTASE FROM THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
分子名称:HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), MAGNESIUM ION
著者Rodgers, D.W., Gamblin, S.J., Harris, B.A., Ray, S., Culp, J.S., Hellmig, B., Woolf, D.J., Debouck, C., Harrison, S.C.
登録日1994-12-15
公開日1995-03-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The structure of unliganded reverse transcriptase from the human immunodeficiency virus type 1.
Proc.Natl.Acad.Sci.USA, 92, 1995
2O36
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CRYSTAL STRUCTURE OF ENGINEERED THIMET OLIGOPEPTIDASE WITH NEUROLYSIN SPECIFICITY IN NEUROTENSIN CLEAVAGE SITE
分子名称:Thimet oligopeptidase, ZINC ION
著者Rodgers, D.W., Lim, E.J.
登録日2006-11-30
公開日2007-01-23
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Swapping the substrate specificities of the neuropeptidases neurolysin and thimet oligopeptidase.
J.Biol.Chem., 282, 2007
2O3E
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CRYSTAL STRUCTURE OF ENGINEERED NEUROLYSIN WITH THIMET OLIGOPEPTIDASE SPECIFICITY FOR NEUROTENSIN CLEAVAGE SITE.
分子名称:Neurolysin, ZINC ION
著者Rodgers, D.W., Lim, E.J.
登録日2006-12-01
公開日2007-01-23
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Swapping the substrate specificities of the neuropeptidases neurolysin and thimet oligopeptidase.
J.Biol.Chem., 282, 2007
3CPM
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PLANT PEPTIDE DEFORMYLASE PDF1B CRYSTAL STRUCTURE
分子名称:Peptide deformylase, chloroplast, SULFATE ION, ...
著者Rodgers, D.W., Houtz, R.L., Dirk, L.M.A., Schmidt, J.J., Cai, Y.
登録日2008-03-31
公開日2008-07-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture
Biochem.J., 413, 2008
3P7L
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RAT INSULIN DEGRADING ENZYME (INSULYSIN)
分子名称:Insulin-degrading enzyme, ZINC ION
著者Rodgers, D.W., Noinaj, N.
登録日2010-10-12
公開日2011-07-20
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.0776 Å)
主引用文献Identification of the allosteric regulatory site of insulysin.
Plos One, 6, 2011
3P7O
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RAT INSULIN DEGRADING ENZYME (INSULYSIN) E111F MUTANT WITH TWO BOUND PEPTIDES
分子名称:Insulin-degrading enzyme, active site bound peptide, distal site bound peptide
著者Rodgers, D.W., Noinaj, N.
登録日2010-10-12
公開日2011-07-27
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.1423 Å)
主引用文献Identification of the allosteric regulatory site of insulysin.
Plos One, 6, 2011
3TUV
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CRYSTAL STRUCTURE OF INSULYSIN WITH BOUND ATP
分子名称:Insulin-degrading enzyme, Peptide, ADENOSINE-5'-TRIPHOSPHATE
著者Rodgers, D.W., Noinaj, N.
登録日2011-09-19
公開日2011-10-26
最終更新日2012-01-11
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Anion Activation Site of Insulin-degrading Enzyme.
J.Biol.Chem., 287, 2012
4FXY
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CRYSTAL STRUCTURE OF RAT NEUROLYSIN WITH BOUND PYRAZOLIDIN INHIBITOR
分子名称:Neurolysin, mitochondrial, 1-{(2S)-1-[(3R)-3-(2-chlorophenyl)-2-(2-fluorophenyl)pyrazolidin-1-yl]-1-oxopropan-2-yl}-3-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-2-yl]urea, ...
著者Rodgers, D.W., Hines, C.S.
登録日2012-07-03
公開日2013-11-13
最終更新日2015-01-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Allosteric inhibition of the neuropeptidase neurolysin.
J.Biol.Chem., 289, 2014
4P08
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ENGINEERED THERMOSTABLE DIMERIC COCAINE ESTERASE
分子名称:Cocaine esterase
著者Rodgers, D.W., Chow, K.-M., Fang, L., Zhan, C.-G.
登録日2014-02-20
公開日2014-07-16
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (2.341 Å)
主引用文献Rational design, preparation, and characterization of a therapeutic enzyme mutant with improved stability and function for cocaine detoxification.
Acs Chem.Biol., 9, 2014
1S4B
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CRYSTAL STRUCTURE OF HUMAN THIMET OLIGOPEPTIDASE.
分子名称:Thimet oligopeptidase, ZINC ION
著者Ray, K., Hines, C.S., Coll-Rodriguez, J., Rodgers, D.W.
登録日2004-01-15
公開日2004-07-20
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human thimet oligopeptidase provides insight into substrate recognition, regulation, and localization
J.Biol.Chem., 279, 2004
1I1I
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NEUROLYSIN (ENDOPEPTIDASE 24.16) CRYSTAL STRUCTURE
分子名称:NEUROLYSIN, ZINC ION
著者Brown, C.K., Madauss, K., Lian, W., Tolbert, W.D., Beck, M.R., Rodgers, D.W.
登録日2001-02-01
公開日2001-02-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of neurolysin reveals a deep channel that limits substrate access.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KQB
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STRUCTURE OF NITROREDUCTASE FROM E. CLOACAE COMPLEX WITH INHIBITOR BENZOATE
分子名称:OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE, FLAVIN MONONUCLEOTIDE, BENZOIC ACID
著者Haynes, C.A., Koder, R.L., Miller, A.F., Rodgers, D.W.
登録日2002-01-04
公開日2002-02-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of nitroreductase in three states: effects of inhibitor binding and reduction.
J.Biol.Chem., 277, 2002
1KQC
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STRUCTURE OF NITROREDUCTASE FROM E. CLOACAE COMPLEX WITH INHIBITOR ACETATE
分子名称:OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE, ACETATE ION, FLAVIN MONONUCLEOTIDE
著者Haynes, C.A., Koder, R.L., Miller, A.F., Rodgers, D.W.
登録日2002-01-04
公開日2002-02-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of nitroreductase in three states: effects of inhibitor binding and reduction.
J.Biol.Chem., 277, 2002
1KQD
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STRUCTURE OF NITROREDUCTASE FROM E. CLOACAE BOUND WITH 2E-REDUCED FLAVIN MONONUCLEOTIDE (FMN)
分子名称:OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE, FLAVIN MONONUCLEOTIDE
著者Haynes, C.A., Koder, R.L., Miller, A.F., Rodgers, D.W.
登録日2002-01-04
公開日2002-02-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of nitroreductase in three states: effects of inhibitor binding and reduction.
J.Biol.Chem., 277, 2002
1Q6X
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CRYSTAL STRUCTURE OF RAT CHOLINE ACETYLTRANSFERASE
分子名称:choline O-acetyltransferase, SODIUM ION
著者Cai, Y., Rodgers, D.W.
登録日2003-08-14
公開日2004-06-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Choline acetyltransferase structure reveals distribution of mutations that cause motor disorders.
Embo J., 23, 2004
1ZA5
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Q69H-FESOD
分子名称:Superoxide dismutase [Fe], FE (III) ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
著者Yikilmaz, E., Rodgers, D.W., Miller, A.F.
登録日2005-04-05
公開日2006-03-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crucial Importance of Chemistry in the Structure-Function Link: Manipulating Hydrogen Bonding in Iron-Containing Superoxide Dismutase.
Biochemistry, 45, 2006
2BKB
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Q69E-FESOD
分子名称:SUPEROXIDE DISMUTASE [FE], FE (II) ION
著者Yikilmaz, E., Rodgers, D.W., Miller, A.-F.
登録日2005-02-14
公開日2007-01-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Crucial Importance of Chemistry in the Structure-Function Link: Manipulating Hydrogen Bonding in Iron-Containing Superoxide Dismutase.
Biochemistry, 45, 2006
2OR1
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RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION
分子名称:DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3'), 434 REPRESSOR
著者Aggarwal, A.K., Rodgers, D.W., Drottar, M., Ptashne, M., Harrison, S.C.
登録日1989-09-05
公開日1989-09-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Recognition of a DNA operator by the repressor of phage 434: a view at high resolution.
Science, 242, 1988
5J8D
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STRUCTURE OF NITROREDUCTASE FROM E. CLOACAE COMPLEXED WITH NICOTINIC ACID ADENINE DINUCLEOTIDE
分子名称:Oxygen-insensitive NAD(P)H nitroreductase, FLAVIN MONONUCLEOTIDE, NICOTINIC ACID ADENINE DINUCLEOTIDE
著者Haynes, C.A., Koder, R.L., Miller, A.F., Rodgers, D.W.
登録日2016-04-07
公開日2017-05-17
最終更新日2017-12-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism-Informed Refinement Reveals Altered Substrate-Binding Mode for Catalytically Competent Nitroreductase.
Structure, 25, 2017
5J8G
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STRUCTURE OF NITROREDUCTASE FROM E. CLOACAE COMPLEXED WITH PARA-NITROBENZOIC ACID
分子名称:Oxygen-insensitive NAD(P)H nitroreductase, FLAVIN MONONUCLEOTIDE, 4-NITROBENZOIC ACID
著者Haynes, C.A., Koder, R.L., Miller, A.-F., Rodgers, D.W.
登録日2016-04-07
公開日2017-05-17
最終更新日2017-12-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism-Informed Refinement Reveals Altered Substrate-Binding Mode for Catalytically Competent Nitroreductase.
Structure, 25, 2017
3CUE
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CRYSTAL STRUCTURE OF A TRAPP SUBASSEMBLY ACTIVATING THE RAB YPT1P
分子名称:Transport protein particle 23 kDa subunit, Transport protein particle 31 kDa subunit, Transport protein particle 18 kDa subunit, ...
著者Cai, Y., Reinisch, K.M.
登録日2008-04-16
公開日2008-07-08
最終更新日2012-03-21
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes.
Cell(Cambridge,Mass.), 133, 2008
3CRO
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THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
分子名称:DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 CRO)
著者Mondragon, A., Harrison, S.C.
登録日1990-07-06
公開日1991-10-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The phage 434 Cro/OR1 complex at 2.5 A resolution.
J.Mol.Biol., 219, 1991