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6TJP
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BU of 6tjp by Molmil
Crystal structure of T7 bacteriophage portal protein, 13mer, closed valve - P212121
Descriptor: Portal protein
Authors:Fabrega-Ferrer, M, Cuervo, A, Fernandez, F.J, Machon, C, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
Deposit date:2019-11-26
Release date:2020-12-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.74 Å)
Cite:Using a partial atomic model from medium-resolution cryo-EM to solve a large crystal structure.
Acta Crystallogr D Struct Biol, 77, 2021
6TM0
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BU of 6tm0 by Molmil
N-Domain P40/P90 Mycoplasma pneumoniae complexed with 6'SL
Descriptor: Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I, Perez-Luque, R, Martin, J.
Deposit date:2019-12-03
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
4IQX
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BU of 4iqx by Molmil
Mutant P44S P169S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase
Descriptor: 3D polymerase, RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3'), RNA (5'-R(*GP*GP*CP*CP*C)-3')
Authors:Ferrer-Orta, C, Verdaguer, N, Agudo, R, Perez-Luque, R.
Deposit date:2013-01-14
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A multi-step process of viral adaptation to a mutagenic nucleoside analogue by modulation of transition types leads to extinction-escape.
Plos Pathog., 6, 2010
2EC0
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BU of 2ec0 by Molmil
RNA-dependent RNA polymerase of foot-and-mouth disease virus in complex with a template-primer RNA and ATP
Descriptor: 5'-R(*GP*GP*GP*CP*CP*CP*A)-3', 5'-R(P*AP*UP*GP*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2007-02-09
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E9T
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BU of 2e9t by Molmil
Foot-and-mouth disease virus RNA-polymerase RNA dependent in complex with a template-primer RNA and 5F-UTP
Descriptor: 5'-R(*GP*GP*GP*CP*CP*CP*(5FU))-3', 5'-R(P*UP*AP*GP*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2007-01-26
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E9R
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BU of 2e9r by Molmil
Foot-and-mouth disease virus RNA-dependent RNA polymerase in complex with a template-primer RNA and with ribavirin
Descriptor: 5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3', 5'-R(*CP*CP*C*GP*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2007-01-26
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007
5C1V
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BU of 5c1v by Molmil
CRYSTAL STRUCTURE ANALYSIS OF CATALYTIC SUBUNIT OF HUMAN CALCINEURIN
Descriptor: FE (III) ION, PHOSPHATE ION, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, ...
Authors:Guasch, A, Fita, I, Perez-Luque, R, Aparicio, D, Aranguren-Ibanez, A, Perez-Riba, M.
Deposit date:2015-06-15
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Calcineurin Undergoes a Conformational Switch Evoked via Peptidyl-Prolyl Isomerization.
Plos One, 10, 2015
1OMH
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BU of 1omh by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: DNA OLIGONUCLEOTIDE, SULFATE ION, trwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-02-25
Release date:2003-11-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
1OSB
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BU of 1osb by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: Dna oligonucleotide, SULFATE ION, TrwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-03-19
Release date:2003-11-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
1WNE
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BU of 1wne by Molmil
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with a template-primer RNA
Descriptor: 5'-R(*CP*AP*UP*GP*GP*GP*CP*C)-3', 5'-R(*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2004-07-31
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Foot-and-Mouth Disease Virus RNA-dependent RNA Polymerase and Its Complex with a Template-Primer RNA
J.Biol.Chem., 279, 2004
1YE9
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BU of 1ye9 by Molmil
Crystal structure of proteolytically truncated catalase HPII from E. coli
Descriptor: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, catalase HPII
Authors:Loewen, P.C, Chelikani, P, Carpena, X, Fita, I, Perez-Luque, R, Donald, L.J, Switala, J, Duckworth, H.W.
Deposit date:2004-12-28
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of a Large Subunit Catalase Truncated by Proteolytic Cleavage(,)
Biochemistry, 44, 2005
2D7S
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BU of 2d7s by Molmil
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with VPg protein
Descriptor: RNA-dependent RNA polymerase, VPg1 protein
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2005-11-29
Release date:2006-03-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of a protein primer-polymerase complex in the initiation of genome replication
Embo J., 25, 2006
2CDM
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BU of 2cdm by Molmil
The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site
Descriptor: 5'-D(*GP*CP*GP*CP*AP*CP*CP*GP*AP*AP *AP*GP*GP*TP*GP*CP*GP*TP*AP*TP*TP*GP*TP*CP*TP*AP*T)-3', SULFATE ION, TRWC
Authors:Boer, R, Russi, S, Guasch, A, Lucas, M, Blanco, A.G, Perez-Luque, R, Coll, M, de la Cruz, F.
Deposit date:2006-01-25
Release date:2006-07-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unveiling the Molecular Mechanism of a Conjugative Relaxase: The Structure of Trwc Complexed with a 27-mer DNA Comprising the Recognition Hairpin and the Cleavage Site.
J.Mol.Biol., 358, 2006
2F8E
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BU of 2f8e by Molmil
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, RNA-dependent RNA polymerase, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2005-12-02
Release date:2006-03-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of a protein primer-polymerase complex in the initiation of genome replication
Embo J., 25, 2006
8B4C
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BU of 8b4c by Molmil
ToxR bacterial transcriptional regulator bound to 20 bp toxT promoter DNA
Descriptor: Cholera toxin transcriptional activator, DNA (20-MER)
Authors:Canals, A, Pieretti, S, Muriel, M, El Yaman, N, Fabrega-Ferrer, M, Perez-Luque, R, Krukonis, E.S, Coll, M.
Deposit date:2022-09-20
Release date:2023-08-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:ToxR activates the Vibrio cholerae virulence genes by tethering DNA to the membrane through versatile binding to multiple sites.
Proc.Natl.Acad.Sci.USA, 120, 2023
8B4E
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BU of 8b4e by Molmil
ToxR bacterial transcriptional regulator bound to 25 bp toxT promoter DNA
Descriptor: Cholera toxin transcriptional activator, DNA (25-MER)
Authors:Canals, A, Pieretti, S, Muriel, M, El Yaman, N, Fabrega-Ferrer, M, Perez-Luque, R, Krukonis, E.S, Coll, M.
Deposit date:2022-09-20
Release date:2023-08-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:ToxR activates the Vibrio cholerae virulence genes by tethering DNA to the membrane through versatile binding to multiple sites.
Proc.Natl.Acad.Sci.USA, 120, 2023
8B4D
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BU of 8b4d by Molmil
ToxR bacterial transcriptional regulator bound to 40 bp toxT promoter DNA
Descriptor: Cholera toxin transcriptional activator, DNA (40-MER)
Authors:Canals, A, Pieretti, S, Muriel, M, El Yaman, N, Fabrega-Ferrer, M, Perez-Luque, R, Krukonis, E.S, Coll, M.
Deposit date:2022-09-20
Release date:2023-08-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:ToxR activates the Vibrio cholerae virulence genes by tethering DNA to the membrane through versatile binding to multiple sites.
Proc.Natl.Acad.Sci.USA, 120, 2023
8B4B
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BU of 8b4b by Molmil
ToxR bacterial transcriptional regulator bound to 19 bp ompU promoter DNA
Descriptor: AMMONIUM ION, CADMIUM ION, Cholera toxin transcriptional activator, ...
Authors:Canals, A, Pieretti, S, Muriel, M, El Yaman, N, Fabrega-Ferrer, M, Perez-Luque, R, Krukonis, E.S, Coll, M.
Deposit date:2022-09-20
Release date:2023-08-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:ToxR activates the Vibrio cholerae virulence genes by tethering DNA to the membrane through versatile binding to multiple sites.
Proc.Natl.Acad.Sci.USA, 120, 2023
1QWM
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BU of 1qwm by Molmil
Structure of Helicobacter pylori catalase with formic acid bound
Descriptor: AZIDE ION, FORMIC ACID, KatA catalase, ...
Authors:Loewen, P.C, Carpena, X, Perez-Luque, R, Rovira, C, Haas, R, Odenbreit, S, Nicholls, P, Fita, I.
Deposit date:2003-09-02
Release date:2004-03-30
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Helicobacter pylori Catalase, with and without Formic Acid Bound, at 1.6 A Resolution
Biochemistry, 43, 2004
1QWL
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BU of 1qwl by Molmil
Structure of Helicobacter pylori catalase
Descriptor: AZIDE ION, KatA catalase, OXYGEN MOLECULE, ...
Authors:Loewen, P.C, Carpena, X, Perez-Luque, R, Rovira, C, Haas, R, Obenbreit, S, Nicholls, P, Fita, I.
Deposit date:2003-09-02
Release date:2004-03-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Helicobacter pylori Catalase, with and without Formic Acid Bound, at 1.6 A Resolution
Biochemistry, 43, 2004
1S6M
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BU of 1s6m by Molmil
Conjugative Relaxase Trwc In Complex With Orit DNA. Metal-Bound Structure
Descriptor: DNA (25-MER), NICKEL (II) ION, TrwC
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2004-01-26
Release date:2005-06-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Unveiling the molecular mechanism of a conjugative relaxase: The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site.
J.Mol.Biol., 358, 2006
2BL4
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BU of 2bl4 by Molmil
Lactaldehyde:1,2-propanediol oxidoreductase of Escherichia coli
Descriptor: CHLORIDE ION, FE (II) ION, LACTALDEHYDE REDUCTASE, ...
Authors:Montella, C, Bellsolell, L, Perez-Luque, R, Badia, J, Baldoma, L, Coll, M, Aguilar, J.
Deposit date:2005-03-01
Release date:2005-07-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure of an Iron-Dependent Group III Dehydrogenase that Interconverts L-Lactaldehyde and L-1,2-Propanediol in Escherichia Coli.
J.Bacteriol., 187, 2005
5OXX
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BU of 5oxx by Molmil
Crystal structure of NeqN/NeqC complex from Nanoarcheaum equitans at 1.7A
Descriptor: NEQ068, NEQ528
Authors:Aparicio, D, Perez-Luque, R, Ribo, M, Fita, I.
Deposit date:2017-09-07
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural Insights into Subunits Assembly and the Oxyester Splicing Mechanism of Neq pol Split Intein.
Cell Chem Biol, 25, 2018
5OXW
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BU of 5oxw by Molmil
Structure of NeqN from Nanoarchaeum equitans
Descriptor: ALA-SER-GLY-SER-PHE-LYS-VAL-ILE-TYR-GLY-ASP, NEQ068
Authors:Aparicio, D, Perez-Luque, R, Ribo, M, Fita, I.
Deposit date:2017-09-07
Release date:2018-10-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Insights into Subunits Assembly and the Oxyester Splicing Mechanism of Neq pol Split Intein.
Cell Chem Biol, 25, 2018
5OXZ
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BU of 5oxz by Molmil
Crystal Structure of NeqN/NeqC complex from Nanoarcheaum equitans at 1.2A
Descriptor: NEQ068, NEQ528
Authors:Aparicio, D, Perez-Luque, R, Ribo, M, Fita, I.
Deposit date:2017-09-07
Release date:2018-10-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Insights into Subunits Assembly and the Oxyester Splicing Mechanism of Neq pol Split Intein.
Cell Chem Biol, 25, 2018

 

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