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4XVB
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BU of 4xvb by Molmil
Recombinant thaumatin in the presence of 1.5M PST at 293K
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Masuda, T, Okubo, K, Mikami, B.
Deposit date:2015-01-27
Release date:2016-02-03
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of the recombinant thaumatin in the presence of PST at room temperature
To Be Published
4TOQ
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BU of 4toq by Molmil
Crystal structure of class III chitinase from pomegranate provides the insight into its metal storage capacity
Descriptor: CHLORIDE ION, Class III chitinase, MAGNESIUM ION
Authors:Masuda, T, Zhao, G, Mikami, B.
Deposit date:2014-06-06
Release date:2014-09-10
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of class III chitinase from pomegranate provides the insight into its metal storage capacity.
Biosci.Biotechnol.Biochem., 79, 2015
5KXU
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BU of 5kxu by Molmil
Structure Proteinase K determined by SACLA
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Masuda, T, Suzuki, M, Inoue, S, Numata, K, Sugahara, M.
Deposit date:2016-07-20
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Atomic resolution structure of serine protease proteinase K at ambient temperature.
Sci Rep, 7, 2017
5KXV
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BU of 5kxv by Molmil
Structure Proteinase K at 0.98 Angstroms
Descriptor: CALCIUM ION, GLYCEROL, NITRATE ION, ...
Authors:Masuda, T, Suzuki, M, Inoue, S, Numata, K, Sugahara, M.
Deposit date:2016-07-20
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Atomic resolution structure of serine protease proteinase K at ambient temperature.
Sci Rep, 7, 2017
5X9M
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BU of 5x9m by Molmil
Structure of hyper-sweet thaumatin (D21N)
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
Authors:Masuda, T, Okubo, K, Sugahara, M, Suzuki, M, Mikami, B.
Deposit date:2017-03-08
Release date:2018-03-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Subatomic structure of hyper-sweet thaumatin D21N mutant reveals the importance of flexible conformations for enhanced sweetness.
Biochimie, 157, 2019
5X9L
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BU of 5x9l by Molmil
Recombinant thaumatin I at 0.9 Angstrom
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
Authors:Masuda, T, Okubo, K, Sugahara, M, Suzuki, M, Mikami, B.
Deposit date:2017-03-08
Release date:2018-03-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Subatomic structure of hyper-sweet thaumatin D21N mutant reveals the importance of flexible conformations for enhanced sweetness.
Biochimie, 157, 2019
2RPD
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BU of 2rpd by Molmil
Mhr1p-bound ssDNA
Descriptor: DNA (5'-D(*DTP*DAP*DCP*DG)-3')
Authors:Masuda, T, Ito, Y, Shibata, T, Mikawa, T.
Deposit date:2008-05-15
Release date:2009-05-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A non-canonical DNA structure enables homologous recombination in various genetic systems
J.Biol.Chem., 284, 2009
2RPF
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BU of 2rpf by Molmil
RecO-bound ssDNA
Descriptor: DNA (5'-D(*DTP*DAP*DCP*DG)-3')
Authors:Masuda, T, Ito, Y, Shibata, T, Mikawa, T.
Deposit date:2008-05-15
Release date:2009-05-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A non-canonical DNA structure enables homologous recombination in various genetic systems
J.Biol.Chem., 284, 2009
2RPH
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BU of 2rph by Molmil
RecT-bound ssDNA
Descriptor: DNA (5'-D(*DTP*DAP*DCP*DG)-3')
Authors:Masuda, T, Ito, Y, Shibata, T, Mikawa, T.
Deposit date:2008-05-15
Release date:2009-05-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A non-canonical DNA structure enables homologous recombination in various genetic systems
J.Biol.Chem., 284, 2009
2RPE
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BU of 2rpe by Molmil
hsRad51-bound ssDNA
Descriptor: DNA (5'-D(*DTP*DAP*DCP*DG)-3')
Authors:Masuda, T, Ito, Y, Shibata, T, Mikawa, T.
Deposit date:2008-05-15
Release date:2009-05-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A non-canonical DNA structure enables homologous recombination in various genetic systems
J.Biol.Chem., 284, 2009
8JZ8
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BU of 8jz8 by Molmil
Subatomic structure of orthorhombic thaumatin at 0.89 Angstroms
Descriptor: DI(HYDROXYETHYL)ETHER, Thaumatin I
Authors:Masuda, T, Suzuki, M, Yamasaki, M, Mikami, B.
Deposit date:2023-07-04
Release date:2024-05-15
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Subatomic structure of orthorhombic thaumatin at 0.89 angstrom reveals that highly flexible conformations are crucial for thaumatin sweetness.
Biochem.Biophys.Res.Commun., 703, 2024
5GQP
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BU of 5gqp by Molmil
Thaumatin Structure at pH 8.0, orthorhombic type1
Descriptor: Thaumatin I
Authors:Masuda, T, Sano, A, Murata, K, Okubo, K, Suzuki, M, Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.296 Å)
Cite:Thaumatin Structure at pH 8.0, orthorhombic type1
To Be Published
6L8S
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BU of 6l8s by Molmil
High resolution crystal structure of crustacean hemocyanin.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Masuda, T, Mikami, B, Baba, S.
Deposit date:2019-11-07
Release date:2020-05-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The high-resolution crystal structure of lobster hemocyanin shows its enzymatic capability as a phenoloxidase.
Arch.Biochem.Biophys., 688, 2020
5SW0
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BU of 5sw0 by Molmil
Thaumatin Structure at pH 4.0
Descriptor: PHOSPHATE ION, Thaumatin I
Authors:Masuda, T, Okubo, K, Suzuki, M, Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.269 Å)
Cite:Thaumatin Structure at pH 4.0
To Be Published
5SW1
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BU of 5sw1 by Molmil
Thaumatin Structure at pH 6.0
Descriptor: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Thaumatin I
Authors:Masuda, T, Sano, A, Murata, K, Okubo, K, Suzuki, M, Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Thaumatin Structure at pH 6.0
To Be Published
5SW2
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BU of 5sw2 by Molmil
Thaumatin Structure at pH 6.0, orthorhombic type1
Descriptor: GLYCEROL, Thaumatin I
Authors:Masuda, T, Sano, A, Murata, K, Okubo, K, Suzuki, M, Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Thaumatin Structure at pH 6.0, orthorhombic type1
To Be Published
5YYP
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BU of 5yyp by Molmil
Structure K137A thaumatin
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Preprothaumatin I
Authors:Masuda, T, Kigo, S, Mitsumoto, M, Ohta, K, Suzuki, M, Mikami, B, Kitabatake, N, Tani, F.
Deposit date:2017-12-10
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Positive Charges on the Surface of Thaumatin Are Crucial for the Multi-Point Interaction with the Sweet Receptor.
Front Mol Biosci, 5, 2018
5YYQ
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BU of 5yyq by Molmil
Structure K78A thaumatin
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Preprothaumatin I
Authors:Masuda, T, Kigo, S, Mitsumoto, M, Ohta, K, Suzuki, M, Mikami, B, Kitabatake, N, Tani, F.
Deposit date:2017-12-10
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Positive Charges on the Surface of Thaumatin Are Crucial for the Multi-Point Interaction with the Sweet Receptor.
Front Mol Biosci, 5, 2018
5YYR
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BU of 5yyr by Molmil
Structure K106A thaumatin
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Preprothaumatin I
Authors:Masuda, T, Kigo, S, Ohta, K, Mitsumoto, M, Mikami, B, Suzuki, M, Kitabatake, N, Tani, F.
Deposit date:2017-12-10
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Positive Charges on the Surface of Thaumatin Are Crucial for the Multi-Point Interaction with the Sweet Receptor.
Front Mol Biosci, 5, 2018
6A4U
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BU of 6a4u by Molmil
The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ferritin, ...
Authors:Masuda, T, Mikami, B, Zang, J, Zhao, G.
Deposit date:2018-06-21
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin
Protein Sci., 27, 2018
3VJQ
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BU of 3vjq by Molmil
Recombinant thaumatin at pH 8.0 with hydrogen atoms
Descriptor: GLYCEROL, Thaumatin I
Authors:Masuda, T, Mikami, B, Tani, F.
Deposit date:2011-10-27
Release date:2012-05-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic structure of the sweet-tasting protein thaumatin I at pH 8.0 reveals the large disulfide-rich region in domain II to be sensitive to a pH change
Biochem.Biophys.Res.Commun., 419, 2012
3VHG
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BU of 3vhg by Molmil
Recombinant thaumatin I at PH 8.0
Descriptor: GLYCEROL, Thaumatin I
Authors:Masuda, T, Mikami, B, Kitabatake, N, Tani, F.
Deposit date:2011-08-24
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Recombinat thaumatin I at pH 8.0
To be Published
3VNX
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BU of 3vnx by Molmil
Crystal structure of ferritin from multicellular green algae, Ulva pertusa.
Descriptor: CALCIUM ION, ferritin
Authors:Masuda, T, Morimoto, S.I, Mikami, B, Toyohara, H.
Deposit date:2012-01-18
Release date:2012-03-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The extension peptide of plant ferritin from sea lettuce contributes to shell stability and surface hydrophobicity.
Protein Sci., 21, 2012
3VHF
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BU of 3vhf by Molmil
plant thaumatin I at pH 8.0
Descriptor: GLYCEROL, Thaumatin I
Authors:Masuda, T, Mikami, B, Kitabatake, N, Tani, F.
Deposit date:2011-08-24
Release date:2012-05-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Atomic structure of the sweet-tasting protein thaumatin I at pH 8.0 reveals the large disulfide-rich region in domain II to be sensitive to a pH change
Biochem.Biophys.Res.Commun., 419, 2012
3A68
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BU of 3a68 by Molmil
Crystal structure of plant ferritin reveals a novel metal binding site that functions as a transit site for metal transfer in ferritin
Descriptor: ACETIC ACID, CALCIUM ION, Ferritin-4, ...
Authors:Masuda, T, Goto, F, Yoshihara, T, Mikami, B.
Deposit date:2009-08-26
Release date:2009-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of plant ferritin reveals a novel metal binding site that functions as a transit site for metal transfer in ferritin
J.Biol.Chem., 285, 2010

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