Author results

5XDS
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CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS HISB BOUND WITH AN INHIBITOR
Descriptor:Imidazoleglycerol-phosphate dehydratase, MANGANESE (II) ION, CHLORIDE ION, ...
Authors:Kumar, D., Jha, B., Ahangar, M.S., Kumar, B.B.
Deposit date:2017-03-29
Release date:2018-04-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Mycobacterium tuberculosis HisB bound with an inhibitor
To Be Published
2K1F
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SUMO-3 FROM DROSOPHILA MELANOGASTER (DSMT3)
Descriptor:CG4494-PA
Authors:Kumar, D., Misra, J.R., Misra, A.K., Chugh, J., Sharma, S., Hosur, R.V.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR-derived solution structure of SUMO from Drosophila melanogaster (dSmt3)
Proteins, 2009
2LD9
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BACKBONE STRUCTURE OF UBIQUITIN DETERMINED USING BACKBONE AMIDE NOES AND BACKBONE N-H AND N-C RDCS
Descriptor:Ubiquitin
Authors:Kumar, D., Hosur, R.
Deposit date:2011-05-18
Release date:2011-06-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:AUTOBA: Automation of Backbone Assignment from HN(C)N Suite of Experiments
To be Published
2LJ3
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PFBD: HIGH-THROUGHPUT STRATEGY OF BACKBONE FOLD DETERMINATION FOR SMALL WELL-FOLDED PROTEINS IN LESS THAN A DAY
Descriptor:Spectrin alpha chain, brain
Authors:Kumar, D., Hosur, R.
Deposit date:2011-09-04
Release date:2011-12-07
Method:SOLUTION NMR
Cite:PFBD: High-throughput Strategy of Backbone fold Determination for small well-folded proteins in less than a day
To be Published
2MOT
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BACKBONE STRUCTURE OF ACTIN DEPOLYMERIZING FACTOR (ADF) OF TOXOPLASMA GONDII BASED ON PROT3DNMR APPROACH
Descriptor:Actin depolymerizing factor ADF
Authors:Kumar, D., Raikwal, N., Raval, I., Jaiswal, N., Shukla, V., Arora, A.
Deposit date:2014-05-05
Release date:2015-05-27
Method:SOLUTION NMR
Cite:Prot3DNMR: A Simple and Swift Strategy for Backbone Structure Determination of Proteins by NMR
To be Published
2MW5
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BACKBONE FOLD OF HUMAN SMALL UBIQUITIN LIKE MODIFIER PROTEIN-1 (SUMO-1) BASED ON PROT3D-NMR APPROACH.
Descriptor:Small ubiquitin-related modifier 1
Authors:Kumar, D., Jaiswal, N., Raikwal, N., Shukla, V., Arora, A.
Deposit date:2014-10-28
Release date:2014-12-03
Last modified:2014-12-10
Method:SOLUTION NMR
Cite:Prot3DNMR: A simple and swift NMR strategy for Three-Dimentional structutral determination of proteins.
To be Published
5C82
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CRYSTAL STRUCTURE OF NOURSEOTHRICIN ACETYLTRANSFERASE
Descriptor:Nourseothricin acetyltransferase, D(-)-TARTARIC ACID
Authors:Kumar, D., Ghosh, A., Taneja, B., Chakraborty, K.
Deposit date:2015-06-25
Release date:2016-06-29
Last modified:2018-07-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Nourseothricin acetyltransferase
To Be Published
5ZQN
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CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS HISB IN COMPLEX WITH A LIGAND
Descriptor:Imidazoleglycerol-phosphate dehydratase, MANGANESE (II) ION, CHLORIDE ION, ...
Authors:Kumar, D., Pal, R.K., Biswal, B.K.
Deposit date:2018-04-19
Release date:2018-05-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Mycobacterium tuberculosis HisB in complex with a ligand
To Be Published
4LS9
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STRUCTURE OF MYCOBACTERIAL NRNA HOMOLOG REVEALS MULTIFUNCTIONAL NUCLEASE ACTIVITIES
Descriptor:DHH family protein, MANGANESE (II) ION, GLYCEROL
Authors:Kumar, D., Srivastav, R., Grover, A., Manjasetty, B.A., Sharma, R., Taneja, B.
Deposit date:2013-07-22
Release date:2014-07-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Unique subunit packing in mycobacterial nanoRNase leads to alternate substrate recognitions in DHH phosphodiesterases
Nucleic Acids Res., 42, 2014
4LQ6
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CRYSTAL STRUCTURE OF RV3717 REVEALS A NOVEL AMIDASE FROM M. TUBERCULOSIS
Descriptor:N-acetymuramyl-L-alanine amidase-related protein, ZINC ION, SULFATE ION, ...
Authors:Kumar, A., Kumar, S., Kumar, D., Mishra, A., Dewangan, R.P., Shrivastava, P., Ramachandran, S., Taneja, B.
Deposit date:2013-07-17
Release date:2013-12-04
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The structure of Rv3717 reveals a novel amidase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 69, 2013
2MV2
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SOLUTION STRUCTURE OF TWINSTAR FROM DROSOPHILA MELANOGASTOR
Descriptor:Cofilin/actin-depolymerizing factor homolog
Authors:Shukla, V.K., Maheshwari, D., Kumar, D., Arora, A.
Deposit date:2014-09-20
Release date:2015-09-23
Last modified:2016-12-28
Method:SOLUTION NMR
Cite:Solution structure and dynamics of Twinstar from Drosophila melanogastor
To be Published
5YNR
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SOLUTION STRUCTURE OF GLIA MATURATION FACTOR FROM CAENORHABDITIS ELEGANS
Descriptor:Glia Mutation factor
Authors:Maheshwari, D., Shukla, V.K., Kumar, D., Arora, A.
Deposit date:2017-10-25
Release date:2018-10-24
Method:SOLUTION NMR
Cite:Solution structure and dynamics of glia maturation factor from Caenorhabditis elegans
Biochim Biophys Acta Proteins Proteom, 1866, 2018
1Y7H
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STRUCTURAL AND BIOCHEMICAL STUDIES IDENTIFY TOBACCO SABP2 AS A METHYLSALICYLATE ESTERASE AND FURTHER IMPLICATE IT IN PLANT INNATE IMMUNITY, NORTHEAST STRUCTURAL GENOMICS TARGET AR2241
Descriptor:salicylic acid-binding protein 2, THIOCYANATE ION
Authors:Forouhar, F., Yang, Y., Kumar, D., Chen, Y., Fridman, E., Park, S.W., Chiang, Y., Acton, T.B., Montelione, G.T., Pichersky, E., Klessig, D.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-12-08
Release date:2004-12-28
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Y7I
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STRUCTURAL AND BIOCHEMICAL STUDIES IDENTIFY TOBACCO SABP2 AS A METHYLSALICYLATE ESTERASE AND FURTHER IMPLICATE IT IN PLANT INNATE IMMUNITY, NORTHEAST STRUCTURAL GENOMICS TARGET AR2241
Descriptor:salicylic acid-binding protein 2, 2-HYDROXYBENZOIC ACID
Authors:Forouhar, F., Yang, Y., Kumar, D., Chen, Y., Fridman, E., Park, S.W., Chiang, Y., Acton, T.B., Montelione, G.T., Pichersky, E., Klessig, D.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-12-08
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.USA, 102, 2005
2LXX
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SOLUTION STRUCTURE OF COFILIN LIKE UNC-60B PROTEIN FROM CAENORHABDITIS ELEGANS
Descriptor:Actin-depolymerizing factor 2, isoform c
Authors:Shukla, V., Yadav, R., Kabra, A., Jain, A., Kumar, D., Ono, S., Arora, A.
Deposit date:2012-09-04
Release date:2013-10-09
Last modified:2016-12-21
Method:SOLUTION NMR
Cite:Solution structure and dynamics of UNC-60B from Caenorhabditis elegans
To be Published
2MAZ
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BACKBONE 1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR BOVINE APO CALBINDIN
Descriptor:Protein S100-G
Authors:Raikwal, N., Kumar, D.
Deposit date:2013-07-22
Release date:2013-08-07
Method:SOLUTION NMR
Cite:Prot3DNMR: A Simple and Swift NMR Strategy for Three-Dimensional Structure Determination of Proteins
To be Published
2MP4
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SOLUTION STRUCTURE OF ADF LIKE UNC-60A PROTEIN OF CAENORHABDITIS ELEGANS
Descriptor:Actin-depolymerizing factor 1, isoforms a/b
Authors:Shukla, V., Yadav, R., Kabra, A., Kumar, D., Ono, S., Arora, A.
Deposit date:2014-05-11
Release date:2014-06-11
Method:SOLUTION NMR
Cite:NMR Structure and Backbone dynamics of ADF like UNC-60A protein from Caenorhabditis elegans: its divergence from conventional ADF/cofilin
To be Published
5ZON
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HISTIDINOL PHOSPHATE PHOSPHATASE FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor:Histidinol-phosphatase, ZINC ION, PHOSPHATE ION, ...
Authors:Jha, B., Kumar, D., Biswal, B.K.
Deposit date:2018-04-13
Release date:2018-05-23
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Identification and structural characterization of a histidinol phosphate phosphatase from Mycobacterium tuberculosis
J. Biol. Chem., 293, 2018
5ZUR
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ACHROMOBACTER DH1F BACTERIOFERRITIN
Descriptor:Bacterioferritin, PROTOPORPHYRIN IX CONTAINING FE, FE (II) ION, ...
Authors:Dwivedy, A., Jha, B., Singh, K.H., Ahmed, M., Ashraf, A., Kumar, D., Biswal, B.K.
Deposit date:2018-05-08
Release date:2018-09-05
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Serendipitous crystallization and structure determination of bacterioferritin from Achromobacter.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZVJ
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CRYSTAL STRUCTURE OF HTRA1 FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor:Serine protease, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
Authors:Khundrakpam, H.S., Yadav, S., Kumar, D., Biswal, B.K.
Deposit date:2018-05-10
Release date:2018-09-05
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of an essential high-temperature requirement protein HtrA1 (Rv1223) from Mycobacterium tuberculosis reveals its unique features
Acta Crystallogr.,Sect.D, 74, 2018
1XKL
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CRYSTAL STRUCTURE OF SALICYLIC ACID-BINDING PROTEIN 2 (SABP2) FROM NICOTIANA TABACUM, NESG TARGET AR2241
Descriptor:salicylic acid-binding protein 2, 2-AMINO-4H-1,3-BENZOXATHIIN-4-OL
Authors:Forouhar, F., Chen, Y., Chiang, Y., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-09-29
Release date:2004-11-30
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.USA, 102, 2005
2M2C
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SOLUTION STRUCTURE OF DUPLEX DNA
Descriptor:DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*AP*GP*CP*AP*TP*GP*CP*GP*C)-3')
Authors:Ghosh, A., Kar, R.K., Chatterjee, S., Bhunia, A.
Deposit date:2012-12-18
Release date:2013-01-23
Last modified:2015-09-02
Method:SOLUTION NMR
Cite:Indolicidin targets duplex DNA: structural and mechanistic insight through a combination of spectroscopy and microscopy.
Chemmedchem, 9, 2014
3ZGJ
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S221M V223F Y359A MUTANT OF 4-HYDROXYMANDELATE SYNTHASE FROM STREPTOMYCES COELICOLOR
Descriptor:4-HYDROXYPHENYLPYRUVIC ACID DIOXYGENASE, COBALT (II) ION, (R)-MANDELIC ACID
Authors:Pratter, S., Straganz, G., Grogan, G.
Deposit date:2012-12-18
Release date:2013-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Inversion of Enantioselectivity of a Mononuclear Non-Heme Iron(II)-Dependent Hydroxylase by Tuning the Interplay of Metal Center Geometry and Protein Structure
Angew.Chem.Int.Ed.Engl., 52, 2013
5WRX
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VG13P STRUCTURE IN LPS
Descriptor:analogue peptide VG13P
Authors:Datta, A., Bhunia, A.
Deposit date:2016-12-04
Release date:2017-05-10
Method:SOLUTION NMR
Cite:Structural and Dynamic Insights into a Glycine-Mediated Short Analogue of a Designed Peptide in Lipopolysaccharide Micelles: Correlation Between Compact Structure and Anti-Endotoxin Activity.
Biochemistry, 56, 2017
5YHT
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CRYSTAL STRUCTURE OF A PHOSPHATASE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH ITS SUBSTRATE
Descriptor:Histidinol-phosphatase, ZINC ION, PHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER, ...
Authors:Biswal, B.K., Jha, B.
Deposit date:2017-09-29
Release date:2018-05-23
Last modified:2018-07-11
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Identification and structural characterization of a histidinol phosphate phosphatase fromMycobacterium tuberculosis
J. Biol. Chem., 293, 2018