Author results

1UAQ
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THE CRYSTAL STRUCTURE OF YEAST CYTOSINE DEAMINASE
Descriptor:cytosine deaminase, ZINC ION, DIHYDROPYRIMIDINE-2,4(1H,3H)-DIONE
Authors:Ko, T.-P., Lin, J.-J., Hu, C.-Y., Hsu, Y.-H., Wang, A.H.-J., Liaw, S.-H.
Deposit date:2003-03-14
Release date:2003-04-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of yeast cytosine deaminase. Insights into enzyme mechanism and evolution
J.Biol.Chem., 278, 2003
1UCS
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TYPE III ANTIFREEZE PROTEIN RD1 FROM AN ANTARCTIC EEL POUT
Descriptor:Antifreeze peptide RD1
Authors:Ko, T.-P., Robinson, H., Gao, Y.-G., Cheng, C.-H.C., DeVries, A.L., Wang, A.H.-J.
Deposit date:2003-04-21
Release date:2003-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.62 Å)
Cite:The refined crystal structure of an eel pout type III antifreeze protein RD1 at 0.62-(angstrom) resolution reveals structural microheterogeneity of protein and solvation
BIOPHYS.J., 84, 2003
3LBM
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D-SIALIC ACID ALDOLASE
Descriptor:N-acetylneuraminate lyase, SULFATE ION
Authors:Ko, T.-P., Chou, C.-Y., Wang, A.H.-J.
Deposit date:2010-01-08
Release date:2011-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Modulation of substrate specificities of D-sialic acid aldolase through single mutations of Val251
To be Published
5B01
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STRUCTURE OF A PRENYLTRANSFERASE IN ITS UNBOUND FORM
Descriptor:MoeN5
Authors:Ko, T.-P., Zhang, L., Chen, C.-C., Guo, R.-T.
Deposit date:2015-10-27
Release date:2016-11-02
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structure and function of a prenyltransferase
To Be Published
5GWV
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STRUCTURE OF MOEN5-SSO7D FUSION PROTEIN IN COMPLEX WITH A SUBSTRATE ANALOGUE
Descriptor:MoeN5,DNA-binding protein 7d, (2R)-3-dimethoxyphosphoryloxy-2-[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoic acid
Authors:Ko, T.-P., Guo, R.-T., Chen, C.-C.
Deposit date:2016-09-14
Release date:2017-09-20
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
5GWW
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STRUCTURE OF MOEN5-SSO7D FUSION PROTEIN IN COMPLEX WITH A PERMETHYLATED SUBSTRATE ANALOGUE
Descriptor:MoeN5,DNA-binding protein 7d, methyl (2R)-3-dimethoxyphosphoryloxy-2-[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoate
Authors:Ko, T.-P., Guo, R.-T., Chen, C.-C.
Deposit date:2016-09-14
Release date:2017-09-20
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
1DGR
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REFINED CRYSTAL STRUCTURE OF CANAVALIN FROM JACK BEAN
Descriptor:CANAVALIN, PHOSPHATE ION
Authors:Ko, T.-P., McPherson, A.
Deposit date:1999-11-25
Release date:1999-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray diffraction and atomic force microscopy analysis of twinned crystals: rhombohedral canavalin.
Acta Crystallogr.,Sect.D, 57, 2001
1DGW
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STRUCTURE OF THE RHOMBOHEDRAL CRYSTAL OF CANAVALIN FROM JACK BEAN
Descriptor:CANAVALIN, PHOSPHATE ION
Authors:Ko, T.-P., McPherson, A.
Deposit date:1999-11-26
Release date:1999-12-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray diffraction and atomic force microscopy analysis of twinned crystals: rhombohedral canavalin.
Acta Crystallogr.,Sect.D, 57, 2001
2CAU
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CANAVALIN FROM JACK BEAN
Descriptor:PROTEIN (CANAVALIN)
Authors:Ko, T.-P., Day, J., Macpherson, A.
Deposit date:1998-11-20
Release date:1998-11-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The refined structure of canavalin from jack bean in two crystal forms at 2.1 and 2.0 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
2CAV
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CANAVALIN FROM JACK BEAN
Descriptor:PROTEIN (CANAVALIN)
Authors:Ko, T.-P., Day, J., Macpherson, A.
Deposit date:1998-11-20
Release date:1998-11-25
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:The refined structure of canavalin from jack bean in two crystal forms at 2.1 and 2.0 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
1M7J
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CRYSTAL STRUCTURE OF D-AMINOACYLASE DEFINES A NOVEL SUBSET OF AMIDOHYDROLASES
Descriptor:D-aminoacylase, ZINC ION, ACETATE ION
Authors:Liaw, S.-H., Chen, S.-J., Ko, T.-P., Hsu, C.-S., Wang, A.H.-J., Tsai, Y.-C.
Deposit date:2002-07-22
Release date:2003-02-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of D-Aminoacylase from Alcaligenes faecalis DA1. A NOVEL SUBSET OF AMIDOHYDROLASES AND INSIGHTS INTO THE ENZYME MECHANISM.
J.Biol.Chem., 278, 2003
1UEH
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E. COLI UNDECAPRENYL PYROPHOSPHATE SYNTHASE IN COMPLEX WITH TRITON X-100, MAGNESIUM AND SULFATE
Descriptor:undecaprenyl pyrophosphate synthase, SULFATE ION, MAGNESIUM ION, ...
Authors:Chang, S.-Y., Ko, T.-P., Liang, P.-H., Wang, A.H.-J.
Deposit date:2003-05-15
Release date:2003-08-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Catalytic mechanism revealed by the crystal structure of undecaprenyl pyrophosphate synthase in complex with sulfate, magnesium, and triton
J.Biol.Chem., 278, 2003
1V7U
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CRYSTAL STRUCTURE OF UNDECAPRENYL PYROPHOSPHATE SYNTHASE WITH FARNESYL PYROPHOSPHATE
Descriptor:Undecaprenyl pyrophosphate synthetase, FARNESYL DIPHOSPHATE
Authors:Chang, S.-Y., Ko, T.-P., Chen, A.P.-C., Wang, A.H.-J., Liang, P.-H.
Deposit date:2003-12-24
Release date:2004-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Substrate binding mode and reaction mechanism of undecaprenyl pyrophosphate synthase deduced from crystallographic studies
Protein Sci., 13, 2004
1WM2
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CRYSTAL STRUCTURE OF HUMAN SUMO-2 PROTEIN
Descriptor:Ubiquitin-like protein SMT3B
Authors:Huang, W.-C., Ko, T.-P., Li, S.S.-L., Wang, A.H.-J.
Deposit date:2004-07-02
Release date:2004-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution: implication on the functional differences of SUMO proteins
Eur.J.Biochem., 271, 2004
1WM3
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CRYSTAL STRUCTURE OF HUMAN SUMO-2 PROTEIN
Descriptor:Ubiquitin-like protein SMT3B
Authors:Huang, W.-C., Ko, T.-P., Li, S.S.-L., Wang, A.H.-J.
Deposit date:2004-07-02
Release date:2004-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution: implication on the functional differences of SUMO proteins
Eur.J.Biochem., 271, 2004
1WTO
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D DOUBLE MUTANT V26F/M29F IN COMPLEX WITH DNA GCGATCGC
Descriptor:5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTP
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29F IN COMPLEX WITH DNA GCGA(UBR)CGC
Descriptor:5'-D(*GP*CP*GP*AP*(BRU)P*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTQ
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29F IN COMPLEX WITH DNA GTAATTAC
Descriptor:5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTR
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29A IN COMPLEX WITH DNA GCGATCGC
Descriptor:5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTV
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29A IN COMPLEX WITH DNA GTAATTAC
Descriptor:5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTW
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT V26A IN COMPLEX WITH DNA GCGATCGC
Descriptor:5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTX
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT V26A IN COMPLEX WITH DNA GTAATTAC
Descriptor:5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1XSD
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CRYSTAL STRUCTURE OF THE BLAI REPRESSOR IN COMPLEX WITH DNA
Descriptor:5'-D(P*TP*AP*CP*TP*AP*CP*AP*TP*AP*TP*GP*TP*AP*GP*TP*A)-3', penicillinase repressor
Authors:Safo, M.K., Ko, T.-P., Musayev, F.N., Zhao, Q., Robinson, H., Scarsdale, N., Wang, A.H.-J., Archer, G.L.
Deposit date:2004-10-19
Release date:2005-03-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of the BlaI repressor from Staphylococcus aureus and its complex with DNA: insights into transcriptional regulation of the bla and mec operons
J.Bacteriol., 187, 2005
1XYI
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D DOUBLE MUTANT VAL26ALA/MET29ALA IN COMPLEX WITH DNA GCGATCGC
Descriptor:5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y., Ko, T.-P., Lin, T.-W., Chou, C.-C., Chen, C.-J., Wang, A.H.-J.
Deposit date:2004-11-10
Release date:2005-02-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
Nucleic Acids Res., 33, 2005
2DH4
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GERANYLGERANYL PYROPHOSPHATE SYNTHASE
Descriptor:YPL069C, MAGNESIUM ION
Authors:Chang, T.-H., Guo, R.-T., Ko, T.-P., Wang, A.H., Liang, P.-H.
Deposit date:2006-03-22
Release date:2006-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal Structure of Type-III Geranylgeranyl Pyrophosphate Synthase from Saccharomyces cerevisiae and the Mechanism of Product Chain Length Determination.
J.Biol.Chem., 281, 2006