Geranylgeranyl pyrophosphate synthase

Summary for 2DH4

DescriptorYPL069C, MAGNESIUM ION (3 entities in total)
Functional Keywordsalpha helix, prenyl transferase, pyrophosphate, transferase
Biological sourceSaccharomyces cerevisiae (baker's yeast)
Cellular locationCytoplasm (By similarity) Q12051
Total number of polymer chains2
Total molecular weight78646.73
Chang, T.-H.,Guo, R.-T.,Ko, T.-P.,Wang, A.H.,Liang, P.-H. (deposition date: 2006-03-22, release date: 2006-04-04, Last modification date: 2011-07-13)
Primary citation
Chang, T.-H.,Guo, R.-T.,Ko, T.-P.,Wang, A.H.,Liang, P.-H.
Crystal Structure of Type-III Geranylgeranyl Pyrophosphate Synthase from Saccharomyces cerevisiae and the Mechanism of Product Chain Length Determination.
J.Biol.Chem., 281:14991-15000, 2006
PubMed: 16554305 (PDB entries with the same primary citation)
DOI: 10.1074/jbc.M512886200
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.24415 0.5% 2.6% 10.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-28