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8KCE
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BU of 8kce by Molmil
Structure of RvY_06210 at 1.05 angstrom resolution
Descriptor: MAGNESIUM ION, RvY_06210, ZINC ION
Authors:Kato, S, Fukuda, Y, Inoue, T.
Deposit date:2023-08-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
8W9K
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BU of 8w9k by Molmil
Structure of apo RvY_06210
Descriptor: RvY_06210
Authors:Kato, S, Fukuda, Y, Inoue, T.
Deposit date:2023-09-05
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
8WAI
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BU of 8wai by Molmil
Structure of RvY_06210 at 1.45 angstrom resolution
Descriptor: 1,2-ETHANEDIOL, RvY_06210, ZINC ION
Authors:Kato, S, Fukuda, Y, Inoue, T.
Deposit date:2023-09-07
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
1IYM
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BU of 1iym by Molmil
RING-H2 finger domain of EL5
Descriptor: EL5, ZINC ION
Authors:Katoh, E, Katoh, S, Minami, E, Yamazaki, T.
Deposit date:2002-08-30
Release date:2003-07-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High Precision NMR Structure and Function of the RING-H2 Finger Domain of EL5, a Rice Protein Whose Expression Is Increased upon Exposure to Pathogen-derived Oligosaccharides
J.Biol.Chem., 278, 2003
2RPS
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BU of 2rps by Molmil
Solution structure of a novel insect chemokine isolated from integument
Descriptor: Chemokine
Authors:Kamiya, M, Nakatogawa, S, Oda, Y, Kamijima, T, Aizawa, T, Demura, M, Hayakawa, Y, Kawano, K.
Deposit date:2008-07-28
Release date:2009-06-16
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:A novel peptide mediates aggregation and migration of hemocytes from an insect
Curr.Biol., 19, 2009
6R83
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BU of 6r83 by Molmil
CryoEM structure and molecular model of squid hemocyanin (Todarodes pacificus , TpH)
Descriptor: Hemocyanin subunit 1
Authors:Tanaka, Y, Kato, S, Stabrin, M, Raunser, S, Matsui, T, Gatsogiannis, C.
Deposit date:2019-03-31
Release date:2019-05-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Cryo-EM reveals the asymmetric assembly of squid hemocyanin.
Iucrj, 6, 2019
2JNV
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BU of 2jnv by Molmil
Solution structure of C-terminal domain of NifU-like protein from Oryza sativa
Descriptor: NifU-like protein 1, chloroplast
Authors:Saio, T, Ogura, K, Kumeta, H, Yokochi, M, Katoh, S, Katoh, E, Inagaki, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-06
Release date:2007-12-18
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The cooperative role of OsCnfU-1A domain I and domain II in the iron sulphur cluster transfer process as revealed by NMR
J.Biochem.(Tokyo), 142, 2007
1TH5
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BU of 1th5 by Molmil
Solution structure of C-terminal domain of NifU-like protein from Oryza sativa
Descriptor: NifU1
Authors:Kumeta, H, Ogura, K, Asayama, M, Katoh, S, Katoh, E, Inagaki, F.
Deposit date:2004-06-01
Release date:2005-09-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The NMR structure of the domain II of a chloroplastic NifU-like protein OsNifU1A.
J.Biomol.Nmr, 38, 2007
2ZOM
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BU of 2zom by Molmil
Crystal structure of CutA1 from Oryza sativa
Descriptor: GLYCEROL, Protein CutA, chloroplast, ...
Authors:Kezuka, Y, Bagautdinov, B, Katoh, S, Ohtake, Y, Yutani, K, Nonaka, T, Katoh, E.
Deposit date:2008-05-23
Release date:2009-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Crystal structure of CutA1 from Oryza sativa
To be Published
3WPN
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BU of 3wpn by Molmil
Kinesin spindle protein Eg5 in complex with ATP-competitive inhibitor PVZB1194
Descriptor: 3'-fluoro-4'-(trifluoromethyl)biphenyl-4-sulfonamide, Kinesin-like protein KIF11
Authors:Yokoyama, H, Katoh, S, Fujii, S.
Deposit date:2014-01-14
Release date:2015-01-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of new allosteric inhibition in Kinesin spindle protein eg5
Acs Chem.Biol., 10, 2015
2CJN
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BU of 2cjn by Molmil
STRUCTURE OF FERREDOXIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: FERREDOXIN
Authors:Hatanaka, H, Tanimura, R, Katoh, S, Inagaki, F.
Deposit date:1997-02-06
Release date:1997-05-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of ferredoxin from the thermophilic cyanobacterium Synechococcus elongatus and its thermostability.
J.Mol.Biol., 268, 1997
2CJO
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BU of 2cjo by Molmil
STRUCTURE OF FERREDOXIN, NMR, 10 STRUCTURES
Descriptor: FERREDOXIN
Authors:Hatanaka, H, Tanimura, R, Katoh, S, Inagaki, F.
Deposit date:1997-02-06
Release date:1997-05-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of ferredoxin from the thermophilic cyanobacterium Synechococcus elongatus and its thermostability.
J.Mol.Biol., 268, 1997
1O16
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BU of 1o16 by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN H64D/V68S/D122N MUTANT (MET)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Phillips Jr, G.N.
Deposit date:2002-10-25
Release date:2003-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin
Biochemistry, 42, 2003
8JYG
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BU of 8jyg by Molmil
Crystal structure of Human HPSE1 in complex with inhibitor
Descriptor: (5~{S},6~{R},7~{S},8~{S})-6,7,8-tris(oxidanyl)-2-[2-(3-phenoxyphenyl)ethyl]-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mima, M, Fujimoto, N, Imai, Y.
Deposit date:2023-07-03
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based lead optimization to improve potency and selectivity of a novel tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid series of heparanase-1 inhibitor.
Bioorg.Med.Chem., 93, 2023
4YD9
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BU of 4yd9 by Molmil
Crystal structure of squid hemocyanin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CU2-O2 CLUSTER, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Matsuno, A, Gai, Z, Kato, K, Tanaka, Y, Yao, M.
Deposit date:2015-02-21
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of the 3.8-MDa Respiratory Supermolecule Hemocyanin at 3.0 angstrom Resolution
Structure, 23, 2015
1LUE
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BU of 1lue by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN H64D/V68A/D122N MUTANT (MET)
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Phillips Jr, G.N.
Deposit date:2002-05-22
Release date:2003-11-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin
Biochemistry, 42, 2003
4TV7
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BU of 4tv7 by Molmil
Crystal structure of Bacillus subtilis GabR at 2.05 Angstroms resolution
Descriptor: HTH-type transcriptional regulatory protein GabR
Authors:Goto, M, Okuda, K, Yoshimura, T.
Deposit date:2014-06-26
Release date:2014-12-24
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Role of the aminotransferase domain in Bacillus subtilis GabR, a pyridoxal 5'-phosphate-dependent transcriptional regulator
Mol. Microbiol., 95, 2015
8K5W
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BU of 8k5w by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: 2-[[5-fluoranyl-7-(methylamino)-1H-indol-2-yl]carbonyl]-N-(2-pyrrol-1-ylethyl)-3,4-dihydro-1H-isoquinoline-7-carboxamide, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5V
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BU of 8k5v by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: 6,7-dihydro-4H-[1,3]oxazolo[4,5-c]pyridin-5-yl-(7-ethyl-2H-indazol-3-yl)methanone, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5Y
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BU of 8k5y by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: (3-azanyl-4-fluoranyl-5,7,8,9-tetrahydropyrido[4,3-c]azepin-6-yl)-[6-(2-oxidanylpropan-2-yl)-1H-indol-2-yl]methanone, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5X
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BU of 8k5x by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: (6-cyclopropyl-1~{H}-indol-2-yl)-(5,7,8,9-tetrahydropyrido[4,3-c]azepin-6-yl)methanone, CALCIUM ION, CHLORIDE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8YVP
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BU of 8yvp by Molmil
canine immunoproteasome 20S subunit in complex with compound 1
Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
Authors:Kashima, A, Arai, Y.
Deposit date:2024-03-29
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Optimization of alpha-amido boronic acids via cryo-electron microscopy analysis: Discovery of a novel highly selective immunoproteasome subunit LMP7 ( beta 5i)/LMP2 ( beta 1i) dual inhibitor.
Bioorg.Med.Chem., 109, 2024
8YPK
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BU of 8ypk by Molmil
mouse proteasome 20S subunit in complex with compound 1
Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
Authors:Kashima, A, Arai, Y.
Deposit date:2024-03-17
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Optimization of alpha-amido boronic acids via cryo-electron microscopy analysis: Discovery of a novel highly selective immunoproteasome subunit LMP7 ( beta 5i)/LMP2 ( beta 1i) dual inhibitor.
Bioorg.Med.Chem., 109, 2024
8YSX
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BU of 8ysx by Molmil
canine immunoproteasome 20S subunit in complex with compound 2
Descriptor: Proteasome subunit alpha type, Proteasome subunit beta, Proteasome subunit beta type-8, ...
Authors:Kashima, A, Arai, Y.
Deposit date:2024-03-24
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Optimization of alpha-amido boronic acids via cryo-electron microscopy analysis: Discovery of a novel highly selective immunoproteasome subunit LMP7 ( beta 5i)/LMP2 ( beta 1i) dual inhibitor.
Bioorg.Med.Chem., 109, 2024
8YVG
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BU of 8yvg by Molmil
canine immunoproteasome 20S subunit in complex with compound 1
Descriptor: Proteasome subunit alpha type, Proteasome subunit beta, Proteasome subunit beta type-8, ...
Authors:Kashima, A, Arai, Y.
Deposit date:2024-03-28
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2 Å)
Cite:Optimization of alpha-amido boronic acids via cryo-electron microscopy analysis: Discovery of a novel highly selective immunoproteasome subunit LMP7 ( beta 5i)/LMP2 ( beta 1i) dual inhibitor.
Bioorg.Med.Chem., 109, 2024

 

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