Author results

2H88
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AVIAN MITOCHONDRIAL RESPIRATORY COMPLEX II AT 1.8 ANGSTROM RESOLUTION
Descriptor:SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT, Succinate dehydrogenase Ip subunit, SUCCINATE DEHYDROGENASE CYTOCHROME B, ...
Authors:Huang, L.S., Shen, J.T., Wang, A.C., Berry, E.A.
Deposit date:2006-06-06
Release date:2006-06-20
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
2H89
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AVIAN RESPIRATORY COMPLEX II WITH MALONATE BOUND
Descriptor:SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT, Succinate dehydrogenase Ip subunit, SUCCINATE DEHYDROGENASE CYTOCHROME B, ...
Authors:Huang, L.S., Shen, J.T., Wang, A.C., Berry, E.A.
Deposit date:2006-06-06
Release date:2006-06-20
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
2FBW
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AVIAN RESPIRATORY COMPLEX II WITH CARBOXIN BOUND
Descriptor:Succinate dehydrogenase flavoprotein subunit, succinate dehydrogenase Ip subunit, Succinate dehydrogenase cytochrome B, ...
Authors:Huang, L.S., Sun, G., Cobessi, D., Wang, A.C., Shen, J.T., Tung, E.Y., Anderson, V.E., Berry, E.A.
Deposit date:2005-12-10
Release date:2005-12-20
Last modified:2014-10-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:3-nitropropionic acid is a suicide inhibitor of mitochondrial respiration that, upon oxidation by complex II, forms a covalent adduct with a catalytic base arginine in the active site of the enzyme.
J.Biol.Chem., 281, 2006
1PP9
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BOVINE CYTOCHROME BC1 COMPLEX WITH STIGMATELLIN BOUND
Descriptor:Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial, Ubiquinol-cytochrome C reductase complex core protein 2, ...
Authors:Huang, L.S., Cobessi, D., Tung, E.Y., Berry, E.A.
Deposit date:2003-06-16
Release date:2004-07-20
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern.
J.Mol.Biol., 351, 2005
1PPJ
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BOVINE CYTOCHROME BC1 COMPLEX WITH STIGMATELLIN AND ANTIMYCIN
Descriptor:Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial, Ubiquinol-cytochrome C reductase complex core protein 2, ...
Authors:Huang, L.S., Cobessi, D., Tung, E.Y., Berry, E.A.
Deposit date:2003-06-16
Release date:2004-07-20
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern.
J.Mol.Biol., 351, 2005
2A06
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BOVINE CYTOCHROME BC1 COMPLEX WITH STIGMATELLIN BOUND
Descriptor:Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial, Ubiquinol-cytochrome-c reductase complex core protein 2, ...
Authors:Huang, L.S., Cobessi, D., Tung, E.Y., Berry, E.A.
Deposit date:2005-06-16
Release date:2005-06-21
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern.
J.Mol.Biol., 351, 2005
1CFM
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CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII
Descriptor:CYTOCHROME F, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chi, Y.I., Huang, L.S., Zhang, Z., Fernandez-Velasco, J.G., Malkin, R., Berry, E.A.
Deposit date:1998-09-18
Release date:1999-04-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of a truncated form of cytochrome f from chlamydomonas reinhardtii.
Biochemistry, 39, 2000
1ZRT
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RHODOBACTER CAPSULATUS CYTOCHROME BC1 COMPLEX WITH STIGMATELLIN BOUND
Descriptor:Cytochrome b, Cytochrome c1, Ubiquinol-cytochrome c reductase iron-sulfur subunit, ...
Authors:Berry, E.A., Huang, L.S., Saechao, L.K., Pon, N.G., Valkova-Valchanov, M., Daldal, F.
Deposit date:2005-05-22
Release date:2005-06-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:X-Ray Structure of Rhodobacter Capsulatus Cytochrome bc (1): Comparison with its Mitochondrial and Chloroplast Counterparts.
Photosynth.Res., 81, 2004
3H1L
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CHICKEN CYTOCHROME BC1 COMPLEX WITH ASCOCHLORIN BOUND AT QO AND QI SITES
Descriptor:MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN I, MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2, Cytochrome b, ...
Authors:Berry, E.A., Huang, L.S., Minagawa, N.
Deposit date:2009-04-12
Release date:2010-01-05
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Ascochlorin is a novel, specific inhibitor of the mitochondrial cytochrome bc(1) complex.
Biochim.Biophys.Acta, 1797, 2010
4DL0
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CRYSTAL STRUCTURE OF THE HETEROTRIMERIC EGCHEAD PERIPHERAL STALK COMPLEX OF THE YEAST VACUOLAR ATPASE
Descriptor:V-type proton ATPase subunit C, V-type proton ATPase subunit G, V-type proton ATPase subunit E, ...
Authors:Oot, R.A., Huang, L.S., Berry, E.A., Wilkens, S.
Deposit date:2012-02-05
Release date:2012-10-10
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.905 Å)
Cite:Crystal Structure of the Yeast Vacuolar ATPase Heterotrimeric EGC(head) Peripheral Stalk Complex.
Structure, 20, 2012
4E9M
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NOD1 CARD DOMAIN WITH THREE DISULFIDE-CLINCHED, DOMAIN-SWAPPED DIMERS IN THE ASYMMETRIC UNIT
Descriptor:Nucleotide-binding oligomerization domain-containing protein 1, CITRATE ANION
Authors:Berry, E.A., Huang, L.S., Walker-Kopp, N.
Deposit date:2012-03-21
Release date:2012-04-04
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of nod1 card domain with three disulfide-clinched, domain-swapped dimers in the asymmetric unit
To be Published
4EFA
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CRYSTAL STRUCTURE OF THE HETEROTRIMERIC EGCHEAD PERIPHERAL STALK COMPLEX OF THE YEAST VACUOLAR ATPASE - SECOND CONFORMATION
Descriptor:V-type proton ATPase subunit C, V-type proton ATPase subunit G, V-type proton ATPase subunit E, ...
Authors:Oot, R.A., Huang, L.S., Berry, E.A., Wilkens, S.
Deposit date:2012-03-29
Release date:2012-10-10
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.8163 Å)
Cite:Crystal Structure of the Yeast Vacuolar ATPase Heterotrimeric EGC(head) Peripheral Stalk Complex.
Structure, 20, 2012
6MYR
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AVIAN MITOCHONDRIAL COMPLEX II WITH THIAPRONIL BOUND
Descriptor:Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, ...
Authors:Huang, L.-S., Luemmen, P., Berry, E.A.
Deposit date:2018-11-02
Release date:2019-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic studies of the binding of ligands to the Ubiquinone site of Mitochondrial Respiratory Complex II
To be published
3H1H
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CYTOCHROME BC1 COMPLEX FROM CHICKEN
Descriptor:UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN I, MITOCHONDRIAL, UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2, ...
Authors:Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.I., Kim, K.K., Hung, L.W., Crofts, A.R., Berry, E.A., Kim, S.H.
Deposit date:2009-04-12
Release date:2009-04-28
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Electron Transfer by Domain Movement in Cytochrome Bc1
Nature, 392, 1998
3H1I
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STIGMATELLIN AND ANTIMYCIN BOUND CYTOCHROME BC1 COMPLEX FROM CHICKEN
Descriptor:UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN I, MITOCHONDRIAL, UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2, ...
Authors:Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.I., Kim, K.K., Hung, L.W., Crofts, A.R., Berry, E.A., Kim, S.H.
Deposit date:2009-04-12
Release date:2009-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.53 Å)
Cite:Electron Transfer by Domain Movement in Cytochrome Bc1
Nature, 392, 1998
1F4V
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CRYSTAL STRUCTURE OF ACTIVATED CHEY BOUND TO THE N-TERMINUS OF FLIM
Descriptor:CHEMOTAXIS CHEY PROTEIN, FLAGELLAR MOTOR SWITCH PROTEIN, MAGNESIUM ION, ...
Authors:Lee, S.Y., Cho, H.S., Pelton, J.G., Yan, D., Henderson, R.K., King, D., Huang, L.S., Kustu, S., Berry, E.A., Wemmer, D.E.
Deposit date:2000-06-10
Release date:2001-01-17
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of an activated response regulator bound to its target.
Nat.Struct.Biol., 8, 2001
1JGC
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THE 2.6 A STRUCTURE RESOLUTION OF RHODOBACTER CAPSULATUS BACTERIOFERRITIN WITH METAL-FREE DINUCLEAR SITE AND HEME IRON IN A CRYSTALLOGRAPHIC SPECIAL POSITION
Descriptor:bacterioferritin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cobessi, D., Huang, L.-S., Ban, M., Pon, N.G., Daldal, F., Berry, E.A.
Deposit date:2001-06-24
Release date:2002-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The 2.6 A resolution structure of Rhodobacter capsulatus bacterioferritin with metal-free dinuclear site and heme iron in a crystallographic 'special position'.
Acta Crystallogr.,Sect.D, 58, 2002
3H1K
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CHICKEN CYTOCHROME BC1 COMPLEX WITH ZN++ AND AN IODINATED DERIVATIVE OF KRESOXIM-METHYL BOUND
Descriptor:MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN I, MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2, Cytochrome b, ...
Authors:Berry, E.A., Zhang, Z., Bellamy, H.D., Huang, L.S.
Deposit date:2009-04-12
Release date:2009-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Crystallographic location of two Zn(2+)-binding sites in the avian cytochrome bc(1) complex
Biochim.Biophys.Acta, 1459, 2000
3Q3F
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ENGINEERING DOMAIN-SWAPPED BINDING INTERFACES BY MUTUALLY EXCLUSIVE FOLDING: INSERTION OF UBIQUITIN INTO POSITION 103 OF BARNASE
Descriptor:Ribonuclease/Ubiquitin chimeric protein, SULFATE ION
Authors:Ha, J.-H., Karchin, J.M., Walker-Kopp, N., Huang, L.-S., Berry, E.A., Loh, S.N.
Deposit date:2010-12-21
Release date:2012-01-25
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Engineering domain-swapped binding interfaces by mutually exclusive folding.
J.Mol.Biol., 416, 2012
3TGU
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CYTOCHROME BC1 COMPLEX FROM CHICKEN WITH PFVS-DESIGNED MOA INHIBITOR BOUND
Descriptor:Mitochondrial ubiquinol-cytochrome-c reductase complex core protein i, Mitochondrial ubiquinol-cytochrome-c reductase complex core protein 2, Cytochrome b, ...
Authors:Huang, L.-S., Yang, G.-F., Berry, E.A.
Deposit date:2011-08-17
Release date:2012-07-04
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Computational discovery of picomolar Q(o) site inhibitors of cytochrome bc1 complex.
J.Am.Chem.Soc., 134, 2012
1YQ3
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AVIAN RESPIRATORY COMPLEX II WITH OXALOACETATE AND UBIQUINONE
Descriptor:Succinate dehydrogenase flavoprotein subunit, succinate dehydrogenase Ip subunit, SUCCINATE DEHYDROGENASE CYTOCHROME B, ...
Authors:Huang, L., Cobessi, D., Tung, E.Y., Berry, E.A.
Deposit date:2005-02-01
Release date:2005-12-20
Last modified:2016-02-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme
J.Biol.Chem., 281, 2006
1YQ4
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AVIAN RESPIRATORY COMPLEX II WITH 3-NITROPROPIONATE AND UBIQUINONE
Descriptor:Succinate dehydrogenase flavoprotein subunit, succinate dehydrogenase Ip subunit, SUCCINATE DEHYDROGENASE CYTOCHROME B, ...
Authors:Huang, L., Sun, G., Cobessi, D., Wang, A., Shen, J.T., Tung, E.Y., Anderson, V.E., Berry, E.A.
Deposit date:2005-02-01
Release date:2005-12-20
Last modified:2016-02-17
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme
J.Biol.Chem., 281, 2006
3CWB
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CHICKEN CYTOCHROME BC1 COMPLEX INHIBITED BY AN IODINATED ANALOGUE OF THE POLYKETIDE CROCACIN-D
Descriptor:MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN I, MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2, Cytochrome b, ...
Authors:Huang, L., Cromartie, T., Viner, R., Crowley, P.J., Berry, E.A.
Deposit date:2008-04-21
Release date:2008-08-12
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:The role of molecular modeling in the design of analogues of the fungicidal natural products crocacins A and D.
Bioorg.Med.Chem., 16, 2008