1IK1 | | SOLUTION STRUCTURE OF AN RNA HAIRPIN FROM HRV-14 | | Descriptor: | 5'-R(*GP*GP*UP*AP*CP*UP*AP*UP*GP*UP*AP*CP*CP*A)-3' | | Authors: | Huang, H., Alexandrov, A., Chen, X., Barnes III, T.W., Zhang, H., Dutta, K., Pascal, S.M. | | Deposit date: | 2001-05-01 | | Release date: | 2001-07-18 | | Last modified: | 2018-01-31 | | Method: | SOLUTION NMR | | Cite: | Structure of an RNA hairpin from HRV-14.
Biochemistry, 40, 2001
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2K8T | | SOLUTION NMR STRUCTURE OF TRANS-4-HYDROXYNONENAL DERIVED DG ADDUCT OF (6R,8S,11R)-CONFIGURATION OPPOSITE DC | | Descriptor: | 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DCP*DGP*DCP*DTP*DAP*DGP*DC)-3', (2S,5R)-5-pentyltetrahydrofuran-2-ol | | Authors: | Huang, H., Wang, H., Qi, N., Lloyd, R.S., Rizzo, C.J., Stone, M.P. | | Deposit date: | 2008-09-23 | | Release date: | 2008-11-04 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | The stereochemistry of trans-4-hydroxynonenal-derived exocyclic 1,N2-2'-deoxyguanosine adducts modulates formation of interstrand cross-links in the 5'-CpG-3' sequence.
Biochemistry, 47, 2008
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2K8U | | SOLUTION NMR STRUCTURE OF TRANS-4-HYDROXYNONENAL DERIVED DG ADDUCT OF (6S,8R,11S)-CONFIGURATION MATCHED WITH DC | | Descriptor: | 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DCP*DGP*DCP*DTP*DAP*DGP*DC)-3', (2S,5R)-5-pentyltetrahydrofuran-2-ol | | Authors: | Huang, H., Wang, H., Qi, N., Lloyd, R.S., Rizzo, C.J., Stone, M.P. | | Deposit date: | 2008-09-23 | | Release date: | 2008-11-04 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | The stereochemistry of trans-4-hydroxynonenal-derived exocyclic 1,N2-2'-deoxyguanosine adducts modulates formation of interstrand cross-links in the 5'-CpG-3' sequence.
Biochemistry, 47, 2008
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2KAR | | HNE-DG ADDUCT MISMATCHED WITH DA IN ACIDIC SOLUTION | | Descriptor: | 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DAP*DGP*DCP*DTP*DAP*DGP*DC)-3', (4S)-nonane-1,4-diol | | Authors: | Huang, H., Wang, H., Lloyd, R.S., Rizzo, C.J., Stone, M.P. | | Deposit date: | 2008-11-13 | | Release date: | 2009-05-26 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Conformational interconversion of the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N(2)-deoxyguanosine adduct when mismatched with deoxyadenosine in DNA
Chem.Res.Toxicol., 22, 2009
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2KAS | | HNE-DG ADDUCT MISMATCHED WITH DA IN BASIC SOLUTION | | Descriptor: | 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DAP*DGP*DCP*DTP*DAP*DGP*DC)-3', (4S)-nonane-1,4-diol | | Authors: | Huang, H., Wang, H., Lloyd, R.S., Rizzo, C.J., Stone, M.P. | | Deposit date: | 2008-11-13 | | Release date: | 2009-05-26 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Conformational interconversion of the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N(2)-deoxyguanosine adduct when mismatched with deoxyadenosine in DNA
Chem.Res.Toxicol., 22, 2009
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2KEB | | NMR SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF THE DNA POLYMERASE ALPHA P68 SUBUNIT | | Descriptor: | DNA polymerase subunit alpha B | | Authors: | Huang, H., Weiner, B.E., Zhang, H., Fuller, B.E., Gao, Y., Wile, B.M., Chazin, W.J., Fanning, E. | | Deposit date: | 2009-01-28 | | Release date: | 2010-02-02 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Structure of a DNA polymerase alpha-primase domain that docks on the SV40 helicase and activates the viral primosome.
J.Biol.Chem., 285, 2010
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2KSZ | |
2LBI | | N2-DG:N2-DG INTERSTRAND CROSS-LINK INDUCED BY TRANS-4-HYDROXYNONENAL | | Descriptor: | DNA (5'-D(*GP*CP*TP*AP*GP*CP*GP*AP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*TP*CP*GP*CP*TP*AP*GP*C)-3'), (4S)-nonane-1,4-diol | | Authors: | Huang, H., Kozekov, I.D., Wang, H., Kozekova, A., Rizzo, C.J., Stone, M.P. | | Deposit date: | 2011-03-31 | | Release date: | 2012-04-04 | | Method: | SOLUTION NMR | | Cite: | Formation of a N2-dG:N2-dG carbinolamine DNA cross-link by the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N2-dG adduct.
J.Am.Chem.Soc., 133, 2011
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2LG2 | | STRUCTURE OF THE DUPLEX CONTAINING HNE DERIVED (6S,8R,11S) N2-DG CYCLIC HEMIACETAL WHEN PLACED OPPOSITE DT | | Descriptor: | DNA (5'-D(*GP*CP*TP*AP*GP*CP*GP*AP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*TP*TP*GP*CP*TP*AP*GP*C)-3'), (2R,5S)-5-pentyltetrahydrofuran-2-ol | | Authors: | Huang, H., Wang, H., Kozekova, A., Lloyd, R.S., Rizzo, C.J., Stone, M.P. | | Deposit date: | 2011-07-19 | | Release date: | 2012-08-01 | | Method: | SOLUTION NMR | | Cite: | Ring-chain tautomerization of trans-4-hydroxynonenal derived (6S,8R,11S) gamma-hydroxy-1,N2-propano-deoxyguanosine adduct when placed opposite 2'-deoxythymidine in duplex
To be Published
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2LG3 | | STRUCTURE OF THE DUPLEX CONTAINING HNE DERIVED (6S,8R,11S) GAMMA-HO-PDG WHEN PLACED OPPOSITE DT | | Descriptor: | DNA (5'-D(*GP*CP*TP*AP*GP*CP*GP*AP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*TP*TP*GP*CP*TP*AP*GP*C)-3'), (4S)-nonane-1,4-diol | | Authors: | Huang, H., Wang, H., Kozekova, A., Lloyd, R.S., Rizzo, C.J., Stone, M.P. | | Deposit date: | 2011-07-19 | | Release date: | 2012-08-01 | | Method: | SOLUTION NMR | | Cite: | Ring-chain tautomerization of trans-4-hydroxynonenal derived (6S,8R,11S) gamma-hydroxy-1,N2-propano-deoxyguanosine adduct when placed opposite 2'-deoxythymidine in duplex
To be Published
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2L4H | | THE SOLUTION STRUCTURE OF CALCIUM BOUND CIB1 | | Descriptor: | Calcium and integrin-binding protein 1, CALCIUM ION | | Authors: | Huang, H., Vogel, H.J. | | Deposit date: | 2010-10-06 | | Release date: | 2011-03-09 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution Structures of Ca2+-CIB1 and Mg2+-CIB1 and Their Interactions with the Platelet Integrin {alpha}IIb Cytoplasmic Domain.
J.Biol.Chem., 286, 2011
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2L4I | | THE SOLUTION STRUCTURE OF MAGNESIUM BOUND CIB1 | | Descriptor: | Calcium and integrin-binding protein 1, MAGNESIUM ION | | Authors: | Huang, H., Vogel, H.J. | | Deposit date: | 2010-10-06 | | Release date: | 2011-03-09 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution Structures of Ca2+-CIB1 and Mg2+-CIB1 and Their Interactions with the Platelet Integrin {alpha}IIb Cytoplasmic Domain.
J.Biol.Chem., 286, 2011
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3CQ0 | | CRYSTAL STRUCTURE OF TAL2_YEAST | | Descriptor: | Putative transaldolase YGR043C, 1,2-ETHANEDIOL, TETRAETHYLENE GLYCOL, ... | | Authors: | Huang, H., Niu, L., Teng, M. | | Deposit date: | 2008-04-01 | | Release date: | 2009-04-07 | | Last modified: | 2017-10-25 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | The crystal structure and identification of NQM1/YGR043C, a transaldolase from Saccharomyces cerevisiae
Proteins, 73, 2008
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2G4A | |
2JAZ | |
2JB0 | |
2JBG | |
2KNK | | STRUCTURE OF THE TRIMETHYLENE N2-DG:N2-DG INTERSTRAND CROSS-LINK IN 5'-CPG-3' SEQUENCE CONTEXT | | Descriptor: | DNA (5'-D(*AP*GP*GP*CP*GP*CP*CP*T)-3'), PROPANE | | Authors: | Huang, H., Dooley, P.A., Harris, C.M., Harris, T.M., Stone, M.P. | | Deposit date: | 2009-08-26 | | Release date: | 2009-09-29 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Differential base stacking interactions induced by trimethylene interstrand DNA cross-links in the 5'-CpG-3' and 5'-GpC-3' sequence contexts.
Chem.Res.Toxicol., 22, 2009
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2KNL | | STRUCTURE OF THE TRIMETHYLENE N2-DG:N2-DG INTERSTRAND CROSS-LINK IN THE 5'-GPC-3' SEQUENCE CONTEXT | | Descriptor: | DNA (5'-D(*TP*CP*CP*GP*CP*GP*GP*A)-3'), PROPANE | | Authors: | Huang, H., Dooley, P.A., Harris, C.M., Harris, T.M., Stone, M.P. | | Deposit date: | 2009-08-26 | | Release date: | 2009-09-29 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Differential base stacking interactions induced by trimethylene interstrand DNA cross-links in the 5'-CpG-3' and 5'-GpC-3' sequence contexts.
Chem.Res.Toxicol., 22, 2009
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2KV6 | | TETRAPEPTIDE KWKK CONJUGATED TO OLIGONUCLEOTIDE DUPLEX BY A TRIMETHYLENE TETHER | | Descriptor: | 5'-D(*GP*CP*TP*AP*GP*CP*GP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*CP*GP*CP*TP*AP*GP*C)-3', KWKK Tetrapeptide | | Authors: | Huang, H., Kozekov, I.D., Kozekova, A., Rizzo, C.J., McCullough, A., LLoyd, R.S., Stone, M.P. | | Deposit date: | 2010-03-08 | | Release date: | 2010-07-21 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Minor Groove Orientation of the KWKK Peptide Tethered via the N-Terminal Amine to the Acrolein-Derived 1,N(2)-gamma-Hydroxypropanodeoxyguanosine Lesion with a Trimethylene Linkage .
Biochemistry, 49, 2010
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2LFA | | OLIGONUCLEOTIDE DUPLEX CONTANING (5'S)-8,5'-CYCLO-2'-DEOXYGUANSINE | | Descriptor: | DNA (5'-D(*GP*TP*GP*CP*(2LF)P*TP*GP*TP*TP*TP*GP*T)-3'), DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*CP*GP*CP*AP*C)-3') | | Authors: | Huang, H., Das, R.S., Basu, A., Stone, M.P. | | Deposit date: | 2011-06-29 | | Release date: | 2012-01-04 | | Method: | SOLUTION NMR | | Cite: | Structure of (5'S)-8,5'-Cyclo-2'-deoxyguanosine in DNA.
J.Am.Chem.Soc., 133, 2011
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2LFX | | STRUCTURE OF THE DUPLEX WHEN (5'S)-8,5'-CYCLO-2'-DEOXYGUANOSINE IS PLACED OPPOSITE DT | | Descriptor: | DNA (5'-D(*GP*TP*GP*CP*(2LF)P*TP*GP*TP*TP*TP*GP*T)-3'), DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*TP*GP*CP*AP*C)-3') | | Authors: | Huang, H., Das, R.S., Basu, A., Stone, M.P. | | Deposit date: | 2011-07-18 | | Release date: | 2012-06-27 | | Method: | SOLUTION NMR | | Cite: | Structures of (5'S)-8,5'-Cyclo-2'-deoxyguanosine Mismatched with dA or dT.
Chem.Res.Toxicol., 25, 2012
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2LFY | | STRUCTURE OF THE DUPLEX WHEN (5'S)-8,5'-CYCLO-2'-DEOXYGUANOSINE IS PLACED OPPOSITE DA | | Descriptor: | DNA (5'-D(*GP*TP*GP*CP*(2LF)P*TP*GP*TP*TP*TP*GP*T)-3'), DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*AP*GP*CP*AP*C)-3') | | Authors: | Huang, H., Das, R.S., Basu, A., Stone, M.P. | | Deposit date: | 2011-07-18 | | Release date: | 2012-06-27 | | Method: | SOLUTION NMR | | Cite: | Structures of (5'S)-8,5'-Cyclo-2'-deoxyguanosine Mismatched with dA or dT.
Chem.Res.Toxicol., 25, 2012
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2LG0 | | STRUCTURE OF THE DUPLEX CONTAINING (5'S)-8,5'-CYCLO-2'-DEOXYADENOSINE | | Descriptor: | DNA (5'-D(*GP*TP*GP*CP*(02I)P*TP*GP*TP*TP*TP*GP*T)-3'), DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*TP*GP*CP*AP*C)-3') | | Authors: | Huang, H., Das, R.S., Basu, A., Stone, M.P. | | Deposit date: | 2011-07-18 | | Release date: | 2012-06-27 | | Method: | SOLUTION NMR | | Cite: | Structure of (5'S)-8,5'-cyclo-2'-deoxyguanosine in DNA.
J.Am.Chem.Soc., 133, 2011
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2LM5 | |
