Author results

6BY7
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FOLDING DNA INTO A LIPID-CONJUGATED NANO-BARREL FOR CONTROLLED RECONSTITUTION OF MEMBRANE PROTEINS
Descriptor:DNA (52-MER), DNA (55-MER), DNA (5'-D(*AP*AP*TP*AP*AP*CP*GP*GP*CP*TP*CP*AP*GP*AP*GP*C)-3'), ...
Authors:Dong, Y., Chen, S., Zhang, S., Sodroski, J., Yang, Z., Liu, D., Mao, Y.
Deposit date:2017-12-20
Release date:2018-02-28
Last modified:2019-04-17
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Folding DNA into a Lipid-Conjugated Nanobarrel for Controlled Reconstitution of Membrane Proteins.
Angew. Chem. Int. Ed. Engl., 57, 2018
1P9E
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CRYSTAL STRUCTURE ANALYSIS OF METHYL PARATHION HYDROLASE FROM PSEUDOMONAS SP WBC-3
Descriptor:Methyl Parathion Hydrolase, ZINC ION, POTASSIUM ION, ...
Authors:Dong, Y., Sun, L., Bartlam, M., Rao, Z., Zhang, X.
Deposit date:2003-05-11
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Analysis of Methyl Parathion Hydrolase from Pseudomonas sp WBC-3
To be Published
5YIK
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STRUCTURE OF A LEGIONELLA EFFECTOR WITH ITS SUBSTRATE
Descriptor:SdeA, ubiquitin
Authors:Feng, Y., Dong, Y., Liu, Z.
Deposit date:2017-10-05
Release date:2018-05-30
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5YIM
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STRUCTURE OF A LEGIONELLA EFFECTOR
Descriptor:SdeA
Authors:Feng, Y., Dong, Y., Wang, W.
Deposit date:2017-10-05
Release date:2018-05-30
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (3.394 Å)
Cite:Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5XX0
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CRYSTAL STRUCTURE OF THE FOUR N-TERMINAL IMMUNOGLOGULIN DOMAINS OF SIDEKICK-2 PROTEIN
Descriptor:Protein sidekick-2
Authors:Dong, Y., Tang, H., He, Y.
Deposit date:2017-06-30
Release date:2018-08-29
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Architecture of cell-cell adhesion mediated by sidekicks.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4RLJ
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CRYSTAL STRUCTURE OF (3R)-HYDROXYACYL-ACP DEHYDRATASE HADAB HETERO-DIMER FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor:(3R)-hydroxyacyl-ACP dehydratase subunit HadA, (3R)-hydroxyacyl-ACP dehydratase subunit HadB, GLYCEROL, ...
Authors:Li, J., Dong, Y., Rao, Z.H.
Deposit date:2014-10-17
Release date:2015-10-21
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular basis for the inhibition of beta-hydroxyacyl-ACP dehydratase HadAB complex from Mycobacterium tuberculosis by flavonoid inhibitors.
Protein Cell, 6, 2015
4RLT
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CRYSTAL STRUCTURE OF (3R)-HYDROXYACYL-ACP DEHYDRATASE HADAB HETERO-DIMER FROM MYCOBACTERIUM TUBERCULOSIS COMPLEXED WITH FISETIN
Descriptor:(3R)-hydroxyacyl-ACP dehydratase subunit HadA, (3R)-hydroxyacyl-ACP dehydratase subunit HadB, 3,7,3',4'-TETRAHYDROXYFLAVONE, ...
Authors:Li, J., Dong, Y., Rao, Z.H.
Deposit date:2014-10-18
Release date:2015-10-21
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Molecular basis for the inhibition of beta-hydroxyacyl-ACP dehydratase HadAB complex from Mycobacterium tuberculosis by flavonoid inhibitors.
Protein Cell, 6, 2015
4RLU
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CRYSTAL STRUCTURE OF (3R)-HYDROXYACYL-ACP DEHYDRATASE HADAB HETERO-DIMER FROM MYCOBACTERIUM TUBERCULOSIS COMPLEXED WITH 2',4,4'-TRIHYDROXYCHALCONE
Descriptor:(3R)-hydroxyacyl-ACP dehydratase subunit HadA, (3R)-hydroxyacyl-ACP dehydratase subunit HadB, 2',4,4'-TRIHYDROXYCHALCONE, ...
Authors:Li, J., Dong, Y., Rao, Z.H.
Deposit date:2014-10-18
Release date:2015-10-21
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Molecular basis for the inhibition of beta-hydroxyacyl-ACP dehydratase HadAB complex from Mycobacterium tuberculosis by flavonoid inhibitors.
Protein Cell, 6, 2015
4RLW
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CRYSTAL STRUCTURE OF (3R)-HYDROXYACYL-ACP DEHYDRATASE HADAB HETERO-DIMER FROM MYCOBACTERIUM TUBERCULOSIS COMPLEXED WITH BUTEIN
Descriptor:(3R)-hydroxyacyl-ACP dehydratase subunit HadA, (3R)-hydroxyacyl-ACP dehydratase subunit HadB, (2E)-1-(2,4-dihydroxyphenyl)-3-(3,4-dihydroxyphenyl)prop-2-en-1-one, ...
Authors:Li, J., Dong, Y., Rao, Z.H.
Deposit date:2014-10-18
Release date:2015-10-21
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Molecular basis for the inhibition of beta-hydroxyacyl-ACP dehydratase HadAB complex from Mycobacterium tuberculosis by flavonoid inhibitors.
Protein Cell, 6, 2015
5W3E
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CRYOEM STRUCTURE OF RHINOVIRUS B14 IN COMPLEX WITH C5 FAB (33 DEGREES CELSIUS, MOLAR RATIO 1:3, FULL PARTICLE)
Descriptor:C5 antibody variable heavy domain, C5 antibody variable light domain, viral protein 1, ...
Authors:Liu, Y., Dong, Y., Rossmann, M.G.
Deposit date:2017-06-07
Release date:2017-07-12
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Antibody-induced uncoating of human rhinovirus B14.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W3L
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CRYOEM STRUCTURE OF RHINOVIRUS B14 IN COMPLEX WITH C5 FAB (4 DEGREES CELSIUS, MOLAR RATIO 1:3, FULL PARTICLE)
Descriptor:viral protein 1, viral protein 3, viral protein 2, ...
Authors:Liu, Y., Dong, Y., Rossmann, M.G.
Deposit date:2017-06-08
Release date:2017-07-12
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Antibody-induced uncoating of human rhinovirus B14.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W3M
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CRYOEM STRUCTURE OF RHINOVIRUS B14 IN COMPLEX WITH C5 FAB (33 DEGREES CELSIUS, MOLAR RATIO 1:1, FULL PARTICLE)
Descriptor:C5 antibody variable heavy domain, C5 antibody variable light domain, viral protein 1, ...
Authors:Liu, Y., Dong, Y., Rossmann, M.G.
Deposit date:2017-06-08
Release date:2017-07-12
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:Antibody-induced uncoating of human rhinovirus B14.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W3O
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CRYOEM STRUCTURE OF RHINOVIRUS B14 IN COMPLEX WITH C5 FAB (33 DEGREES CELSIUS, MOLAR RATIO 1:3, EMPTY PARTICLE)
Descriptor:C5 antibody variable heavy domain, C5 antibody variable light domain, viral protein 1, ...
Authors:Liu, Y., Dong, Y., Rossmann, M.G.
Deposit date:2017-06-08
Release date:2017-07-12
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Antibody-induced uncoating of human rhinovirus B14.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1AHA
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THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:ALPHA-MOMORCHARIN, ADENINE
Authors:Ren, J., Wang, Y., Dong, Y., Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
1AHB
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THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:ALPHA-MOMORCHARIN, FORMYCIN-5'-MONOPHOSPHATE
Authors:Ren, J., Wang, Y., Dong, Y., Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
1AHC
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THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:ALPHA-MOMORCHARIN
Authors:Ren, J., Wang, Y., Dong, Y., Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
4LX3
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CONSERVED RESIDUES THAT MODULATE PROTEIN TRANS-SPLICING OF NPU DNAE SPLIT INTEIN
Descriptor:DNA polymerase III, alpha subunit, Nucleic acid binding, ...
Authors:Wu, Q., Gao, Z., Wei, Y., Ma, G., Zheng, Y., Dong, Y., Liu, Y.
Deposit date:2013-07-29
Release date:2014-06-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved Residues that Modulate Protein trans-Splicing of Npu DnaE Split Intein
Biochem.J., 2014
4ZWJ
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CRYSTAL STRUCTURE OF RHODOPSIN BOUND TO ARRESTIN BY FEMTOSECOND X-RAY LASER
Descriptor:Chimera protein of human Rhodopsin, mouse S-arrestin, and T4 Endolysin
Authors:Kang, Y., Zhou, X.E., Gao, X., He, Y., Liu, W., Ishchenko, A., Barty, A., White, T.A., Yefanov, O., Han, G.W., Xu, Q., de Waal, P.W., Ke, J., Tan, M.H.E., Zhang, C., Moeller, A., West, G.M., Pascal, B., Eps, N.V., Caro, L.N., Vishnivetskiy, S.A., Lee, R.J., Suino-Powell, K.M., Gu, X., Pal, K., Ma, J., Zhi, X., Boutet, S., Williams, G.J., Messerschmidt, M., Gati, C., Zatsepin, N.A., Wang, D., James, D., Basu, S., Roy-Chowdhury, S., Conrad, C., Coe, J., Liu, H., Lisova, S., Kupitz, C., Grotjohann, I., Fromme, R., Jiang, Y., Tan, M., Yang, H., Li, J., Wang, M., Zheng, Z., Li, D., Howe, N., Zhao, Y., Standfuss, J., Diederichs, K., Dong, Y., Potter, C.S., Carragher, B., Caffrey, M., Jiang, H., Chapman, H.N., Spence, J.C.H., Fromme, P., Weierstall, U., Ernst, O.P., Katritch, V., Gurevich, V.V., Griffin, P.R., Hubbell, W.L., Stevens, R.C., Cherezov, V., Melcher, K., Xu, H.E., GPCR Network (GPCR)
Deposit date:2015-05-19
Release date:2015-07-29
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser.
Nature, 523, 2015
1REO
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L-AMINO ACID OXIDASE FROM AGKISTRODON HALYS PALLAS
Descriptor:AHPLAAO, N-ACETYL-D-GLUCOSAMINE, 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE, ...
Authors:Zhang, H., Teng, M., Niu, L., Wang, Y., Wang, Y., Liu, Q., Huang, Q., Hao, Q., Dong, Y., Liu, P.
Deposit date:2003-11-07
Release date:2004-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Purification, partial characterization, crystallization and structural determination of AHP-LAAO, a novel L-amino-acid oxidase with cell apoptosis-inducing activity from Agkistrodon halys pallas venom.
Acta Crystallogr.,Sect.D, 60, 2004
4MZ7
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STRUCTURAL INSIGHT INTO DGTP-DEPENDENT ACTIVATION OF TETRAMERIC SAMHD1 DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ZINC ION, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhu, C., Gao, W., Zhao, K., Qin, X., Zhang, Y., Peng, X., Zhang, L., Dong, Y., Zhang, W., Li, P., Wei, W., Gong, Y., Yu, X.F.
Deposit date:2013-09-29
Release date:2013-11-20
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into dGTP-dependent activation of tetrameric SAMHD1 deoxynucleoside triphosphate triphosphohydrolase
Nat Commun, 4, 2013
5ID3
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SOLUTION STRUCTURE OF THE PORE-FORMING REGION OF C. ELEGANS MITOCHONDRIAL CALCIUM UNIPORTER (MCU)
Descriptor:Mitochondrial Calcium Uniporter
Authors:Oxenoid, K., Dong, Y., Cao, C., Cui, T., Sancak, Y., Markhard, A.L., Grabarek, Z., Kong, L., Liu, Z., Ouyang, B., Cong, Y., Mootha, V.K., Chou, J.J., Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2016-02-23
Release date:2016-05-04
Last modified:2017-09-27
Method:SOLUTION NMR
Cite:Architecture of the mitochondrial calcium uniporter.
Nature, 533, 2016
5VGZ
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CONFORMATIONAL LANDSCAPE OF THE P28-BOUND HUMAN PROTEASOME REGULATORY PARTICLE
Descriptor:26S proteasome regulatory subunit 7, 26S proteasome regulatory subunit 4, 26S proteasome regulatory subunit 8, ...
Authors:Lu, Y., Wu, J., Dong, Y., Chen, S., Sun, S., Ma, Y.B., Ouyang, Q., Finley, D., Kirschner, M.W., Mao, Y.
Deposit date:2017-04-12
Release date:2017-08-23
Last modified:2018-08-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
5VHF
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CONFORMATIONAL LANDSCAPE OF THE P28-BOUND HUMAN PROTEASOME REGULATORY PARTICLE
Descriptor:26S proteasome non-ATPase regulatory subunit 10, 26S proteasome regulatory subunit 7, 26S proteasome regulatory subunit 4, ...
Authors:Lu, Y., Wu, J., Dong, Y., Chen, S., Sun, S., Ma, Y.B., Ouyang, Q., Finley, D., Kirschner, M.W., Mao, Y.
Deposit date:2017-04-13
Release date:2017-08-23
Last modified:2018-08-22
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
5VHH
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CONFORMATIONAL LANDSCAPE OF THE P28-BOUND HUMAN PROTEASOME REGULATORY PARTICLE
Descriptor:26S proteasome regulatory subunit 7, 26S proteasome regulatory subunit 4, 26S proteasome regulatory subunit 8, ...
Authors:Lu, Y., Wu, J., Dong, Y., Chen, S., Sun, S., Ma, Y.B., Ouyang, Q., Finley, D., Kirschner, M.W., Mao, Y.
Deposit date:2017-04-13
Release date:2017-08-23
Last modified:2018-08-22
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
5VHI
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CONFORMATIONAL LANDSCAPE OF THE P28-BOUND HUMAN PROTEASOME REGULATORY PARTICLE
Descriptor:26S proteasome regulatory subunit 7, 26S proteasome regulatory subunit 4, 26S proteasome regulatory subunit 8, ...
Authors:Lu, Y., Wu, J., Dong, Y., Chen, S., Sun, S., Ma, Y.B., Ouyang, Q., Finley, D., Kirschner, M.W., Mao, Y.
Deposit date:2017-04-13
Release date:2017-08-23
Last modified:2018-08-22
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017