Author results

1U9C
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CRYSTALLOGRAPHIC STRUCTURE OF APC35852
Descriptor:APC35852
Authors:Borek, D., Chen, Y., Shao, D., Collart, F., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-08-09
Release date:2004-10-05
Last modified:2014-11-19
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural analysis of DJI superfamily
To be Published
1IHD
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CRYSTAL STRUCTURE OF TRIGONAL FORM OF D90E MUTANT OF ESCHERICHIA COLI ASPARAGINASE II
Descriptor:L-asparaginase II
Authors:Borek, D., Jaskolski, M.
Deposit date:2001-04-19
Release date:2003-09-09
Last modified:2016-10-19
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of active site mutant of antileukemic L-asparaginase reveals conserved zinc-binding site.
Febs J., 281, 2014
1JAZ
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CRYSTAL STRUCTURE OF MONOCLINIC FORM OF D90E MUTANT OF ESCHERICHIA COLI ASPARAGINASE II
Descriptor:L-ASPARAGINASE II, ZINC ION
Authors:Borek, D., Kozak, M., Jaskolski, M.
Deposit date:2001-06-01
Release date:2003-09-09
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal structure of active site mutant of antileukemic L-asparaginase reveals conserved zinc-binding site.
Febs J., 281, 2014
1JJA
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CRYSTAL STRUCTURE OF ORTHORHOMBIC FORM OF D90E MUTANT OF ESCHERICHIA COLI L-ASPARAGINASE II
Descriptor:L-ASPARAGINASE II
Authors:Borek, D., Kozak, M., Jaskolski, M.
Deposit date:2001-07-04
Release date:2003-09-09
Last modified:2016-10-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of active site mutant of antileukemic L-asparaginase reveals conserved zinc-binding site.
Febs J., 281, 2014
1SDI
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1.65 A STRUCTURE OF ESCHERICHIA COLI YCFC GENE PRODUCT
Descriptor:Hypothetical protein ycfC, ACETIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Borek, D., Otwinowski, Z., Chen, Y., Skarina, T., Savchenko, A., Edwards, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-02-13
Release date:2004-08-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural analysis of Escherichia coli ycfC gene product
To be Published
1T0B
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STRUCTURE OF THUA-LIKE PROTEIN FROM BACILLUS STEAROTHERMOPHILUS
Descriptor:ThuA-like protein, ZINC ION
Authors:Borek, D., Chen, Y., Collart, F., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-04-08
Release date:2004-08-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Analysis of chemical interactions in ThuA-like protein from Bacillus Stearothermophilus
To be Published
1WPB
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STRUCTURE OF ESCHERICHIA COLI YFBU GENE PRODUCT
Descriptor:hypothetical protein yfbU, CHLORIDE ION, GLYCEROL
Authors:Borek, D., Chen, Y., Zheng, M., Skarina, T., Savchenko, A., Edwards, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-09-01
Release date:2004-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Escherichia coli yfbU gene product
To be Published
4KT7
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THE CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOLSYNTHASE FROM ANAEROCOCCUS PREVOTII DSM 20548
Descriptor:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, CHLORIDE ION, SODIUM ION
Authors:Borek, D., Tan, K., Stols, L., Eschenfeidt, W.H., Otwinoski, Z., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-20
Release date:2013-06-05
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:The crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase from Anaerococcus prevotii DSM 20548
To be Published
5DLL
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AMINOPEPTIDASE N (PEPN) FROM FRANCISELLA TULARENSIS SUBSP. TULARENSIS SCHU S4
Descriptor:Aminopeptidase N, ZINC ION, CHLORIDE ION, ...
Authors:Borek, D., Raczynska, J., Dubrovska, I., Grimshaw, S., Minasov, G., Shuvalova, L., Kwon, K., Anderson, W.F., Otwinowski, Z., Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-09-07
Release date:2015-09-16
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Aminopeptidase N (pepN) from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
5V01
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CRYSTAL STRUCTURE OF THE COMPETENCE DAMAGE-INDUCIBLE PROTEIN A (COMA) FROM KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE MGH 78578
Descriptor:Competence damage-inducible protein A, CHLORIDE ION, SODIUM ION, ...
Authors:Borek, D., Wawrzak, Z., Grimshaw, S., Sandoval, J., Evdokimova, E., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-28
Release date:2017-03-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the competence damage-inducible protein A (ComA) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
To Be Published
5V10
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CRYSTAL STRUCTURE OF THE PUTATIVE TOL-PAL SYSTEM-ASSOCIATED ACYL-COA THIOESTERASE FROM PSEUDOMONAS AERUGINOSA PAO1
Descriptor:Uncharacterized protein, CHLORIDE ION
Authors:Borek, D., Wawrzak, Z., Grimshaw, S., Sandoval, J., Evdokimova, E., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-28
Release date:2017-03-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the putative tol-pal system-associated acyl-CoA thioesterase from Pseudomonas aeruginosa PAO1
To Be Published
5VR0
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CRYSTAL STRUCTURE OF GLUCOSE ISOMERASE FROM STREPTOMYCES RUBIGINOSUS
Descriptor:Xylose isomerase, (4R)-2-METHYLPENTANE-2,4-DIOL, MANGANESE (II) ION, ...
Authors:Borek, D., Otwinowski, Z.
Deposit date:2017-05-09
Release date:2018-05-02
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Real-space analysis of radiation-induced specific changes with independent component analysis.
J Synchrotron Radiat, 25, 2018
1JN9
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STRUCTURE OF PUTATIVE ASPARAGINASE ENCODED BY ESCHERICHIA COLI YBIK GENE
Descriptor:PUTATIVE L-ASPARAGINASE, SODIUM ION, CHLORIDE ION, ...
Authors:Borek, D., Jaskolski, M.
Deposit date:2001-07-23
Release date:2003-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal packing of plant-type L-asparaginase from Escherichia coli.
Acta Crystallogr.,Sect.D, 64, 2008
1K2X
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CRYSTAL STRUCTURE OF PUTATIVE ASPARAGINASE ENCODED BY ESCHERICHIA COLI YBIK GENE
Descriptor:Putative L-asparaginase, SODIUM ION, CHLORIDE ION
Authors:Borek, D., Jaskolski, M.
Deposit date:2001-09-30
Release date:2003-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal packing of plant-type L-asparaginase from Escherichia coli.
Acta Crystallogr.,Sect.D, 64, 2008
5VGC
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CRYSTAL STRUCTURE OF THE NLEG5-1 EFFECTOR (C200A) FROM ESCHERICHIA COLI O157:H7 STR. SAKAI
Descriptor:NleG5-1 effector, CALCIUM ION, CHLORIDE ION, ...
Authors:Borek, D., Valleau, D., Skarina, T., Jobin, M.C., Wawrzak, Z., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-04-10
Release date:2018-04-18
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the NleG5-1 effector (C200A) from Escherichia coli O157:H7 str. Sakai
To Be Published
1R61
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THE STRUCTURE OF PREDICTED METAL-DEPENDENT HYDROLASE FROM BACILLUS STEAROTHERMOPHILUS
Descriptor:metal-dependent hydrolase, ZINC ION, SULFATE ION
Authors:Maderova, J., Borek, D., Tomchick, D., Joachimiak, A., Collart, F., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-10-14
Release date:2004-03-30
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of potential metal-dependent hydrolase with cyclase activity
To be Published
3KRV
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THE STRUCTURE OF POTENTIAL METAL-DEPENDENT HYDROLASE WITH CYCLASE ACTIVITY
Descriptor:Hydrolase, CHLORIDE ION, SULFATE ION, ...
Authors:Rakonjac, N., Rezacova, P., Borek, D., Collart, F., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-11-19
Release date:2010-01-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The Structure Of Potential Metal-Dependent Hydrolase With Cyclase Activity
To be Published
1T0T
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CRYSTALLOGRAPHIC STRUCTURE OF A PUTATIVE CHLORITE DISMUTASE
Descriptor:APC35880, MAGNESIUM ION, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
Authors:Gilski, M., Borek, D., Chen, Y., Collart, F., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-04-12
Release date:2004-08-24
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of APC35880 protein from Bacillus Stearothermophilus
To be Published
1YSP
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF E. COLI TRANSCRIPTIONAL REGULATOR KDGR.
Descriptor:Transcriptional regulator kdgR, SULFATE ION
Authors:Bochkarev, A., Lunin, V.V., Ezersky, A., Evdokimova, E., Skarina, T., Xu, X., Borek, D., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-02-08
Release date:2005-03-22
Last modified:2011-10-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study of effector binding specificity in IclR transcriptional regulators
To be Published
1YSQ
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THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR YAIJ
Descriptor:HTH-type transcriptional regulator yiaJ, PHOSPHATE ION
Authors:Bochkarev, A., Lunin, V.V., Ezersky, A., Evdokimova, E., Skarina, T., Xu, X., Borek, D., Edwards, A.M., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-02-08
Release date:2005-03-22
Last modified:2011-10-05
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural study of effector binding specificity in IclR transcriptional regulators
To be Published
2FCJ
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STRUCTURE OF SMALL TOPRIM DOMAIN PROTEIN FROM BACILLUS STEAROTHERMOPHILUS.
Descriptor:small TOPRIM domain protein, GLYCEROL, SULFATE ION, ...
Authors:Rezacova, P., Chen, Y., Borek, D., Collart, F., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-12
Release date:2006-01-24
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus.
Proteins, 70, 2008
2I5R
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STRUCTURE OF SMALL TOPRIM DOMAIN-CONTAINING PROTEIN FROM B. STEAROTHERMOPHILUS IN COMPLEX WITH MG2+
Descriptor:Toprim domain-containing protein, MAGNESIUM ION, GLYCEROL, ...
Authors:Rezacova, P., Borek, D., Otwinowski, Z., Joachimiak, A., Moy, S.F., Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-25
Release date:2007-07-03
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus.
Proteins, 70, 2007
2IW5
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STRUCTURAL BASIS FOR COREST-DEPENDENT DEMETHYLATION OF NUCLEOSOMES BY THE HUMAN LSD1 HISTONE DEMETHYLASE
Descriptor:LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, REST COREPRESSOR 1, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Yang, M., Gocke, C.B., Luo, X., Borek, D., Tomchick, D.R., Machius, M., Otwinowski, Z., Yu, H.
Deposit date:2006-06-26
Release date:2006-08-09
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural Basis for Corest-Dependent Demethylation of Nucleosomes by the Human Lsd1 Histone Demethylase
Mol.Cell, 23, 2006
2OGG
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STRUCTURE OF B. SUBTILIS TREHALOSE REPRESSOR (TRER) EFFECTOR BINDING DOMAIN
Descriptor:Trehalose operon transcriptional repressor, SODIUM ION, SULFATE ION, ...
Authors:Rezacova, P., Krejcirikova, V., Borek, D., Moy, S.F., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-01-05
Release date:2007-02-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the effector-binding domain of the trehalose repressor TreR from Bacillus subtilis 168 reveals a unique quarternary assembly.
Proteins, 69, 2007
3FWK
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CRYSTAL STRUCTURE OF CANDIDA GLABRATA FMN ADENYLYLTRANSFERASE
Descriptor:FMN Adenylyltransferase, CHLORIDE ION, BETA-D-GLUCOSE
Authors:Huerta, C., Borek, D., Zhang, H.
Deposit date:2009-01-18
Release date:2009-05-26
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure and mechanism of a eukaryotic FMN adenylyltransferase.
J.Mol.Biol., 389, 2009
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