Author results

1I3X
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SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA
Descriptor:5'-R(*GP*GP*CP*UP*GP*GP*CP*UP*GP*UP*UP*CP*GP*CP*CP*AP*GP*CP*C)-3'
Authors:Blanchard, S.C., Puglisi, J.D.
Deposit date:2001-02-17
Release date:2001-04-04
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the A loop of 23S ribosomal RNA.
Proc.Natl.Acad.Sci.USA, 98, 2001
1I3Y
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SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA.
Descriptor:5'-R(*GP*GP*CP*UP*GP*GP*CP*(OMU)P*GP*UP*UP*CP*GP*CP*CP*AP*GP*CP*C)-3'
Authors:Puglisi, J.D., Blanchard, S.C.
Deposit date:2001-02-17
Release date:2001-04-04
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the A loop of 23S ribosomal RNA.
Proc.Natl.Acad.Sci.USA, 98, 2001
4V9C
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ALLOSTERIC CONTROL OF THE RIBOSOME BY SMALL-MOLECULE ANTIBIOTICS
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Cate, J.H.D., Pulk, A., Blanchard, S.C., Wang, L., Feldman, M.B., Wasserman, M.R., Altman, R.
Deposit date:2012-07-25
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Allosteric control of the ribosome by small-molecule antibiotics.
Nat.Struct.Mol.Biol., 19, 2012
4V9D
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STRUCTURES OF THE BACTERIAL RIBOSOME IN CLASSICAL AND HYBRID STATES OF TRNA BINDING
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Dunkle, J.A., Wang, L., Feldman, M.B., Pulk, A., Chen, V.B., Kapral, G.J., Noeske, J., Richardson, J.S., Blanchard, S.C., Cate, J.H.D.
Deposit date:2012-07-31
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of the bacterial ribosome in classical and hybrid states of tRNA binding.
Science, 332, 2011
4WF1
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CRYSTAL STRUCTURE OF THE E. COLI RIBOSOME BOUND TO NEGAMYCIN.
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Olivier, N.B., Altman, R.B., Noeske, J., Basarab, G.S., Code, E., Ferguson, A.D., Gao, N., Huang, J., Juette, M.F., Livchak, S., Miller, M.D., Prince, D.B., Cate, J.H.D., Buurman, E.T., Blanchard, S.C.
Deposit date:2014-09-11
Release date:2014-11-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Negamycin induces translational stalling and miscoding by binding to the small subunit head domain of the Escherichia coli ribosome.
Proc.Natl.Acad.Sci.USA, 111, 2014
4YBB
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HIGH-RESOLUTION STRUCTURE OF THE ESCHERICHIA COLI RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Noeske, J., Wasserman, M.R., Terry, D.S., Altman, R.B., Blanchard, S.C., Cate, J.H.D.
Deposit date:2015-02-18
Release date:2015-03-18
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution structure of the Escherichia coli ribosome.
Nat.Struct.Mol.Biol., 22, 2015
4Z3S
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH ANTIBIOTIC A201A, MRNA AND THREE TRNAS IN THE A, P AND E SITES AT 2.65A RESOLUTION
Descriptor:23S Ribosomal RNA, 5S Ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Polikanov, Y.S., Starosta, A.L., Juette, M.F., Altman, R.B., Terry, D.S., Lu, W., Burnett, B.J., Dinos, G., Reynolds, K., Blanchard, S.C., Steitz, T.A., Wilson, D.N.
Deposit date:2015-03-31
Release date:2015-06-03
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
5DOX
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH HYGROMYCIN-A AT 3.1A RESOLUTION
Descriptor:23S Ribosomal RNA, 5S Ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Polikanov, Y.S., Starosta, A.L., Juette, M.F., Altman, R.B., Terry, D.S., Lu, W., Burnett, B.J., Dinos, G., Reynolds, K., Blanchard, S.C., Steitz, T.A., Wilson, D.N.
Deposit date:2015-09-11
Release date:2015-12-30
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
5DOY
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH ANTIBIOTIC HYGROMYCIN A, MRNA AND THREE TRNAS IN THE A, P AND E SITES AT 2.6A RESOLUTION
Descriptor:23S Ribosomal RNA, 5S Ribosomal RNA, 50S Ribosomal Protein L2, ...
Authors:Polikanov, Y.S., Starosta, A.L., Juette, M.F., Altman, R.B., Terry, D.S., Lu, W., Burnett, B.J., Dinos, G., Reynolds, K., Blanchard, S.C., Steitz, T.A., Wilson, D.N.
Deposit date:2015-09-11
Release date:2015-12-30
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
5KCR
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CRYO-EM STRUCTURE OF THE ESCHERICHIA COLI 70S RIBOSOME IN COMPLEX WITH ANTIBIOTIC AVILAMYCIN C, MRNA AND P-SITE TRNA AT 3.6A RESOLUTION
Descriptor:23S Ribosomal RNA, 5S Ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Arenz, S., Juette, M.F., Graf, M., Nguyen, F., Huter, P., Polikanov, Y.S., Blanchard, S.C., Wilson, D.N.
Deposit date:2016-06-06
Release date:2016-08-17
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of the orthosomycin antibiotics avilamycin and evernimicin in complex with the bacterial 70S ribosome.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KCS
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CRYO-EM STRUCTURE OF THE ESCHERICHIA COLI 70S RIBOSOME IN COMPLEX WITH ANTIBIOTIC EVERNIMYCIN, MRNA, TETM AND P-SITE TRNA AT 3.9A RESOLUTION
Descriptor:23S Ribosomal RNA, 5S Ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Arenz, S., Juette, M.F., Graf, M., Nguyen, F., Huter, P., Polikanov, Y.S., Blanchard, S.C., Wilson, D.N.
Deposit date:2016-06-06
Release date:2016-08-17
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of the orthosomycin antibiotics avilamycin and evernimicin in complex with the bacterial 70S ribosome.
Proc.Natl.Acad.Sci.USA, 113, 2016
6GZ3
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TRNA TRANSLOCATION BY THE EUKARYOTIC 80S RIBOSOME AND THE IMPACT OF GTP HYDROLYSIS, TRANSLOCATION-INTERMEDIATE-POST-1 (TI-POST-1)
Descriptor:28S ribosomal RNA, ap/P-site tRNA, mRNA, ...
Authors:Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
Deposit date:2018-07-03
Release date:2018-12-05
Last modified:2018-12-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
Cell Rep, 25, 2018
6GZ4
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TRNA TRANSLOCATION BY THE EUKARYOTIC 80S RIBOSOME AND THE IMPACT OF GTP HYDROLYSIS, TRANSLOCATION-INTERMEDIATE-POST-2 (TI-POST-2)
Descriptor:ribosomal protein uL2, ribosomal protein uS2, ribosomal protein uL3, ...
Authors:Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
Deposit date:2018-07-03
Release date:2018-12-05
Last modified:2018-12-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
Cell Rep, 25, 2018
6GZ5
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TRNA TRANSLOCATION BY THE EUKARYOTIC 80S RIBOSOME AND THE IMPACT OF GTP HYDROLYSIS, TRANSLOCATION-INTERMEDIATE-POST-3 (TI-POST-3)
Descriptor:28S ribosomal RNA, P/P-site-tRNA, mRNA, ...
Authors:Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
Deposit date:2018-07-03
Release date:2018-12-05
Last modified:2018-12-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
Cell Rep, 25, 2018
1PBR
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STRUCTURE OF 16S RIBOSOMAL RNA, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:16S RIBOSOMAL RNA, 2-amino-2-deoxy-alpha-D-glucopyranose, 2-DEOXYSTREPTAMINE, ...
Authors:Fourmy, D., Recht, M.I., Blanchard, S., Puglisi, J.D.
Deposit date:1996-09-12
Release date:1997-09-17
Last modified:2013-01-16
Method:SOLUTION NMR
Cite:Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic.
Science, 274, 1996
3J0L
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CORE OF MAMMALIAN 80S PRE-RIBOSOME IN COMPLEX WITH TRNAS FITTED TO A 9.8A CRYO-EM MAP: CLASSIC PRE STATE 1
Descriptor:40S ribosomal RNA fragment, Ribosomal protein S5, Ribosomal protein S14, ...
Authors:Budkevich, T., Giesebrecht, J., Altman, R., Munro, J., Mielke, T., Nierhaus, K., Blanchard, S., Spahn, C.M.
Deposit date:2011-10-04
Release date:2011-11-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:Structure and dynamics of the Mammalian ribosomal pretranslocation complex.
Mol.Cell, 44, 2011
3J0O
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CORE OF MAMMALIAN 80S PRE-RIBOSOME IN COMPLEX WITH TRNAS FITTED TO A 9A CRYO-EM MAP: CLASSIC PRE STATE 2
Descriptor:40S ribosomal RNA fragment, Ribosomal protein S5, Ribosomal protein S14, ...
Authors:Budkevich, T., Giesebrecht, J., Altman, R., Munro, J., Mielke, T., Nierhaus, K., Blanchard, S., Spahn, C.M.
Deposit date:2011-10-05
Release date:2011-11-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structure and dynamics of the Mammalian ribosomal pretranslocation complex.
Mol.Cell, 44, 2011
3J0P
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CORE OF MAMMALIAN 80S PRE-RIBOSOME IN COMPLEX WITH TRNAS FITTED TO A 10.6A CRYO-EM MAP: ROTATED PRE STATE 1
Descriptor:40S ribosomal RNA fragment, Ribosomal protein S15, Ribosomal protein S23, ...
Authors:Budkevich, T., Giesebrecht, J., Altman, R., Munro, J., Mielke, T., Nierhaus, K., Blanchard, S., Spahn, C.M.
Deposit date:2011-10-06
Release date:2011-11-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structure and dynamics of the Mammalian ribosomal pretranslocation complex.
Mol.Cell, 44, 2011
3J0Q
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CORE OF MAMMALIAN 80S PRE-RIBOSOME IN COMPLEX WITH TRNAS FITTED TO A 10.6A CRYO-EM MAP: ROTATED PRE STATE 2
Descriptor:40S ribosomal RNA fragment, Ribosomal protein S15, Ribosomal protein S23, ...
Authors:Budkevich, T., Giesebrecht, J., Altman, R., Munro, J., Mielke, T., Nierhaus, K., Blanchard, S., Spahn, C.M.
Deposit date:2011-10-11
Release date:2011-11-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structure and dynamics of the Mammalian ribosomal pretranslocation complex.
Mol.Cell, 44, 2011
4JI0
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CRYSTAL STRUCTURE OF 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Descriptor:16S rRNA, ribosomal protein S2, ribosomal protein S3, ...
Authors:Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.492 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI1
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CRYSTAL STRUCTURE OF 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Descriptor:16S rRNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.144 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI2
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CRYSTAL STRUCTURE OF 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Descriptor:16S rRNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI3
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CRYSTAL STRUCTURE OF 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Descriptor:16S rRNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Demirci, H., Wang, L., Murphy, F.V., Murphy, E.L., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2014-10-15
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI4
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CRYSTAL STRUCTURE OF 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Descriptor:16S rRNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.692 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI5
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CRYSTAL STRUCTURE OF 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Descriptor:16S rRNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
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