Author results

2AXQ
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APO HISTIDINE-TAGGED SACCHAROPINE DEHYDROGENASE (L-GLU FORMING) FROM SACCHAROMYCES CEREVISIAE
Descriptor:Saccharopine dehydrogenase, SULFATE ION
Authors:Andi, B., Cook, P.F., West, A.H.
Deposit date:2005-09-05
Release date:2006-08-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the his-tagged saccharopine reductase from Saccharomyces cerevisiae at 1.7-A resolution.
Cell Biochem.Biophys., 46, 2006
2QRJ
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CRYSTAL STRUCTURE OF SULFATE-BOUND SACCHAROPINE DEHYDROGENASE (L-LYS FORMING) FROM SACCHAROMYCES CEREVISIAE
Descriptor:Saccharopine dehydrogenase, NAD+, L-lysine-forming, ...
Authors:Andi, B., Xu, H., Cook, P.F., West, A.H.
Deposit date:2007-07-28
Release date:2007-10-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of Ligand-Bound Saccharopine Dehydrogenase from Saccharomyces cerevisiae
Biochemistry, 46, 2007
2QRK
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CRYSTAL STRUCTURE OF AMP-BOUND SACCHAROPINE DEHYDROGENASE (L-LYS FORMING) FROM SACCHAROMYCES CEREVISIAE
Descriptor:Saccharopine dehydrogenase [NAD+, L-lysine-forming, ADENOSINE MONOPHOSPHATE
Authors:Andi, B., Xu, H., Cook, P.F., West, A.H.
Deposit date:2007-07-28
Release date:2007-10-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structures of Ligand-Bound Saccharopine Dehydrogenase from Saccharomyces cerevisiae
Biochemistry, 46, 2007
2QRL
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CRYSTAL STRUCTURE OF OXALYLGLYCINE-BOUND SACCHAROPINE DEHYDROGENASE (L-LYS FORMING) FROM SACCHAROMYCES CEREVISIAE
Descriptor:Saccharopine dehydrogenase, NAD+, L-lysine-forming, ...
Authors:Andi, B., Xu, H., Cook, P.F., West, A.H.
Deposit date:2007-07-28
Release date:2007-10-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of Ligand-Bound Saccharopine Dehydrogenase from Saccharomyces cerevisiae
Biochemistry, 46, 2007
6PBR
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CATALYTIC DOMAIN OF E.COLI DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE IN I4 SPACE GROUP
Descriptor:Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, SODIUM ION
Authors:Andi, B., Soares, A., Shi, W., McSweeney, S., Liu, Q.
Deposit date:2019-06-14
Release date:2019-06-26
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the dihydrolipoamide succinyltransferase catalytic domain from Escherichia coli in a novel crystal form: a tale of a common protein crystallization contaminant
To Be Published
5F81
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ACOUSTIC INJECTORS FOR DROP-ON-DEMAND SERIAL FEMTOSECOND CRYSTALLOGRAPHY
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Roessler, C.G., Agarwal, R., Allaire, M., Alonso-Mori, R., Andi, B., Bachega, J.F.R., Bommer, M., Brewster, A.S., Browne, M.C., Chatterjee, R., Cho, E., Cohen, A.E., Cowan, M., Datwani, S., Davidson, V.L., Defever, J., Eaton, B., Ellson, R., Feng, Y., Ghislain, L.P., Glownia, J.M., Han, G., Hattne, J., Hellmich, J., Heroux, A., Ibrahim, M., Kern, J., Kuczewski, A., Lemke, H.T., Liu, P., Majlof, L., McClintock, W.M., Myers, S., Nelsen, S., Olechno, J., Orville, A.M., Sauter, N.K., Soares, A.S., Soltis, M.S., Song, H., Stearns, R.G., Tran, R., Tsai, Y., Uervirojnangkoorn, M., Wilmot, C.M., Yachandra, V., Yano, J., Yukl, E.T., Zhu, D., Zouni, A.
Deposit date:2015-12-08
Release date:2016-02-10
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Acoustic Injectors for Drop-On-Demand Serial Femtosecond Crystallography.
Structure, 24, 2016
5HL4
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ACOUSTIC INJECTORS FOR DROP-ON-DEMAND SERIAL FEMTOSECOND CRYSTALLOGRAPHY
Descriptor:Ring-hydroxylating dioxygenase, FE2/S2 (INORGANIC) CLUSTER, FE (III) ION, ...
Authors:Roessler, C.G., Agarwal, R., Allaire, M., Alonso-Mori, R., Andi, B., Bachega, J.F.R., Bommer, M., Brewster, A.S., Browne, M.C., Chatterjee, R., Cho, E., Cohen, A.E., Cowan, M., Datwani, S., Davidson, V.L., Defever, J., Eaton, B., Ellson, R., Feng, Y., Ghislain, L.P., Glownia, J.M., Han, G., Hattne, J., Hellmich, J., Heroux, A., Ibrahim, M., Kern, J., Kuczewski, A., Lemke, H.T., Liu, P., Majlof, L., McClintock, W.M., Myers, S., Nelsen, S., Olechno, J., Orville, A.M., Sauter, N.K., Soares, A.S., Soltis, M.S., Song, H., Stearns, R.G., Tran, R., Tsai, Y., Uervirojnangkoorn, M., Wilmot, C.M., Yachandra, V., Yano, J., Yukl, E.T., Zhu, D., Zouni, A.
Deposit date:2016-01-14
Release date:2016-01-27
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Acoustic Injectors for Drop-On-Demand Serial Femtosecond Crystallography.
Structure, 24, 2016
5HQD
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ACOUSTIC INJECTORS FOR DROP-ON-DEMAND SERIAL FEMTOSECOND CRYSTALLOGRAPHY
Descriptor:Thermolysin, CALCIUM ION, ZINC ION
Authors:Roesser, C.G., Agarwal, R., Allaire, M., Alonso-Mori, R., Andi, B., Bachega, J.F.R., Bommer, M., Brewster, A.S., Browne, M.C., Chatterjee, R., Cho, E., Cohen, A.E., Cowan, M., Datwani, S., Davidson, V.L., Defever, J., Eaton, B., Ellson, R., Feng, Y., Ghislain, L.P., Glownia, J.M., Han, G., Hattne, J., Hellmich, J., Heroux, A., Ibrahim, M., Kern, J., Kuczewski, A., Lemke, H.T., Liu, P., Majlof, L., McClintock, W.M., Myers, S., Nelsen, S., Olechno, J., Orville, A.M., Sauter, N.K., Soares, A.S., Soltis, M.S., Song, H., Stearns, R.G., Tran, R., Tsai, Y., Uervirojnangkoorn, M., Wilmot, C.M., Yachandra, V., Yano, J., Yukl, E.T., Zhu, D., Zouni, A.
Deposit date:2016-01-21
Release date:2016-02-10
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Acoustic Injectors for Drop-On-Demand Serial Femtosecond Crystallography.
Structure, 24, 2016
3UH1
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CRYSTAL STRUCTURE OF SACCHAROPINE DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAE WITH BOUND SACCHAROPINE AND NADH
Descriptor:Saccharopine dehydrogenase [NAD+, L-lysine-forming], 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Kumar, V.P., Thomas, L.M., Bobyk, K.D., Andi, B., West, A.H., Cook, P.F.
Deposit date:2011-11-03
Release date:2012-02-01
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Evidence in Support of Lysine 77 and Histidine 96 as Acid-Base Catalytic Residues in Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
4QUP
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CRYSTAL STRUCTURE OF STACHYDRINE DEMETHYLASE WITH N-METHYL PROLINE FROM LOW X-RAY DOSE COMPOSITE DATASETS
Descriptor:Monoxygenase; demethylase, FE2/S2 (INORGANIC) CLUSTER, FE (III) ION, ...
Authors:Agarwal, R., Andi, B., Gizzi, A., Bonanno, J.B., Almo, S.C., Orville, A.M.
Deposit date:2014-07-11
Release date:2015-07-15
Last modified:2016-03-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tracking photoelectron induced in-crystallo enzyme catalysis
To be Published
4QUQ
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CRYSTAL STRUCTURE OF STACHYDRINE DEMETHYLASE IN COMPLEX WITH AZIDE
Descriptor:Monoxygenase; demethylase, FE2/S2 (INORGANIC) CLUSTER, FE (III) ION, ...
Authors:Agarwal, R., Andi, B., Gizzi, A., Bonanno, J.B., Almo, S.C., Orville, A.M.
Deposit date:2014-07-11
Release date:2015-07-15
Last modified:2016-03-09
Method:X-RAY DIFFRACTION (2.266 Å)
Cite:Tracking photoelectron induced in-crystallo enzyme catalysis
To be Published
4QUR
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CRYSTAL STRUCTURE OF STACHYDRINE DEMETHYLASE IN COMPLEX WITH CYANIDE, OXYGEN, AND N-METHYL PROLINE IN A NEW ORIENTATION
Descriptor:monoxygenase; demethylase, FE2/S2 (INORGANIC) CLUSTER, FE (III) ION, ...
Authors:Agarwal, R., Andi, B., Gizzi, A., Bonanno, J.B., Almo, S.C., Orville, A.M.
Deposit date:2014-07-11
Release date:2015-07-15
Last modified:2016-03-09
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Tracking photoelectron induced in-crystallo enzyme catalysis
To be Published
4U8U
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THE CRYSTALLOGRAPHIC STRUCTURE OF THE GIANT HEMOGLOBIN FROM GLOSSOSCOLEX PAULISTUS AT 3.2 A RESOLUTION.
Descriptor:Globin a chain, Globin b Chain, Globin c Chain, ...
Authors:Bachega, J.F.R., Maluf, F.V., Andi, B., D'Muniz Pereira, H., Carazzollea, M.F., Orville, A., Tabak, M., Garratt, R.C., Horjales, E.
Deposit date:2014-08-04
Release date:2015-06-10
Last modified:2016-09-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structure of the giant haemoglobin from Glossoscolex paulistus.
Acta Crystallogr.,Sect.D, 71, 2015
5MG1
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STRUCTURE OF THE PHOTOSENSORY MODULE OF DEINOCOCCUS PHYTOCHROME BY SERIAL FEMTOSECOND X-RAY CRYSTALLOGRAPHY
Descriptor:Bacteriophytochrome, 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid
Authors:Burgie, E.S., Fuller, F.D., Gul, S., Young, I.D., Brewster, A.S., Clinger, J., Andi, B., Stan, C., Allaire, M., Nelsen, S., Alonso-Mori, R., Phillips Jr., G.N., Sauter, N.K., Kern, J., Yachandra, V.K., Yano, J., Vierstra, R.D., Orville, A.M.
Deposit date:2016-11-20
Release date:2017-02-22
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers.
Nat. Methods, 14, 2017
5TIS
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ROOM TEMPERATURE XFEL STRUCTURE OF THE NATIVE, DOUBLY-ILLUMINATED PHOTOSYSTEM II COMPLEX
Descriptor:Photosystem II protein D1 1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Young, I.D., Ibrahim, M., Chatterjee, R., Gul, S., Fuller, F., Koroidov, S., Brewster, A.S., Tran, R., Alonso-Mori, R., Kroll, T., Michels-Clark, T., Laksmono, H., Sierra, R.G., Stan, C.A., Hussein, R., Zhang, M., Douthit, L., Kubin, M., de Lichtenberg, C., Pham, L.V., Nilsson, H., Cheah, M.H., Shevela, D., Saracini, C., Bean, M.A., Seuffert, I., Sokaras, D., Weng, T.-C., Pastor, E., Weninger, C., Fransson, T., Lassalle, L., Braeuer, P., Aller, P., Docker, P.T., Andi, B., Orville, A.M., Glownia, J.M., Nelson, S., Sikorski, M., Zhu, D., Hunter, M.S., Aquila, A., Koglin, J.E., Robinson, J., Liang, M., Boutet, S., Lyubimov, A.Y., Uervirojnangkoorn, M., Moriarty, N.W., Liebschner, D., Afonine, P.V., Watermann, D.G., Evans, G., Wernet, P., Dobbek, H., Weis, W.I., Brunger, A.T., Zwart, P.H., Adams, P.D., Zouni, A., Messinger, J., Bergmann, U., Sauter, N.K., Kern, J., Yachandra, V.K., Yano, J.
Deposit date:2016-10-03
Release date:2016-11-23
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.250004 Å)
Cite:Structure of photosystem II and substrate binding at room temperature.
Nature, 540, 2016
6O8A
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THAUMATIN NATIVE-SAD STRUCTURE DETERMINED AT 5 KEV FROM MICROCRYSTALS
Descriptor:Thaumatin-1, L(+)-TARTARIC ACID
Authors:Guo, G., Zhu, P., Fuchs, M.R., Shi, W., Andi, B., Gao, Y., Hendrickson, W.A., McSweeney, S., Liu, Q.
Deposit date:2019-03-09
Release date:2019-05-08
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Synchrotron microcrystal native-SAD phasing at a low energy.
Iucrj, 6, 2019
3UGK
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CRYSTAL STRUCTURE OF C205S MUTANT AND SACCHAROPINE DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAE.
Descriptor:Saccharopine dehydrogenase [NAD+, L-lysine-forming]
Authors:Cook, P.F., Kumar, V.P., Thomas, L.M., West, A.H., Bobyk, K.D.
Deposit date:2011-11-02
Release date:2012-02-01
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Evidence in Support of Lysine 77 and Histidine 96 as Acid-Base Catalytic Residues in Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
3UHA
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CRYSTAL STRUCTURE OF SACCHAROPINE DEHYDROGENASE FROM SACCHAROMYCES CERVISIAE COMPLEXED WITH NAD.
Descriptor:Saccharopine dehydrogenase [NAD+, L-lysine-forming], NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Cook, P.F., Kumar, V.P., Thomas, L.M., West, A.H., Bobyk, K.D.
Deposit date:2011-11-03
Release date:2012-02-01
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evidence in Support of Lysine 77 and Histidine 96 as Acid-Base Catalytic Residues in Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
4I1W
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2.00 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF NAD- BOUND 2-AMINOMUCONATE 6-SEMIALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS FLUORESCENS
Descriptor:2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, GLYCEROL
Authors:Huo, L., Davis, I., Chen, L., Liu, A.
Deposit date:2012-11-21
Release date:2014-05-21
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
4I25
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2.00 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF NAD- AND SUBSTRATE-BOUND 2-AMINOMUCONATE 6-SEMIALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS FLUORESCENS
Descriptor:2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Huo, L., Davis, I., Chen, L., Liu, A.
Deposit date:2012-11-21
Release date:2014-05-21
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
4I26
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2.20 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF 2-AMINOMUCONATE 6-SEMIALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS FLUORESCENS
Descriptor:2-aminomuconate 6-semialdehyde dehydrogenase, 1,2-ETHANEDIOL, SODIUM ION
Authors:Davis, I., Huo, L., Chen, L., Liu, A.
Deposit date:2012-11-21
Release date:2014-05-21
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
4I2R
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2.15 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF NAD- AND ALTERNATIVE SUBSTRATE-BOUND 2-AMINOMUCONATE 6-SEMIALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS FLUORESCENS
Descriptor:2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Huo, L., Davis, I., Chen, L., Liu, A.
Deposit date:2012-11-22
Release date:2014-05-21
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
4NPI
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1.94 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF NAD- AND INTERMEDIATE- BOUND ALPHA-AMINOMUCONATE-EPSILON-SEMIALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS FLUORESCENS
Descriptor:2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Huo, L., Davis, I., Liu, F., Iwaki, H., Hasegawa, Y., Liu, A.
Deposit date:2013-11-21
Release date:2014-12-24
Last modified:2015-01-21
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
4OE2
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2.00 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF E268A 2-AMINOMUCONATE 6-SEMIALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS FLUORESCENS
Descriptor:2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Huo, L., Davis, I., Liu, F., Esaki, S., Iwaki, H., Hasegawa, Y., Liu, A.
Deposit date:2014-01-11
Release date:2014-12-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
4OU2
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A 2.15 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF E268A 2-AMINOMUCONATE 6-SEMIALDEHYDE DEHYDROGENASE CATALYTIC INTERMEDIATE FROM PSEUDOMONAS FLUORESCENS
Descriptor:2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Huo, L., Liu, A.
Deposit date:2014-02-14
Release date:2014-12-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
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