Author results

1C48
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (G62T)
Descriptor:PROTEIN (SHIGA-LIKE TOXIN I B SUBUNIT)
Authors:Ling, H., Bast, D., Brunton, J.L., Read, R.J.
Deposit date:1999-08-11
Release date:2000-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
To be Published
1C4Q
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (F30A/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor:PROTEIN (SHIGA-LIKE TOXIN I SUBUNIT B), ALPHA D-GALACTOSE, BETA-D-GALACTOSE, ...
Authors:Ling, H., Brunton, J.L., Read, R.J.
Deposit date:1999-08-31
Release date:2000-09-20
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
To be Published
1N48
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Y-FAMILY DNA POLYMERASE DPO4 IN COMPLEX WITH DNA CONTAINING ABASIC LESION
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*CP*AP*(3DR)P*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
Deposit date:2002-10-30
Release date:2004-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Y-family polymerase complexed with abasic lesions: catching DNA with a loaded nucleoside triphosphate
To be Published
1N56
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Y-FAMILY DNA POLYMERASE DPO4 IN COMPLEX WITH DNA CONTAINING ABASIC LESION
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*AP*A)-3', 5'-D(*TP*CP*AP*TP*(3DR)P*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
Deposit date:2002-11-04
Release date:2004-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Y-family polymerase complexed with abasic lesions: catching DNA with a loaded nucleoside triphosphate
To be Published
2BOS
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A MUTANT SHIGA-LIKE TOXIN IIE BOUND TO ITS RECEPTOR
Descriptor:PROTEIN (SHIGA-LIKE TOXIN IIE B SUBUNIT), ALPHA D-GALACTOSE, BETA-D-GALACTOSE, ...
Authors:Ling, H., Boodhoo, A., Armstrong, G.D., Clark, C.G., Brunton, J.L., Read, R.J.
Deposit date:1998-10-20
Release date:1999-10-20
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A mutant Shiga-like toxin IIe bound to its receptor Gb(3): structure of a group II Shiga-like toxin with altered binding specificity.
Structure Fold.Des., 8, 2000
1S0M
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CRYSTAL STRUCTURE OF A BENZO[A]PYRENE DIOL EPOXIDE ADDUCT IN A TERNARY COMPLEX WITH A DNA POLYMERASE
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*T)-3', 5'-D(P*AP*TP*AP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*CP*A)-3', DNA polymerase IV, ...
Authors:Ling, H., Sayer, J.M., Boudsocq, F., Plosky, B.S., Woodgate, R., Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a benzo[a]pyrene diol epoxide adduct in a ternary complex with a DNA polymerase.
Proc.Natl.Acad.Sci.USA, 101, 2004
5X45
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CRYSTAL STRUCTURE OF 2A PROTEASE FROM HUMAN RHINOVIRUS C15
Descriptor:protease 2A, ZINC ION
Authors:Ling, H., Yang, P., Shaw, N., Sun, Y., Wang, X.
Deposit date:2017-02-10
Release date:2018-02-21
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structural view of the 2A protease from human rhinovirus C15
Acta Crystallogr.,Sect.F, 74, 2018
1BOS
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SHIGA-LIKE TOXIN COMPLEXED WITH ITS RECEPTOR
Descriptor:SHIGA-LIKE TOXIN I B SUBUNIT, ALPHA D-GALACTOSE, BETA-D-GALACTOSE, ...
Authors:Ling, H., Boodhoo, A., Hazes, B., Cummings, M.D., Armstrong, G.D., Brunton, J.L., Read, R.J.
Deposit date:1998-01-13
Release date:1999-02-02
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the shiga-like toxin I B-pentamer complexed with an analogue of its receptor Gb3.
Biochemistry, 37, 1998
1CQF
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THE COMPLEX OF THE MUTATED SHIGA TOXIN B SUBUNIT AND GB3 TRISACCHARIDE
Descriptor:SHIGA TOXIN B-CHAIN, ALPHA D-GALACTOSE, BETA-D-GALACTOSE, ...
Authors:Ling, H., Bast, D., Brunton, J.L., Read, R.J.
Deposit date:1999-08-06
Release date:2000-08-07
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Complex of the Mutated Shiga Toxin B Subunit and Gb3 Trisaccharide
To be Published
1CZG
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STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
Descriptor:SHIGA TOXIN B-CHAIN
Authors:Ling, H., Bast, D., Brunton, J.L., Read, R.J.
Deposit date:1999-09-03
Release date:2000-09-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
To be Published
1CZW
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STRUCTURE OF THE W34A MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
Descriptor:SHIGA TOXIN B-CHAIN
Authors:Ling, H., Boodhoo, A., Brunton, J.L., Read, R.J.
Deposit date:1999-09-07
Release date:2000-09-08
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A native structure of the W34A mutant at 2.5 A
To be Published
1D1I
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor:SHIGA TOXIN B-CHAIN, ALPHA D-GALACTOSE, BETA-D-GALACTOSE, ...
Authors:Ling, H., Boodhoo, A., Brunton, J.L., Read, R.J.
Deposit date:1999-09-17
Release date:2000-09-20
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mutated Shiga-like Toxin B Subunit (W34A) Complexed with Receptor Gb3 Analogue
To be Published
1D1K
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MUTATED SHIGA-LIKE TOXIN B SUBUNIT (D17E/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor:SHIGA-LIKE TOXIN I SUBUNIT B, ALPHA D-GALACTOSE, BETA-D-GALACTOSE, ...
Authors:Ling, H., Brunton, J.L., Read, R.J.
Deposit date:1999-09-17
Release date:2000-09-20
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutated Shiga-like toxin B subunit (D17E/W34A) complexed with receptor Gb3 analogue
To be Published
1JX4
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CRYSTAL STRUCTURE OF A Y-FAMILY DNA POLYMERASE IN A TERNARY COMPLEX WITH DNA SUBSTRATES AND AN INCOMING NUCLEOTIDE
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*T*TP*CP*AP*TP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV (family Y), ...
Authors:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
Deposit date:2001-09-05
Release date:2001-10-05
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
1JXL
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CRYSTAL STRUCTURE OF A Y-FAMILY DNA POLYMERASE IN A TERNARY COMPLEX WITH DNA SUBSTRATES AND AN INCOMING NUCLEOTIDE
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3', 5'-D(*T*TP*CP*GP*AP*AP*(BRU)P*CP*CP*TP*(BRU)P*CP*CP*CP*CP*C)-3', DNA polymerase IV (family Y), ...
Authors:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
Deposit date:2001-09-07
Release date:2001-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
1RYR
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REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', 5'-D(*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Boudsocq, F., Plosky, B., Woodgate, R., Yang, W.
Deposit date:2003-12-22
Release date:2004-02-10
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1RYS
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REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
Descriptor:5'-D(*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*A)-3', 5'-D(*TP*CP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Boudsocq, F., Plosky, B., Woodgate, R., Yang, W.
Deposit date:2003-12-22
Release date:2004-02-10
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1S0N
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SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION: STRUCTURAL BASIS FOR BASE SUBSTITUTION AND FRAMESHIFT
Descriptor:5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*CP*G)-3', 5'-D(*TP*AP*CP*GP*AP*CP*GP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0O
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SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION: STRUCTURAL BASIS FOR BASE SUBSTITUTION AND FRAMESHIFT
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S10
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SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION: STRUCTURAL BASIS FOR BASE SUBSTITUTION AND FRAMESHIFT
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
Deposit date:2004-01-05
Release date:2004-03-30
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
2AGO
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FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDE SELECTION AND PYROPHOSPHOROLYSIS
Descriptor:DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*G)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), DNA polymerase IV, ...
Authors:Ling, H., Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGP
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FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDE SELECTION AND PYROPHOSPHOROLYSIS
Descriptor:DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*(DOC)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), DNA polymerase IV, ...
Authors:Ling, H., Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGQ
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FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDE SELECTION AND PYROPHOSPHOROLYSIS
Descriptor:5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*(DOC))-3', 5'-D(*TP*CP*AP*TP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2IMW
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MECHANISM OF TEMPLATE-INDEPENDENT NUCLEOTIDE INCORPORATION CATALYZED BY A TEMPLATE-DEPENDENT DNA POLYMERASE
Descriptor:5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', 5'-D(*TP*AP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', DNA polymerase IV, ...
Authors:Ling, H., Yang, W.
Deposit date:2006-10-05
Release date:2007-01-16
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Mechanism of Template-independent Nucleotide Incorporation Catalyzed by a Template-dependent DNA Polymerase.
J.Mol.Biol., 365, 2007
3FDS
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STRUCTURAL INSIGHT INTO RECRUITMENT OF TRANSLESION DNA POLYMERASE DPO4 TO SLIDING CLAMP PCNA
Descriptor:DNA polymerase IV, DNA polymerase sliding clamp B, DNA polymerase sliding clamp C, ...
Authors:Ling, H.
Deposit date:2008-11-26
Release date:2009-01-20
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA
Mol.Microbiol., 71, 2009
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