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2P28
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BU of 2p28 by Molmil
Structure of the PHE2 and PHE3 fragments of the integrin beta2 subunit
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin beta-2
Authors:Shi, M, Foo, S.Y, Tan, S.M, Mitchell, E.P, Law, S.K.A, Lescar, J.
Deposit date:2007-03-07
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A structural hypothesis for the transition between bent and extended conformations of the leukocyte beta2 integrins
J.Biol.Chem., 282, 2007
2P26
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BU of 2p26 by Molmil
Structure of the PHE2 and PHE3 fragments of the integrin beta2 subunit
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin beta-2
Authors:Shi, M, Foo, S.Y, Tan, S.M, Mitchell, E.P, Law, S.K.A, Lescar, J.
Deposit date:2007-03-06
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A structural hypothesis for the transition between bent and extended conformations of the leukocyte beta2 integrins
J.Biol.Chem., 282, 2007
1HJR
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BU of 1hjr by Molmil
ATOMIC STRUCTURE OF THE RUVC RESOLVASE: A HOLLIDAY JUNCTION-SPECIFIC ENDONUCLEASE FROM E. COLI
Descriptor: HOLLIDAY JUNCTION RESOLVASE (RUVC)
Authors:Ariyoshi, M, Vassylyev, D.G, Morikawa, K.
Deposit date:1994-12-02
Release date:1995-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Atomic structure of the RuvC resolvase: a holliday junction-specific endonuclease from E. coli.
Cell(Cambridge,Mass.), 78, 1994
7W75
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BU of 7w75 by Molmil
Crystal structure of the K. lactis Bre1 RBD in complex with Rad6, crystal form I
Descriptor: E3 ubiquitin-protein ligase BRE1, Ubiquitin-conjugating enzyme E2 2
Authors:Shi, M, Zhao, J, Xiang, S.
Deposit date:2021-12-03
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the Rad6 activation by the Bre1 N-terminal domain.
Elife, 12, 2023
7W76
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BU of 7w76 by Molmil
Crystal structure of the K. lactis Bre1 RBD in complex with Rad6, crystal form II
Descriptor: E3 ubiquitin-protein ligase BRE1, GLYCEROL, SULFATE ION, ...
Authors:Shi, M, Zhao, J, Xiang, S.
Deposit date:2021-12-03
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural basis for the Rad6 activation by the Bre1 N-terminal domain.
Elife, 12, 2023
209D
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BU of 209d by Molmil
Structural, physical and biological characteristics of RNA:DNA binding agent N8-actinomycin D
Descriptor: DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3'), N8-ACTINOMYCIN D
Authors:Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F.
Deposit date:1995-05-01
Release date:1995-10-15
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural, Physical, and Biological Characteristics of RNA.DNA Binding Agent N8-Actinomycin D.
Biochemistry, 34, 1995
6PFX
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BU of 6pfx by Molmil
D-alanyl transferase DltD from Enterococcus faecium
Descriptor: D-alanyl transferase DltD, GLYCEROL
Authors:Shakhashiro, M, Korotkov, K.V.
Deposit date:2019-06-22
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:D-alanyl transferase DltD from Enterococcus faecium
To Be Published
5WX8
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BU of 5wx8 by Molmil
Human herpesvirus 6A immediate early protein 2 C-terminal domain
Descriptor: Immediate-early protein 2
Authors:Nishimura, M, Wang, J, Wakata, A, Sakamoto, K, Mori, Y.
Deposit date:2017-01-06
Release date:2017-08-02
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the DNA-Binding Domain of Human Herpesvirus 6A Immediate Early Protein 2.
J. Virol., 91, 2017
4WLC
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BU of 4wlc by Molmil
Structure of dextran glucosidase with glucose
Descriptor: CALCIUM ION, GLYCEROL, Glucan 1,6-alpha-glucosidase, ...
Authors:Kobayashi, M, Kato, K, Yao, M.
Deposit date:2014-10-07
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Structural insights into the catalytic reaction that is involved in the reorientation of Trp238 at the substrate-binding site in GH13 dextran glucosidase
Febs Lett., 589, 2015
4XB3
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BU of 4xb3 by Molmil
Structure of dextran glucosidase
Descriptor: CALCIUM ION, Glucan 1,6-alpha-glucosidase, HEXAETHYLENE GLYCOL
Authors:Kobayashi, M, Kato, K, Yao, M.
Deposit date:2014-12-16
Release date:2015-08-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Structural insights into the catalytic reaction that is involved in the reorientation of Trp238 at the substrate-binding site in GH13 dextran glucosidase
Febs Lett., 589, 2015
7OPQ
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BU of 7opq by Molmil
Rab27a fusion with Slp2a-RBDa1 effector covalent adduct with CA1 in C188
Descriptor: 1-[(2~{S})-2-(4-methoxyphenyl)pyrrolidin-1-yl]propan-1-one, GLYCEROL, MAGNESIUM ION, ...
Authors:Jamshidiha, M, Tersa, M, Lanyon-Hogg, T, Perez-Dorado, I, Sutherell, C.L, De Vita, E, Morgan, R.M.L, Tate, E.W, Cota, E.
Deposit date:2021-06-01
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Identification of the first structurally validated covalent ligands of the small GTPase RAB27A.
Rsc Med Chem, 13, 2022
7OPR
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BU of 7opr by Molmil
Rab27a fusion with Slp2a-RBDa1 effector covalent adduct with CB1 in C123
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Jamshidiha, M, Tersa, M, Lanyon-Hogg, T, Perez-Dorado, I, Sutherell, C.L, De Vita, E, Morgan, R.M.L, Tate, E.W, Cota, E.
Deposit date:2021-06-01
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Identification of the first structurally validated covalent ligands of the small GTPase RAB27A.
Rsc Med Chem, 13, 2022
7OPP
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BU of 7opp by Molmil
Crystal structure of the Rab27a fusion with Slp2a-RBDa1 effector for SF4 pocket drug targeting
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Synaptotagmin-like protein 2,Ras-related protein Rab-27A
Authors:Jamshidiha, M, Tersa, M, Lanyon-Hogg, T, Perez-Dorado, I, Sutherell, C.L, De Vita, E, Morgan, R.M.L, Tate, E.W, Cota, E.
Deposit date:2021-06-01
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Identification of the first structurally validated covalent ligands of the small GTPase RAB27A.
Rsc Med Chem, 13, 2022
3VT7
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BU of 3vt7 by Molmil
Crystal structures of rat VDR-LBD with W282R mutation
Descriptor: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL, COACTIVATOR PEPTIDE DRIP, Vitamin D3 receptor
Authors:Nakabayashi, M, Shimizu, M, Ikura, T, Ito, N.
Deposit date:2012-05-19
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of hereditary vitamin D-resistant rickets-associated vitamin D receptor mutants R270L and W282R bound to 1,25-dihydroxyvitamin D3 and synthetic ligands.
J.Med.Chem., 56, 2013
3VT5
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BU of 3vt5 by Molmil
Crystal structures of rat VDR-LBD with R270L mutation
Descriptor: (1R,2E,3R,5Z,7E)-17-{(1S)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethylidene)-9,10-secoestra-5,7,16-triene-1,3-diol, COACTIVATOR PEPTIDE DRIP, Vitamin D3 receptor
Authors:Nakabayashi, M, Shimizu, M, Ikura, T, Ito, N.
Deposit date:2012-05-19
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structures of hereditary vitamin D-resistant rickets-associated vitamin D receptor mutants R270L and W282R bound to 1,25-dihydroxyvitamin D3 and synthetic ligands.
J.Med.Chem., 56, 2013
3VT6
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BU of 3vt6 by Molmil
Crystal structure of rat VDR-LBD with 2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3
Descriptor: (1R,2Z,3R,5E,7E)-17-{(1S)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethylidene)-9,10-secoestra-5,7,16-triene-1,3-diol, COACTIVATOR PEPTIDE DRIP, Vitamin D3 receptor
Authors:Nakabayashi, M, Shimizu, M, Ikura, T, Ito, N.
Deposit date:2012-05-19
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of hereditary vitamin D-resistant rickets-associated vitamin D receptor mutants R270L and W282R bound to 1,25-dihydroxyvitamin D3 and synthetic ligands.
J.Med.Chem., 56, 2013
3VT4
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BU of 3vt4 by Molmil
Crystal structures of rat VDR-LBD with R270L mutation
Descriptor: (1R,2Z,3R,5E,7E)-17-{(1S)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethylidene)-9,10-secoestra-5,7,16-triene-1,3-diol, COACTIVATOR PEPTIDE DRIP, Vitamin D3 receptor
Authors:Nakabayashi, M, Shimizu, M, Ikura, T, Ito, N.
Deposit date:2012-05-19
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of hereditary vitamin D-resistant rickets-associated vitamin D receptor mutants R270L and W282R bound to 1,25-dihydroxyvitamin D3 and synthetic ligands.
J.Med.Chem., 56, 2013
3VT3
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BU of 3vt3 by Molmil
Crystal structures of rat VDR-LBD with R270L mutation
Descriptor: 1,2-ETHANEDIOL, 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL, COACTIVATOR PEPTIDE DRIP, ...
Authors:Nakabayashi, M, Shimizu, M, Ikura, T, Ito, N.
Deposit date:2012-05-19
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of hereditary vitamin D-resistant rickets-associated vitamin D receptor mutants R270L and W282R bound to 1,25-dihydroxyvitamin D3 and synthetic ligands.
J.Med.Chem., 56, 2013
3VT9
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BU of 3vt9 by Molmil
Crystal structures of rat VDR-LBD with W282R mutation
Descriptor: (1R,2Z,3R,5E,7E,9beta,17beta)-2-(2-hydroxyethylidene)-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9-(prop-2-en-1-yl)-9,10-secoestra-5,7-diene-1,3-diol, COACTIVATOR PEPTIDE DRIP, Vitamin D3 receptor
Authors:Nakabayashi, M, Shimizu, M, Ikura, T, Ito, N.
Deposit date:2012-05-19
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of hereditary vitamin D-resistant rickets-associated vitamin D receptor mutants R270L and W282R bound to 1,25-dihydroxyvitamin D3 and synthetic ligands.
J.Med.Chem., 56, 2013
3VT8
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BU of 3vt8 by Molmil
Crystal structures of rat VDR-LBD with W282R mutation
Descriptor: (1R,3R,7E,9beta,17beta)-9-butyl-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9,10-secoestra-5,7-diene-1,3-diol, COACTIVATOR PEPTIDE DRIP, Vitamin D3 receptor
Authors:Nakabayashi, M, Shimizu, M, Ikura, T, Ito, N.
Deposit date:2012-05-19
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of hereditary vitamin D-resistant rickets-associated vitamin D receptor mutants R270L and W282R bound to 1,25-dihydroxyvitamin D3 and synthetic ligands.
J.Med.Chem., 56, 2013
1C7Y
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BU of 1c7y by Molmil
E.COLI RUVA-HOLLIDAY JUNCTION COMPLEX
Descriptor: DNA (5'-D(P*DAP*DAP*DGP*DTP*DTP*DGP*DGP*DGP*DAP*DTP*DTP*DGP*DT)-3'), DNA (5'-D(P*DCP*DAP*DAP*DTP*DCP*DCP*DCP*DAP*DAP*DCP*DTP*DT)-3'), DNA (5'-D(P*DCP*DGP*DAP*DAP*DTP*DGP*DTP*DGP*DTP*DGP*DTP*DCP*DT)-3'), ...
Authors:Ariyoshi, M, Nishino, T, Iwasaki, H, Shinagawa, H, Morikawa, K.
Deposit date:2000-04-03
Release date:2000-07-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the holliday junction DNA in complex with a single RuvA tetramer.
Proc.Natl.Acad.Sci.USA, 97, 2000
8A0K
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BU of 8a0k by Molmil
crystal structure of the kinetoplastid kinetochore protein Trypanosoma brucei KKT3 Divergent Polo-Box domain
Descriptor: DI(HYDROXYETHYL)ETHER, Protein kinase, putative
Authors:Ishii, M, Ludzia, P, Marciano, G, Allen, W, Nerusheva, O.O, Akiyoshi, B.
Deposit date:2022-05-27
Release date:2022-06-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Divergent polo boxes in KKT2 bind KKT1 to initiate the kinetochore assembly cascade in Trypanosoma brucei.
Mol.Biol.Cell, 33, 2022
8A0J
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BU of 8a0j by Molmil
Crystal structure of the kinetoplastid kinetochore protein Trypanosoma congolense KKT2 divergent polo-box domain
Descriptor: Uncharacterized protein TCIL3000_11_11110
Authors:Ishii, M, Ludzia, P, Marciano, G, Allen, W, Nerusheva, O, Akiyoshi, B.
Deposit date:2022-05-27
Release date:2022-06-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Divergent polo boxes in KKT2 bind KKT1 to initiate the kinetochore assembly cascade in Trypanosoma brucei.
Mol.Biol.Cell, 33, 2022
1YUK
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BU of 1yuk by Molmil
The crystal structure of the PSI/Hybrid domain/ I-EGF1 segment from the human integrin beta2 at 1.8 resolution
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Integrin beta-2 A chain, Integrin beta-2 B chain
Authors:Shi, M, Sundramurthy, K, Liu, B, Tan, S.M, Law, S.K, Lescar, J.
Deposit date:2005-02-14
Release date:2005-07-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of the Plexin-Semaphorin-Integrin Domain/Hybrid Domain/I-EGF1 Segment from the Human Integrin {beta}2 Subunit at 1.8-A Resolution
J.Biol.Chem., 280, 2005
1A0F
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BU of 1a0f by Molmil
CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTATHIONESULFONIC ACID
Descriptor: GLUTATHIONE S-TRANSFERASE, GLUTATHIONE SULFONIC ACID
Authors:Nishida, M, Harada, S, Noguchi, S, Inoue, H, Takahashi, K, Satow, Y.
Deposit date:1997-11-29
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106.
J.Mol.Biol., 281, 1998

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