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2GGF
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BU of 2ggf by Molmil
Solution structure of the MA3 domain of human Programmed cell death 4
Descriptor: Programmed cell death 4, isoform 1
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-24
Release date:2007-04-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the MA3 domain of human Programmed cell death 4
To be Published
1IW7
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BU of 1iw7 by Molmil
Crystal structure of the RNA polymerase holoenzyme from Thermus thermophilus at 2.6A resolution
Descriptor: LEAD (II) ION, MAGNESIUM ION, RNA polymerase alpha subunit, ...
Authors:RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-04-22
Release date:2002-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution
NATURE, 417, 2002
3BOY
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BU of 3boy by Molmil
Crystal structure of the HutP antitermination complex bound to the HUT mRNA
Descriptor: 5'-R(*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ...
Authors:Kumarevel, T.S, Balasundaresan, D, Jeyakanthan, J, Shinkai, A, Yokoyama, S, Kumar, P.K.R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-12-18
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of HutP complexed with the 55-mer RNA
To be Published
4NYO
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BU of 4nyo by Molmil
The 1.8 Angstrom Crystal Structure of the Periplasmic Divalent Cation Tolerance Protein Cuta from Pyrococcus Horikoshii OT3
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Divalent-cation tolerance protein CutA, ...
Authors:Bagautdinov, B, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2013-12-11
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structures of the CutA1 proteins from Thermus thermophilus and Pyrococcus horikoshii: characterization of metal-binding sites and metal-induced assembly
ACTA CRYSTALLOGR.,SECT.F, 70, 2014
3U6U
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BU of 3u6u by Molmil
Crystal structure of the putative acetylglutamate kinase from thermus thermophilus
Descriptor: Putative acetylglutamate kinase, SULFATE ION
Authors:Karthe, P, Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-10-13
Release date:2011-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle
To be Published
4NYP
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BU of 4nyp by Molmil
The 2.0 Angstrom Crystal Structure of Pyrococcus Horikoshii Cuta1 Complexed With NA+
Descriptor: Divalent-cation tolerance protein CutA, SODIUM ION, SULFATE ION
Authors:Bagautdinov, B, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2013-12-11
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.0 Angstrom Crystal Structure of Pyrococcus Horikoshii Complexed with Na+
To be Published
2QYH
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BU of 2qyh by Molmil
Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
Descriptor: GLYCEROL, Hypothetical conserved protein, GK1056
Authors:Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-08-15
Release date:2008-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
To be Published
2QQ1
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BU of 2qq1 by Molmil
Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
Descriptor: Molybdenum cofactor biosynthesis MOG
Authors:Jeyakanthan, J, Mahesh, S, Kanaujia, S.P, Ramakumar, S, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-07-26
Release date:2008-07-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
To be Published
2QQ4
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BU of 2qq4 by Molmil
Crystal structure of Iron-sulfur cluster biosynthesis protein IscU (TTHA1736) from thermus thermophilus HB8
Descriptor: Iron-sulfur cluster biosynthesis protein IscU, ZINC ION
Authors:Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Agari, Y, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-07-26
Release date:2008-07-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Iron-sulfur cluster biosynthesis protein IscU (TTHA1736) from thermus thermophilus HB8
To be Published
7X9U
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BU of 7x9u by Molmil
Type-II KH motif of human mitochondrial RbfA
Descriptor: Putative ribosome-binding factor A, mitochondrial
Authors:Kuwasako, K, Suzuki, S, Furue, M, Takizawa, M, Takahashi, M, Tsuda, K, Nagata, T, Watanabe, S, Tanaka, A, Kobayashi, N, Kigawa, T, Guntert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2022-03-16
Release date:2023-01-25
Method:SOLUTION NMR
Cite:1 H, 13 C, and 15 N resonance assignments and solution structures of the KH domain of human ribosome binding factor A, mtRbfA, involved in mitochondrial ribosome biogenesis.
Biomol.Nmr Assign., 16, 2022
1VEJ
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BU of 1vej by Molmil
Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA
Descriptor: RIKEN cDNA 4931431F19
Authors:Higuchi, Y, Abe, T, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-31
Release date:2005-05-31
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA
To be Published
1VCS
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BU of 1vcs by Molmil
Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
Descriptor: Vesicle transport through interaction with t-SNAREs homolog 1A
Authors:Abe, T, Hirota, H, Tomizawa, T, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-10
Release date:2005-05-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
To be Published
1VG5
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BU of 1vg5 by Molmil
Solution Structure of RSGI RUH-014, a UBA domain from Arabidopsis cDNA
Descriptor: rhomboid family protein
Authors:Onuki, H, Doi-Katayama, Y, Hayashi, F, Hirota, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-04-23
Release date:2004-10-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-014, a UBA domain from Arabidopsis thaliana cDNA
To be Published
7CKJ
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BU of 7ckj by Molmil
Crystal structure of CMP kinase in complex with CMP from Thermus thermophilus HB8
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase
Authors:Mega, R, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2020-07-17
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structures of Thermus thermophilus CMP kinase complexed with a phosphoryl group acceptor and donor.
PLoS ONE, 15, 2020
1VEH
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BU of 1veh by Molmil
Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA
Descriptor: NifU-like protein HIRIP5
Authors:Ohashi, W, Hirota, H, Yamazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-31
Release date:2004-09-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA
To be published
7FBV
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BU of 7fbv by Molmil
The solution structure of the second RRM domain of Matrin-3
Descriptor: Matrin-3
Authors:Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2021-07-13
Release date:2022-02-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
6JRQ
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BU of 6jrq by Molmil
Crystal structure of adenylosuccinate synthetase, PurA, from Thermus thermophilus
Descriptor: 1,2-ETHANEDIOL, Adenylosuccinate synthetase, INOSINIC ACID
Authors:Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2019-04-05
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of adenylosuccinate synthetase, PurA, from Thermus thermophilus HB8
To Be Published
7FBR
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BU of 7fbr by Molmil
Solution structure of The first RNA binding domain of Matrin-3
Descriptor: Matrin-3
Authors:Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2021-07-12
Release date:2022-02-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
1VDH
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BU of 1vdh by Molmil
Structure-based functional identification of a novel heme-binding protein from thermus thermophilus HB8
Descriptor: muconolactone isomerase-like protein
Authors:Ebihara, A, Okamoto, A, Kousumi, Y, Yamamoto, H, Masui, R, Ueyama, N, Shibata, T, Inoue, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-22
Release date:2004-09-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.
J.STRUCT.FUNCT.GENOM., 6, 2005
1VEE
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BU of 1vee by Molmil
NMR structure of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana
Descriptor: proline-rich protein family
Authors:Pantoja-Uceda, D, Lopez-Mendez, B, Koshiba, S, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Tanaka, A, Seki, M, Shinozaki, K, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-30
Release date:2005-01-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana
Protein Sci., 14, 2005
1VFG
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BU of 1vfg by Molmil
Crystal structure of tRNA nucleotidyltransferase complexed with a primer tRNA and an incoming ATP analog
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, RNA (75-MER), poly A polymerase
Authors:Tomita, K, Fukai, S, Ishitani, R, Ueda, T, Takeuchi, N, Vassylyev, D.G, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-04-13
Release date:2004-08-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for template-independent RNA polymerization.
Nature, 430, 2004
1VDX
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BU of 1vdx by Molmil
Crystal Structure of a Pyrococcus horikoshii protein with similarities to 2'5' RNA-ligase
Descriptor: CHLORIDE ION, Hypothetical protein PH0099
Authors:Rehse, P.H, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-25
Release date:2005-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a putative 2'-5' RNA ligase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 61, 2005
1VDW
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BU of 1vdw by Molmil
A hypothetical protein PH1897 from Pyrococcus horikoshii with similarities for Inositol-1 monophosphatase
Descriptor: 1,2-ETHANEDIOL, hypothetical protein PH1897
Authors:Inagaki, E, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-25
Release date:2004-04-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The crystal structure of hypothetical protein PH1897 from Pyrococcus horikoshii with similarities for Inositol-1-monophosphatase.
To be Published
5GVQ
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BU of 5gvq by Molmil
Solution structure of the first RRM domain of human spliceosomal protein SF3b49
Descriptor: Splicing factor 3B subunit 4
Authors:Kuwasako, K, Nameki, N, Tsuda, K, Takahashi, M, Sato, A, Tochio, N, Inoue, M, Terada, T, Kigawa, T, Kobayashi, N, Shirouzu, M, Ito, T, Sakamoto, T, Wakamatsu, K, Guntert, P, Takahashi, S, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2016-09-06
Release date:2017-04-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the first RNA recognition motif domain of human spliceosomal protein SF3b49 and its mode of interaction with a SF3b145 fragment.
Protein Sci., 26, 2017
6LR2
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BU of 6lr2 by Molmil
SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-2 CONTAINING PROTEIN 2
Descriptor: YTH domain containing protein 2 (YTHDC2)
Authors:Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2020-01-15
Release date:2021-01-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-CONTAINING PROTEIN 2
TO BE PUBLISHED

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