Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5DDP
DownloadVisualize
BU of 5ddp by Molmil
L-glutamine riboswitch bound with L-glutamine
Descriptor: GLUTAMINE, MAGNESIUM ION, RNA (61-MER), ...
Authors:Ren, A, Patel, D.J.
Deposit date:2015-08-25
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
5K7E
DownloadVisualize
BU of 5k7e by Molmil
The structure of pistol ribozyme, soaked with Mn2+
Descriptor: DNA/RNA 11-MER, MANGANESE (II) ION, RNA 47-MER
Authors:Ren, A, Patel, D.
Deposit date:2016-05-26
Release date:2016-07-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage.
Nat.Chem.Biol., 12, 2016
4RGF
DownloadVisualize
BU of 4rgf by Molmil
Crystal structure of the in-line aligned env22 twister ribozyme soaked with Mn2+
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D.
Deposit date:2014-09-30
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2008 Å)
Cite:In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
4RGE
DownloadVisualize
BU of 4rge by Molmil
Crystal structure of the in-line aligned env22 twister ribozyme
Descriptor: MAGNESIUM ION, env22 twister ribozyme
Authors:Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D.
Deposit date:2014-09-30
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
4R96
DownloadVisualize
BU of 4r96 by Molmil
Structure of a Llama Glama Fab 48A2 against human cMet
Descriptor: Llama glama Fab 48A2 against human cMet H chain, Llama glama Fab 48A2 against human cMet L chain
Authors:Klarenbeek, A, El Mazouari, K, Desmyter, A, Blanchetot, C, Hultberg, A, Roovers, R.C, Cambillau, C, Spinelli, S, Del-Favero, J, Verrips, T, de Haard, H, Achour, I.
Deposit date:2014-09-03
Release date:2015-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Camelid Ig V genes reveal significant human homology not seen in therapeutic target genes, providing for a powerful therapeutic antibody platform.
MAbs, 7, 2015
5K7C
DownloadVisualize
BU of 5k7c by Molmil
The native structure of native pistol ribozyme
Descriptor: DNA/RNA 11-MER, MAGNESIUM ION, RNA 47-MER
Authors:Ren, A, Patel, D.
Deposit date:2016-05-26
Release date:2016-07-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage.
Nat.Chem.Biol., 12, 2016
5K7D
DownloadVisualize
BU of 5k7d by Molmil
The structure of native pistol ribozyme, bound to Iridium
Descriptor: DNA/RNA 11-MER, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ...
Authors:Ren, A, Patel, D.
Deposit date:2016-05-26
Release date:2016-07-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage.
Nat.Chem.Biol., 12, 2016
5DDO
DownloadVisualize
BU of 5ddo by Molmil
Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch
Descriptor: L-glutamine riboswitch (58-MER), U1 small nuclear ribonucleoprotein A
Authors:Ren, A, Patel, D.
Deposit date:2015-08-25
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
5DDQ
DownloadVisualize
BU of 5ddq by Molmil
L-glutamine riboswitch bound with L-glutamine soaked with Mn2+
Descriptor: GLUTAMINE, L-glutamine riboswitch RNA (61-MER), MAGNESIUM ION, ...
Authors:Ren, A, Patel, D.J.
Deposit date:2015-08-25
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
5DDR
DownloadVisualize
BU of 5ddr by Molmil
L-glutamine riboswitch bound with L-glutamine soaked with Cs+
Descriptor: CESIUM ION, GLUTAMINE, L-glutamine riboswitch RNA (61-MER), ...
Authors:Ren, A, Patel, D.J.
Deposit date:2015-08-25
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.605 Å)
Cite:Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
4ZNP
DownloadVisualize
BU of 4znp by Molmil
The structure of A pfI Riboswitch Bound to ZMP
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, MAGNESIUM ION, pfI Riboswitch
Authors:Ren, A, Patel, D.J, Rajashankar, R.K.
Deposit date:2015-05-05
Release date:2015-08-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Global RNA Fold and Molecular Recognition for a pfl Riboswitch Bound to ZMP, a Master Regulator of One-Carbon Metabolism.
Structure, 23, 2015
5KAX
DownloadVisualize
BU of 5kax by Molmil
The structure of CTR107 protein bound to RHODAMINE 6G
Descriptor: CTR107 protein, GLYCEROL, RHODAMINE 6G
Authors:Moreno, A, Wade, H.
Deposit date:2016-06-02
Release date:2016-08-24
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Solution Binding and Structural Analyses Reveal Potential Multidrug Resistance Functions for SAV2435 and CTR107 and Other GyrI-like Proteins.
Biochemistry, 55, 2016
5KAU
DownloadVisualize
BU of 5kau by Molmil
The structure of SAV2435 bound to RHODAMINE 6G
Descriptor: GLYCEROL, RHODAMINE 6G, SA2223 protein
Authors:Moreno, A, Wade, H.
Deposit date:2016-06-02
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Solution Binding and Structural Analyses Reveal Potential Multidrug Resistance Functions for SAV2435 and CTR107 and Other GyrI-like Proteins.
Biochemistry, 55, 2016
5KAW
DownloadVisualize
BU of 5kaw by Molmil
The structure of SAV2435 bound to TETRAPHENYLPHOSPHONIUM and RHODAMINE 6G
Descriptor: GLYCEROL, RHODAMINE 6G, SA2223 protein, ...
Authors:Moreno, A, Wade, H.
Deposit date:2016-06-02
Release date:2016-08-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Solution Binding and Structural Analyses Reveal Potential Multidrug Resistance Functions for SAV2435 and CTR107 and Other GyrI-like Proteins.
Biochemistry, 55, 2016
5KAV
DownloadVisualize
BU of 5kav by Molmil
The structure of SAV2435
Descriptor: GLYCEROL, SA2223 protein
Authors:Moreno, A, Wade, H.
Deposit date:2016-06-02
Release date:2016-08-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Solution Binding and Structural Analyses Reveal Potential Multidrug Resistance Functions for SAV2435 and CTR107 and Other GyrI-like Proteins.
Biochemistry, 55, 2016
5KAT
DownloadVisualize
BU of 5kat by Molmil
The structure of SAV2435 bound to TETRAPHENYLPHOSPHONIUM
Descriptor: GLYCEROL, SA2223 protein, TETRAPHENYLPHOSPHONIUM
Authors:Moreno, A, Wade, H.
Deposit date:2016-06-02
Release date:2016-08-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Solution Binding and Structural Analyses Reveal Potential Multidrug Resistance Functions for SAV2435 and CTR107 and Other GyrI-like Proteins.
Biochemistry, 55, 2016
5KCB
DownloadVisualize
BU of 5kcb by Molmil
The structure of SAV2435 bound to ethidium bromide
Descriptor: ETHIDIUM, SA2223 protein, SULFATE ION
Authors:Moreno, A, Wade, H.
Deposit date:2016-06-06
Release date:2016-08-24
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Solution Binding and Structural Analyses Reveal Potential Multidrug Resistance Functions for SAV2435 and CTR107 and Other GyrI-like Proteins.
Biochemistry, 55, 2016
4O9H
DownloadVisualize
BU of 4o9h by Molmil
Structure of Interleukin-6 in complex with a Camelid Fab fragment
Descriptor: Heavy Chain of the Camelid Fab fragment 61H7, Interleukin-6, Light Chain of the Camelid Fab fragment 61H7
Authors:Klarenbeek, A, Blanchetot, C, Schragel, G, Sadi, A.S, Ongenae, N, Hemrika, W, Wijdenes, J, Spinelli, S, Desmyter, A, Cambillau, C, Hultberg, A, Kretz-rommel, A, Dreier, T, De haard, H.J.W, Roovers, R.C.
Deposit date:2014-01-02
Release date:2015-04-15
Last modified:2015-04-29
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Combining residues of naturally-occurring Camelid somatic affinity variants yields ultra-potent human therapeutic IL-6 antibodies
To be Published
4R90
DownloadVisualize
BU of 4r90 by Molmil
Anti CD70 Llama glama Fab 27B3
Descriptor: Anti CD70 Llama glama Fab 27B3 Heavy chain, Anti CD70 Llama glama Fab 27B3 Light chain, CALCIUM ION, ...
Authors:Klarenbeek, A, El Mazouari, K, Desmyter, A, Blanchetot, C, Hultberg, A, Roovers, R.C, Cambillau, C, Spinelli, S, Del-Favero, J, Verrips, T, de Haard, H, Achour, I.
Deposit date:2014-09-03
Release date:2015-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.746 Å)
Cite:Camelid Ig V genes reveal significant human homology not seen in therapeutic target genes, providing for a powerful therapeutic antibody platform.
MAbs, 7, 2015
3QI8
DownloadVisualize
BU of 3qi8 by Molmil
Evolved variant of cytochrome P450 (BM3, CYP102A1)
Descriptor: Evolved Cytochrome P450 variant (22A3), PROTOPORPHYRIN IX CONTAINING FE
Authors:Rentmeister, A, Brown, T.R, Snow, C.D, Carbone, M.N, Arnold, F.H.
Deposit date:2011-01-26
Release date:2011-05-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Engineered Bacterial Mimics of Human Drug Metabolizing Enzyme CYP2C9
Chemcatchem, 2011
3DPA
DownloadVisualize
BU of 3dpa by Molmil
CRYSTAL STRUCTURE OF CHAPERONE PROTEIN PAPD REVEALS AN IMMUNOGLOBULIN FOLD
Descriptor: CHAPERONE PROTEIN PAPD
Authors:Holmgren, A, Branden, C.-I.
Deposit date:1991-10-09
Release date:1991-10-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of chaperone protein PapD reveals an immunoglobulin fold.
Nature, 342, 1989
1QL4
DownloadVisualize
BU of 1ql4 by Molmil
Structure of the soluble domain of cytochrome c552 from Paracoccus denitrificans in the oxidised state
Descriptor: CYTOCHROME C552, HEME C
Authors:Harrenga, A, Reincke, B, Rueterjans, H, Ludwig, B, Michel, H.
Deposit date:1999-08-20
Release date:2000-02-03
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the Soluble Domain of Cytochrome C552 from Paracoccus Denitrificans in the Oxidized and Reduced States
J.Mol.Biol., 295, 2000
2ESG
DownloadVisualize
BU of 2esg by Molmil
Solution structure of the complex between immunoglobulin IgA1 and human serum albumin
Descriptor: Immunoglobulin A1 heavy chain, Immunoglobulin A1 light chain, Serum albumin
Authors:Almogren, A, Furtado, P.B, Sun, Z, Perkins, S.J, Kerr, M.A.
Deposit date:2005-10-26
Release date:2006-01-31
Last modified:2024-02-14
Method:SOLUTION SCATTERING
Cite:Purification, Properties and Extended Solution Structure of the Complex Formed between Human Immunoglobulin A1 and Human Serum Albumin by Scattering and Ultracentrifugation.
J.Mol.Biol., 356, 2006
1QL3
DownloadVisualize
BU of 1ql3 by Molmil
Structure of the soluble domain of cytochrome c552 from Paracoccus denitrificans in the reduced state
Descriptor: CYTOCHROME C552, HEME C
Authors:Harrenga, A, Reincke, B, Rueterjans, H, Ludwig, B, Michel, H.
Deposit date:1999-08-20
Release date:2000-02-06
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of the Soluble Domain of Cytochrome C552 from Paracoccus Denitrificans in the Oxidized and Reduced States
J.Mol.Biol., 295, 2000
1QLE
DownloadVisualize
BU of 1qle by Molmil
CRYO-STRUCTURE OF THE PARACOCCUS DENITRIFICANS FOUR-SUBUNIT CYTOCHROME C OXIDASE IN THE COMPLETELY OXIDIZED STATE COMPLEXED WITH AN ANTIBODY FV FRAGMENT
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CCYTOCHROME C OXIDASE, ...
Authors:Harrenga, A, Michel, H.
Deposit date:1999-08-30
Release date:1999-12-02
Last modified:2022-05-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Cytochrome C Oxidase from Paracoccus Denitrificans Does not Change the Metal Center Ligation Upon Reduction
J.Biol.Chem., 274, 1999

219515

PDB entries from 2024-05-08

PDB statisticsPDBj update infoContact PDBjnumon