Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3N8D
DownloadVisualize
BU of 3n8d by Molmil
Crystal structure of Staphylococcus aureus VRSA-9 D-Ala:D-Ala ligase
分子名称: CHLORIDE ION, D-alanine--D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Saul, F.A, Haouz, A, Meziane-Cherif, D.
登録日2010-05-28
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis of vancomycin dependence in VanA-type Staphylococcus aureus VRSA-9.
J.Bacteriol., 192, 2010
2I8C
DownloadVisualize
BU of 2i8c by Molmil
Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, MAGNESIUM ION, ...
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-09-01
公開日2006-09-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I80
DownloadVisualize
BU of 2i80 by Molmil
Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: 3-CHLORO-2,2-DIMETHYL-N-[4-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE, D-alanine-D-alanine ligase
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M.-M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-08-31
公開日2006-09-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I87
DownloadVisualize
BU of 2i87 by Molmil
Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: D-alanine-D-alanine ligase, SULFATE ION
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-09-01
公開日2006-10-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3R23
DownloadVisualize
BU of 3r23 by Molmil
Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis
分子名称: 1,2-ETHANEDIOL, D-alanine--D-alanine ligase
著者Kim, Y, Mulligan, R, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-12
公開日2011-03-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis
To be Published
3R5F
DownloadVisualize
BU of 3r5f by Molmil
Crystal structure of D-alanine-D-alnine ligase from Xanthomonas oryzae pv. oryzae with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-alanine--D-alanine ligase 1, MAGNESIUM ION
著者Doan, T.T.N, Kim, J.K, Kang, L.W.
登録日2011-03-18
公開日2011-05-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ATP
To be Published
3R5X
DownloadVisualize
BU of 3r5x by Molmil
Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis complexed with ATP
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Kim, Y, Mulligan, R, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-20
公開日2011-04-06
最終更新日2015-07-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis complexed with ATP
To be Published
3Q1K
DownloadVisualize
BU of 3q1k by Molmil
The Crystal Structure of the D-alanyl-alanine Synthetase A from Salmonella enterica Typhimurium Complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase A, FORMIC ACID, ...
著者Zhang, R, Maltseva, N, Papazisi, L, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-12-17
公開日2011-01-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献The Crystal Structure of the D-alanyl-alanine Synthetase A from Salmonella enterica Typhimurium Complexed with ADP
To be Published
4C5A
DownloadVisualize
BU of 4c5a by Molmil
The X-ray crystal structures of D-alanyl-D-alanine ligase in complex ADP and D-cycloserine phosphate
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-ALANINE--D-ALANINE LIGASE, GLYCEROL, ...
著者Batson, S, Majce, V, Lloyd, A.J, Rea, D, Fishwick, C.W.G, Simmons, K.J, Fulop, V, Roper, D.I.
登録日2013-09-10
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Inhibition of D-Ala:D-Ala ligase through a phosphorylated form of the antibiotic D-cycloserine.
Nat Commun, 8, 2017
4ZQI
DownloadVisualize
BU of 4zqi by Molmil
Crystal structure of Apo D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: D-alanine--D-alanine ligase, SODIUM ION
著者Tran, H.-T, Kang, L.-W, Hong, M.-K, Ngo, H.P.T, Huynh, K.H, Ahn, Y.J.
登録日2015-05-10
公開日2016-01-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
4C5C
DownloadVisualize
BU of 4c5c by Molmil
The X-ray crystal structure of D-alanyl-D-alanine ligase in complex with ADP and D-ala-D-ala
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-ALANINE--D-ALANINE LIGASE, ...
著者Batson, S, Majce, V, Lloyd, A.J, Rea, D, Fishwick, C.W.G, Simmons, K.J, Fulop, V, Roper, D.I.
登録日2013-09-10
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Inhibition of D-Ala:D-Ala ligase through a phosphorylated form of the antibiotic D-cycloserine.
Nat Commun, 8, 2017
5BPF
DownloadVisualize
BU of 5bpf by Molmil
Crystal structure of ADP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-05-28
公開日2016-03-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5BPH
DownloadVisualize
BU of 5bph by Molmil
Crystal structure of AMP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, D-alanine--D-alanine ligase, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-05-28
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5C1O
DownloadVisualize
BU of 5c1o by Molmil
Crystal structure of AMP-PNP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: D-alanine--D-alanine ligase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-06-15
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
8EVV
DownloadVisualize
BU of 8evv by Molmil
Apo form of DdlA from Pseudomonas aeruginosa PAO1
分子名称: D-alanine--D-alanine ligase A
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVX
DownloadVisualize
BU of 8evx by Molmil
DdlA from Pseudomonas aeruginosa PAO1 in complex with ADP and phosphorylated D-cycloserine
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase A, MAGNESIUM ION, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVY
DownloadVisualize
BU of 8evy by Molmil
DdlB from Pseudomonas aeruginosa PAO1 in complex with ATP and D-ala-D-ala
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase B, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVZ
DownloadVisualize
BU of 8evz by Molmil
DdlB from Pseudomonas aeruginosa PAO1 in complex with ADP and phosphorylated D-cycloserine
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase B, MAGNESIUM ION, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVW
DownloadVisualize
BU of 8evw by Molmil
DdlA from Pseudomonas aeruginosa PAO1 in complex with ATP and D-ala-D-ala
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase A, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
5C1P
DownloadVisualize
BU of 5c1p by Molmil
Crystal structure of ADP and D-alanyl-D-alanine complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, ...
著者Tran, H.T, Kang, L.W, Hong, M.K, Ngo, H.P.T.
登録日2015-06-15
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
4C5B
DownloadVisualize
BU of 4c5b by Molmil
The X-ray crystal structure of D-alanyl-D-alanine ligase in complex with ATP and D-ala-D-ala
分子名称: ADENOSINE-5'-DIPHOSPHATE, CARBONATE ION, D-ALANINE, ...
著者Batson, S, Majce, V, Lloyd, A.J, Rea, D, Fishwick, C.W.G, Simmons, K.J, Fulop, V, Roper, D.I.
登録日2013-09-10
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of D-Ala:D-Ala ligase through a phosphorylated form of the antibiotic D-cycloserine.
Nat Commun, 8, 2017
4EG0
DownloadVisualize
BU of 4eg0 by Molmil
Crystal Structure of D-alanine--D-alanine ligase from Burkholderia ambifaria
分子名称: 1,2-ETHANEDIOL, D-alanine--D-alanine ligase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-03-30
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
4EGJ
DownloadVisualize
BU of 4egj by Molmil
Crystal structure of D-alanine-D-alanine ligase from Burkholderia xenovorans
分子名称: D-alanine--D-alanine ligase
著者SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-03-31
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
2YZM
DownloadVisualize
BU of 2yzm by Molmil
Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
分子名称: D-ALANINE, D-alanine--D-alanine ligase
著者Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
To be Published
2YZN
DownloadVisualize
BU of 2yzn by Molmil
Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
分子名称: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8
To be Published

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon