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PDB: 86 results

1XG7
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BU of 1xg7 by Molmil
Conserved hypothetical protein Pfu-877259-001 from Pyrococcus furiosus
Descriptor: hypothetical protein
Authors:Chang, J, Zhao, M, Horanyi, P, Xu, H, Yang, H, Liu, Z.-J, Chen, L, Zhou, W, Habel, J, Tempel, W, Lee, D, Lin, D, Chang, S.-H, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Chen, C.-Y, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Adams, M.W.W, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-16
Release date:2004-11-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Conserved hypothetical protein Pfu-877259-001 from Pyrococcus furiosus
To be published
6PFU
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BU of 6pfu by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state in a contracted unit cell
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.619 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
6PFR
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BU of 6pfr by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent on-state
Descriptor: Green fluorescent protein
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
6PFT
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BU of 6pft by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
6PFS
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BU of 6pfs by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent on-state in a contracted unit cell
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
1M2J
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BU of 1m2j by Molmil
Sir2 homologue H80N mutant-ADP ribose complex
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Silent Information Regulator 2, ZINC ION
Authors:Chang, J, Cho, Y.
Deposit date:2002-06-24
Release date:2003-04-08
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the NAD-dependent deacetylase mechanism of Sir2
J.BIOL.CHEM., 277, 2002
1M2H
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BU of 1m2h by Molmil
Sir2 homologue S24A mutant-ADP ribose complex
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Silent Information Regulator 2, ZINC ION
Authors:Chang, J, Cho, Y.
Deposit date:2002-06-24
Release date:2003-04-08
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the NAD-dependent deacetylase mechanism of Sir2
J.BIOL.CHEM., 277, 2002
1M2N
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BU of 1m2n by Molmil
Sir2 homologues (D102G/F159A/R170A) mutant-2'-O-acetyl ADP ribose complex
Descriptor: 2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE, Silent Information Regulator 2, ZINC ION
Authors:Chang, J, Cho, Y.
Deposit date:2002-06-24
Release date:2003-04-08
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the NAD-dependent deacetylase mechanism of Sir2
J.BIOL.CHEM., 277, 2003
1M2K
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BU of 1m2k by Molmil
Sir2 homologue F159A mutant-ADP ribose complex
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Silent Information Regulator 2, ZINC ION
Authors:Chang, J, Cho, Y.
Deposit date:2002-06-24
Release date:2003-04-08
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural basis for the NAD-dependent deacetylase mechanism of Sir2
J.BIOL.CHEM., 277, 2002
1M2G
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BU of 1m2g by Molmil
Sir2 homologue-ADP ribose complex
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Silent Information Regulator 2, ZINC ION
Authors:Chang, J, Cho, Y.
Deposit date:2002-06-24
Release date:2003-04-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the NAD-dependent deacetylase mechanism of Sir2
J.BIOL.CHEM., 277, 2002
3TUD
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BU of 3tud by Molmil
Crystal structure of SYK kinase domain with N-(4-methyl-3-(8-methyl-7-oxo-2-(phenylamino)-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl)phenyl)-3-(trifluoromethyl)benzamide
Descriptor: N-{4-methyl-3-[8-methyl-7-oxo-2-(phenylamino)-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl]phenyl}-3-(trifluoromethyl)benzamide, Tyrosine-protein kinase SYK
Authors:Lovering, F, McDonald, J, Whitlock, G, Glossop, P, Phillips, C, Sabnis, Y, Ryan, M, Fitz, L, Lee, J, Chang, J.S, Han, S, Kurumbail, R, Thorarenson, A.
Deposit date:2011-09-16
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Identification of Type-II Inhibitors Using Kinase Structures.
Chem.Biol.Drug Des., 80, 2012
5VIO
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BU of 5vio by Molmil
Crystal structure of ASK1 kinase domain with a potent inhibitor (analog 13)
Descriptor: 4-methoxy-N~1~-methyl-N~3~-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}benzene-1,3-dicarboxamide, Mitogen-activated protein kinase kinase kinase 5
Authors:Jasti, J, Chang, J, Kurumbail, R.
Deposit date:2017-04-17
Release date:2018-01-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Rational approach to highly potent and selective apoptosis signal-regulating kinase 1 (ASK1) inhibitors.
Eur J Med Chem, 145, 2017
5VIL
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BU of 5vil by Molmil
Crystal structure of ASK1 kinase domain with a potent inhibitor (analog 6)
Descriptor: 2-methoxy-N-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}-5-sulfamoylbenzamide, DIMETHYL SULFOXIDE, Mitogen-activated protein kinase kinase kinase 5
Authors:Jasti, J, Chang, J, Kurumbail, R.
Deposit date:2017-04-17
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Rational approach to highly potent and selective apoptosis signal-regulating kinase 1 (ASK1) inhibitors.
Eur J Med Chem, 145, 2017
5K5N
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BU of 5k5n by Molmil
Crystal structure of GSK-3beta complexed with PF-04802367, a highly selective brain-penetrant kinase inhibitor
Descriptor: 5-(3-chloranyl-4-methoxy-phenyl)-~{N}-[3-(1,2,4-triazol-1-yl)propyl]-1,3-oxazole-4-carboxamide, Glycogen synthase kinase-3 beta, SULFATE ION
Authors:Kurumbail, R.G, Chang, J.S.
Deposit date:2016-05-23
Release date:2016-09-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a Highly Selective Glycogen Synthase Kinase-3 Inhibitor (PF-04802367) That Modulates Tau Phosphorylation in the Brain: Translation for PET Neuroimaging.
Angew.Chem.Int.Ed.Engl., 55, 2016
8TOC
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BU of 8toc by Molmil
Acinetobacter phage AP205
Descriptor: Coat protein, Maturation protein, RNA (4269-MER)
Authors:Meng, R, Xing, Z, Chang, J, Zhang, J.
Deposit date:2023-08-03
Release date:2024-03-06
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural basis of Acinetobacter type IV pili targeting by an RNA virus.
Nat Commun, 15, 2024
3TUC
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BU of 3tuc by Molmil
Crystal structure of SYK kinase domain with 1-benzyl-N-(5-(6,7-dimethoxyquinolin-4-yloxy)pyridin-2-yl)-2-oxo-1,2-dihydropyridine-3-carboxamide
Descriptor: 1-benzyl-N-{5-[(6,7-dimethoxyquinolin-4-yl)oxy]pyridin-2-yl}-2-oxo-1,2-dihydropyridine-3-carboxamide, Tyrosine-protein kinase SYK
Authors:Lovering, F, McDonald, J, Whitlock, G, Glossop, P, Phillips, C, Sabnis, Y, Ryan, M, Fitz, L, Lee, J, Chang, J.S, Han, S, Kurumbail, R, Thorarenson, A.
Deposit date:2011-09-16
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of Type-II Inhibitors Using Kinase Structures.
Chem.Biol.Drug Des., 80, 2012
4E3R
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BU of 4e3r by Molmil
PLP-bound aminotransferase mutant crystal structure from Vibrio fluvialis
Descriptor: Pyruvate transaminase, SODIUM ION, SULFATE ION
Authors:Midelfort, K.S, Kumar, R, Han, S, Karmilowicz, M.J, McConnell, K, Gehlhaar, D.K, Mistry, A, Chang, J.S, Anderson, M, Vilalobos, A, Minshull, J, Govindarajan, S, Wong, J.W.
Deposit date:2012-03-10
Release date:2012-10-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Redesigning and characterizing the substrate specificity and activity of Vibrio fluvialis aminotransferase for the synthesis of imagabalin.
Protein Eng.Des.Sel., 26, 2013
4E3Q
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BU of 4e3q by Molmil
PMP-bound form of Aminotransferase crystal structure from Vibrio fluvialis
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, BENZAMIDINE, Pyruvate transaminase, ...
Authors:Midelfort, K.S, Kumar, R, Han, S, Karmilowicz, M.J, McConnell, K, Gehlhaar, D.K, Mistry, A, Chang, J.S, Anderson, M, Vilalobos, A, Minshull, J, Govindarajan, S, Wong, J.W.
Deposit date:2012-03-10
Release date:2012-10-10
Last modified:2013-01-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Redesigning and characterizing the substrate specificity and activity of Vibrio fluvialis aminotransferase for the synthesis of imagabalin.
Protein Eng.Des.Sel., 26, 2013
1XRG
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BU of 1xrg by Molmil
Conserved hypothetical protein from Clostridium thermocellum Cth-2968
Descriptor: Putative translation initiation inhibitor, yjgF family, UNKNOWN ATOM OR ION
Authors:Zhao, M, Chang, J, Habel, J, Kataeva, I, Xu, H, Chen, L, Lee, D, Nguyen, J, Chang, S.-H, Horanyi, P, Florence, Q, Zhou, W, Tempel, W, Lin, D, Zhang, H, Arendall III, W.B, Ljundahl, L, Liu, Z.-J, Rose, J, Richardson, J.S, Richardson, D.C, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-10-14
Release date:2004-12-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conserved hypothetical protein from Clostridium thermocellum Cth-2968
To be published
1XMA
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BU of 1xma by Molmil
Structure of a transcriptional regulator from Clostridium thermocellum Cth-833
Descriptor: MERCURY (II) ION, Predicted transcriptional regulator, UNKNOWN ATOM OR ION
Authors:Yang, H, Chen, L, Lee, D, Habel, J, Nguyen, J, Chang, S.-H, Kataeva, I, Xu, H, Chang, J, Zhao, M, Horanyi, P, Florence, Q, Zhou, W, Tempel, W, Lin, D, Praissman, J, Zhang, H, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Ljungdahl, L, Liu, Z.-J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-10-01
Release date:2004-12-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structure of a transcriptional regulator from Clostridium thermocellum Cth-833
To be published
1ZGH
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BU of 1zgh by Molmil
Methionyl-tRNA formyltransferase from Clostridium thermocellum
Descriptor: Methionyl-tRNA formyltransferase, UNKNOWN ATOM OR ION
Authors:Yang, H, Kataeva, I, Xu, H, Zhao, M, Chang, J, Liu, Z, Chen, L, Tempel, W, Habel, J, Zhou, W, Lee, D, Lin, D, Chang, S, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Wang, B, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2005-04-21
Release date:2005-05-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Methionyl-tRNA formyltransferase from Clostridium thermocellum
To be published
8E4Y
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BU of 8e4y by Molmil
Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with 2-oxohexadecyl-CoA
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl hexadecanoate, Glycerol-3-phosphate acyltransferase 1, mitochondrial, ...
Authors:Johnson, Z.L, Wasilko, D.J, Ammirati, M, Chang, J.S, Han, S, Wu, H.
Deposit date:2022-08-19
Release date:2022-12-21
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of the acyl-transfer mechanism of human GPAT1.
Nat.Struct.Mol.Biol., 30, 2023
8E50
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BU of 8e50 by Molmil
Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with CoA and palmitoyl-LPA
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl hexadecanoate, COENZYME A, Glycerol-3-phosphate acyltransferase 1, ...
Authors:Wasilko, D.J, Johnson, Z.L, Ammirati, M, Chang, J.S, Han, S, Wu, H.
Deposit date:2022-08-19
Release date:2022-12-21
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structural basis of the acyl-transfer mechanism of human GPAT1.
Nat.Struct.Mol.Biol., 30, 2023
4WST
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BU of 4wst by Molmil
The crystal structure of hemagglutinin from A/Taiwan/1/2013 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Authors:Yang, H, Carney, P.J, Chang, J, Villanueva, J.M, Stevens, J.
Deposit date:2014-10-28
Release date:2015-02-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes.
J.Virol., 89, 2015
7XZR
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BU of 7xzr by Molmil
Crystal structure of TNIK-AMPPNP-thiopeptide TP15 complex
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION, ...
Authors:Hamada, K, Vinogradov, A.A, Zhang, Y, Chang, J.S, Nishimura, H, Goto, Y, Onaka, H, Suga, H, Ogata, K, Sengoku, T.
Deposit date:2022-06-03
Release date:2022-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:De Novo Discovery of Thiopeptide Pseudo-natural Products Acting as Potent and Selective TNIK Kinase Inhibitors.
J.Am.Chem.Soc., 144, 2022

 

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