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1U5Y
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Crystal structure of murine APRIL, pH 8.0
Descriptor: Tumor necrosis factor ligand superfamily member 13
Authors:Wallweber, H.J, Compaan, D.M, Starovasnik, M.A, Hymowitz, S.G.
Deposit date:2004-07-28
Release date:2004-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of A Proliferation-inducing Ligand, APRIL.
J.Mol.Biol., 343, 2004
1U5X
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Crystal structure of murine APRIL at pH 5.0
Descriptor: Tumor necrosis factor ligand superfamily member 13
Authors:Wallweber, H.J, Compaan, D.M, Starovasnik, M.A, Hymowitz, S.G.
Deposit date:2004-07-28
Release date:2004-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of A Proliferation-inducing Ligand, APRIL.
J.Mol.Biol., 343, 2004
1XU1
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The crystal structure of APRIL bound to TACI
Descriptor: NICKEL (II) ION, Tumor necrosis factor ligand superfamily member 13, Tumor necrosis factor receptor superfamily member 13B
Authors:Hymowitz, S.G, Patel, D.R, Wallweber, H.J.A, Runyon, S, Yan, M, Yin, J, Shriver, S.K, Gordon, N.C, Pan, B, Skelton, N.J, Kelley, R.F, Starovasnik, M.A.
Deposit date:2004-10-25
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of APRIL-receptor complexes: Like BCMA, TACI employs only a single cysteine-rich domain for high-affinity ligand binding
J.Biol.Chem., 280, 2005
1XU2
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The crystal structure of APRIL bound to BCMA
Descriptor: NICKEL (II) ION, Tumor necrosis factor ligand superfamily member 13, Tumor necrosis factor receptor superfamily member 17
Authors:Hymowitz, S.G, Patel, D.R, Wallweber, H.J.A, Runyon, S, Yan, M, Yin, J, Shriver, S.K, Gordon, N.C, Pan, B, Skelton, N.J, Kelley, R.F, Starovasnik, M.A.
Deposit date:2004-10-25
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of APRIL-receptor complexes: Like BCMA, TACI employs only a single cysteine-rich domain for high-affinity ligand binding
J.Biol.Chem., 280, 2005
1S55
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Mouse RANKL Structure at 1.9A Resolution
Descriptor: CHLORIDE ION, Tumor necrosis factor ligand superfamily member 11
Authors:Teale, M.J, Feug, X, Chen, L, Bice, T, Meehan, E.J.
Deposit date:2004-01-19
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Murine RANKL Extra Cellular Domain Homotrimer Structure In Space Groups P212121 And H3 At 1.9 And 2.6 Respectively
To be Published
2AZ5
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Crystal Structure of TNF-alpha with a small molecule inhibitor
Descriptor: 6,7-DIMETHYL-3-[(METHYL{2-[METHYL({1-[3-(TRIFLUOROMETHYL)PHENYL]-1H-INDOL-3-YL}METHYL)AMINO]ETHYL}AMINO)METHYL]-4H-CHROMEN-4-ONE, Tumor necrosis factor (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) (Cachectin) [Contains: Tumor necrosis factor, membrane form; Tumor necrosis factor, ...
Authors:He, M.M.
Deposit date:2005-09-09
Release date:2005-11-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Small-molecule inhibition of TNF-alpha.
Science, 310, 2005
2QE3
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Crystal structure of human tl1a extracellular domain
Descriptor: CHLORIDE ION, TNF superfamily ligand TL1A
Authors:Zhan, C, Yan, Q, Patskovsky, Y, Shi, W, Toro, R, Bonanno, J, Nathenson, S.G, Almo, S.C.
Deposit date:2007-06-22
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry, 48, 2009
2RE9
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Crystal structure of TL1A at 2.1 A
Descriptor: GLYCEROL, MAGNESIUM ION, TNF superfamily ligand TL1A
Authors:Jin, T.C, Guo, F, Kim, S, Howard, A.J, Zhang, Y.Z.
Deposit date:2007-09-25
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystal structure of TNF ligand family member TL1A at 2.1 A.
Biochem.Biophys.Res.Commun., 364, 2007
2O0O
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Crystal structure of TL1A
Descriptor: MAGNESIUM ION, TNF superfamily ligand TL1A
Authors:Jin, T.C, Kim, S, Guo, F, Howard, A.J, Zhang, Y.Z.
Deposit date:2006-11-27
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray crystal structure of TNF ligand family member TL1A at 2.1A.
Biochem.Biophys.Res.Commun., 364, 2007
2E7A
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TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity
Descriptor: Tumor necrosis factor
Authors:Mukai, Y, Yamagata, Y, Tsutsumi, Y.
Deposit date:2007-01-09
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Creation and X-ray structure analysis of the tumor necrosis factor receptor-1-selective mutant of a tumor necrosis factor-alpha antagonist
J.Biol.Chem., 283, 2008
2Q8O
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crystal structure of mouse GITR ligand dimer
Descriptor: GITR ligand
Authors:Zhaocai, Z, Yukiko, T.
Deposit date:2007-06-11
Release date:2007-12-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for ligand-mediated mouse GITR activation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2QDN
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Crystal Structure of mouse GITRL
Descriptor: GITR ligand
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2007-06-21
Release date:2008-01-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Evolution of GITRL immune function: murine GITRL exhibits unique structural and biochemical properties within the TNF superfamily.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3B9I
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Crystal Structure of mouse GITRL at 2.5 A.
Descriptor: GITR ligand
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2007-11-05
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Evolution of GITRL immune function: murine GITRL exhibits unique structural and biochemical properties within the TNF superfamily.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RJK
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Crystal Structure of Human TL1A Extracellular Domain C95S Mutant
Descriptor: TNF superfamily ligand TL1A
Authors:Zhan, C, Yan, Q, Patskovsky, Y, Shi, W, Ramagopal, U.A, Toro, R, Bonanno, J, Nathenson, S.G, Almo, S.C.
Deposit date:2007-10-15
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry, 48, 2009
2RJL
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Crystal structure of human TL1A extracellular domain C95S/C135S mutant
Descriptor: TNF superfamily ligand TL1A
Authors:Zhan, C, Patskovsky, Y, Yan, Q, Shi, W, Toro, R, Bonanno, J, Nathenson, S.G, Almo, S.C.
Deposit date:2007-10-15
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry, 48, 2009
3FC0
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1.8 A crystal structure of murine GITR ligand dimer expressed in Drosophila melanogaster S2 cells
Descriptor: ACETATE ION, GITR ligand
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2008-11-20
Release date:2008-12-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:1.8 A structure of murine GITR ligand dimer expressed in Drosophila melanogaster S2 cells.
Acta Crystallogr.,Sect.D, 65, 2009
2ZJC
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TNFR1 selectve TNF mutant; R1-6
Descriptor: GLYCEROL, Tumor necrosis factor
Authors:Mukai, Y, Yamagata, Y, Tsutsumi, Y.
Deposit date:2008-03-05
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Function Relationship of Tumor Necrosis Factor (TNF) and Its Receptor Interaction Based on 3D Structural Analysis of a Fully Active TNFR1-Selective TNF Mutant
J.Mol.Biol., 385, 2009
2ZPX
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TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity; R1antTNF-T8
Descriptor: Tumor necrosis factor
Authors:Mukai, Y, Nakamura, T, Yamagata, Y, Tsutsumi, Y.
Deposit date:2008-07-29
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Fast binding kinetics and conserved 3D structure underlie the antagonistic activity of mutant TNF: useful information for designing artificial proteo-antagonists
J.Biochem., 146, 2009
3IT8
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Crystal structure of TNF alpha complexed with a poxvirus MHC-related TNF binding protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2L protein, Tumor necrosis factor
Authors:Yang, Z, West Jr, A.P, Bjorkman, P.J.
Deposit date:2009-08-27
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TNFalpha complexed with a poxvirus MHC-related TNF binding protein
Nat.Struct.Mol.Biol., 16, 2009
3K48
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Crystal structure of APRIL bound to a peptide
Descriptor: Tumor necrosis factor ligand superfamily member 13, peptide
Authors:Hymowitz, S.G.
Deposit date:2009-10-05
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Multiple novel classes of APRIL-specific receptor-blocking peptides isolated by phage display.
J.Mol.Biol., 396, 2010
3L9J
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Selection of a novel highly specific TNFalpha antagonist: Insight from the crystal structure of the antagonist-TNFalpha complex
Descriptor: MAGNESIUM ION, TNFalpha, Tumor necrosis factor, ...
Authors:Byla, P, Andersen, M.H, Thogersen, H.C, Gad, H.H, Hartmann, R.
Deposit date:2010-01-05
Release date:2010-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Selection of a novel and highly specific TNF{alpha} antagonist: insight from the crystal structure of the antagonist-TNF{alpha} complex
J.Biol.Chem., 285, 2010
2X29
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Crystal structure of human4-1BB ligand ectodomain
Descriptor: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 9
Authors:Won, E.Y, Cho, H.S.
Deposit date:2010-01-12
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structure of the Trimer of Human 4-1Bb Ligand is Unique Among Members of the Tumor Necrosis Factor Superfamily.
J.Biol.Chem., 285, 2010
3ME2
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Crystal structure of mouse RANKL-RANK complex
Descriptor: CHLORIDE ION, SODIUM ION, Tumor necrosis factor ligand superfamily member 11, ...
Authors:Walter, S.W, Liu, C.Z, Zhu, X.K, Wu, Y, Owens, R.J, Stuart, D.I, Gao, B, Ren, J.
Deposit date:2010-03-31
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and Functional Insights of RANKL-RANK Interaction and Signaling.
J.Immunol., 2010
3K51
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Crystal Structure of DcR3-TL1A complex
Descriptor: Decoy receptor 3, Tumor necrosis factor ligand superfamily member 15, secreted form
Authors:Zhan, C, Patskovsky, Y, Yan, Q, Li, Z, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2009-10-06
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Decoy Strategies: The Structure of TL1A:DcR3 Complex.
Structure, 19, 2011
3ALQ
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Crystal structure of TNF-TNFR2 complex
Descriptor: COBALT (II) ION, Tumor necrosis factor, Tumor necrosis factor receptor superfamily member 1B
Authors:Mukai, Y, Nakamura, T, Yamagata, Y, Tsutsumi, Y.
Deposit date:2010-08-06
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Solution of the Structure of the TNF-TNFR2 Complex
Sci.Signal., 3, 2010

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