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PDB: 577 results

6IGC
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BU of 6igc by Molmil
Crystal structure of HPV58/33/52 chimeric L1 pentamer
Descriptor: Major capsid protein L1
Authors:Li, Z.H, Song, S, He, M.Z, Gu, Y, Li, S.W.
Deposit date:2018-09-25
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Rational design of a triple-type human papillomavirus vaccine by compromising viral-type specificity.
Nat Commun, 9, 2018
4Y9L
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BU of 4y9l by Molmil
Crystal Structure of Caenorhabditis elegans ACDH-11
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Protein ACDH-11, isoform b
Authors:Li, Z.J, Zhai, Y.J, Zhang, K, Sun, F.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
Cell, 161, 2015
6IGD
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BU of 6igd by Molmil
Crystal structure of HPV58/33 chimeric L1 pentamer
Descriptor: Major capsid protein L1
Authors:Li, Z.H, Song, S, He, M.Z, Gu, Y, Li, S.W.
Deposit date:2018-09-25
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rational design of a triple-type human papillomavirus vaccine by compromising viral-type specificity.
Nat Commun, 9, 2018
1QBY
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BU of 1qby by Molmil
THE SOLUTION STRUCTURE OF A BAY-REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, 5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP* G)-3'
Authors:Li, Z, Mao, H, Kim, H.-Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:1999-04-27
Release date:1999-05-06
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Intercalation of the (-)-(1R,2S,3R, 4S)-N6-[1-benz[a]anthracenyl]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999
5XJ5
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BU of 5xj5 by Molmil
Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the monoacylglycerol form
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLYCINE, Glycerol-3-phosphate acyltransferase, ...
Authors:Li, Z, Li, D.
Deposit date:2017-04-30
Release date:2017-12-06
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
5XJ9
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BU of 5xj9 by Molmil
Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the orthophosphate form
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Glycerol-3-phosphate acyltransferase, PHOSPHATE ION
Authors:Li, Z, Tang, Y, Li, D.
Deposit date:2017-04-30
Release date:2017-12-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
3LWE
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BU of 3lwe by Molmil
The crystal structure of MPP8
Descriptor: M-phase phosphoprotein 8
Authors:Li, Z, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
Deposit date:2010-02-23
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
8WDM
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BU of 8wdm by Molmil
Crystal structure of a novel PU plastic degradation enzyme from Thermaerobacter marianensis
Descriptor: Carboxylic ester hydrolase
Authors:Li, Z.S, Wang, H, Gao, J, Chen, Y.Y, Wei, H.L, Li, Q, Han, X, Wei, R, Liu, W.D.
Deposit date:2023-09-15
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a novel PU plastic degradation enzyme from Thermaerobacter marianensis
To Be Published
6VSI
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BU of 6vsi by Molmil
Crystal structure of FKBP12 of Candida auris
Descriptor: Peptidylprolyl isomerase, SULFATE ION
Authors:Li, Z, Li, H, Hernandez, G, LeMaster, D.
Deposit date:2020-02-11
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure and transient dimerization for the FKBP12 protein from the pathogenic fungus Candida auris.
Biochem.Biophys.Res.Commun., 525, 2020
5JB1
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BU of 5jb1 by Molmil
Pseudo-atomic structure of Human Papillomavirus Type 59 L1 Virus-like Particle
Descriptor: Major capsid protein L1
Authors:Li, Z.H, Yan, X.D, Yu, H, Zheng, Q.B, Gu, Y, Li, S.W.
Deposit date:2016-04-13
Release date:2016-05-18
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6 Å)
Cite:The C-Terminal Arm of the Human Papillomavirus Major Capsid Protein Is Immunogenic and Involved in Virus-Host Interaction.
Structure, 24, 2016
5J6R
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BU of 5j6r by Molmil
Crystal structure of Human Papillomavirus Type 59 L1 pentamer
Descriptor: Major capsid protein L1
Authors:Li, Z.H, Yan, X.D, Yu, H, Gu, Y, Li, S.W.
Deposit date:2016-04-05
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.011 Å)
Cite:The C-Terminal Arm of the Human Papillomavirus Major Capsid Protein Is Immunogenic and Involved in Virus-Host Interaction.
Structure, 24, 2016
2QC3
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BU of 2qc3 by Molmil
Crystal structure of MCAT from Mycobacterium tuberculosis
Descriptor: ACETIC ACID, Malonyl CoA-acyl carrier protein transacylase
Authors:Li, Z, Huang, Y, Ge, J, Bartlam, M, Wang, H, Rao, Z.
Deposit date:2007-06-19
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of MCAT from Mycobacterium tuberculosis Reveals Three New Catalytic Models.
J.Mol.Biol., 371, 2007
6MX6
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BU of 6mx6 by Molmil
The Prp8 intein of Cryptococcus neoformans
Descriptor: Pre-mRNA-processing-splicing factor 8
Authors:Li, Z, Li, H.
Deposit date:2018-10-30
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Spliceosomal Prp8 intein at the crossroads of protein and RNA splicing.
Plos Biol., 17, 2019
6OWU
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BU of 6owu by Molmil
THE PRP8 INTEIN OF CRYPTOCOCCUS NEOFORMANS in complex with Zn2+
Descriptor: PRP8 protein, ZINC ION
Authors:Li, Z, Li, H.
Deposit date:2019-05-11
Release date:2019-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Spliceosomal Prp8 intein at the crossroads of protein and RNA splicing.
Plos Biol., 17, 2019
5BKH
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BU of 5bkh by Molmil
The splicing activity and an alternative domain-swapped structure of the Pyrococcus horikoshii PolII mini-intein
Descriptor: DNA polymerase II large subunit
Authors:Li, Z, Li, H.
Deposit date:2021-03-19
Release date:2021-08-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:An alternative domain-swapped structure of the Pyrococcus horikoshii PolII mini-intein.
Sci Rep, 11, 2021
3KYS
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BU of 3kys by Molmil
Crystal structure of human YAP and TEAD complex
Descriptor: 65 kDa Yes-associated protein, Transcriptional enhancer factor TEF-1
Authors:Li, Z, Zhao, B, Wang, P, Chen, F, Dong, Z, Yang, H, Guan, K.L, Xu, Y.
Deposit date:2009-12-07
Release date:2010-02-23
Last modified:2020-10-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the YAP and TEAD complex
Genes Dev., 24, 2010
8JW0
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BU of 8jw0 by Molmil
PSI-AcpPCI supercomplex from Amphidinium carterae
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Li, Z.H, Li, X.Y, Wang, W.D.
Deposit date:2023-06-28
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures and organizations of PSI-AcpPCI supercomplexes from red tidal and coral symbiotic photosynthetic dinoflagellates.
Proc.Natl.Acad.Sci.USA, 121, 2024
8JZE
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BU of 8jze by Molmil
PSI-AcpPCI supercomplex from Symbiodinium
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Li, Z.H, Li, X.Y, Wang, W.D.
Deposit date:2023-07-05
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Structures and organizations of PSI-AcpPCI supercomplexes from red tidal and coral symbiotic photosynthetic dinoflagellates.
Proc.Natl.Acad.Sci.USA, 121, 2024
5K08
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BU of 5k08 by Molmil
RecA mini intein-Zeise's salt complex
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, RecA mini intein, SULFATE ION, ...
Authors:Li, Z, Li, H.M.
Deposit date:2016-05-17
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structural insights into protein splicing inhibition by platinum therapeutics as potential anti-microbials
To be published
1I7V
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BU of 1i7v by Molmil
THE SOLUTION STRUCTURE OF A BAY REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, 5'-D(*CP*GP*GP*AP*CP*AP*(BZA)AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3'
Authors:Li, Z, Tamura, P.J, Wilkinson, A.S, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:2001-03-10
Release date:2001-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Intercalation of the (1R,2S,3R,4S)-N6-[1-(1,2,3,4-tetrahydro-2,3,4-trihydroxybenz[a]anthracenyl)]-2'-deoxyadenosyl adduct in the N-ras codon 61 sequence: DNA sequence effects
Biochemistry, 40, 2001
4Y9J
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BU of 4y9j by Molmil
Crystal Structure of Caenorhabditis elegans ACDH-11 in complex with C11-CoA
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Protein ACDH-11, isoform b, ...
Authors:Li, Z.J, Sun, F.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
Cell, 161, 2015
5JJO
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BU of 5jjo by Molmil
The crystal structure of immunity protein PA5088 from Pseudomonas aeruginosa
Descriptor: GOLD ION, Uncharacterized protein
Authors:Li, Z.Q, Gao, Z.Q, She, Z, Dong, Y.H.
Deposit date:2016-04-24
Release date:2016-08-31
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins
Febs Lett., 590, 2016
5JKP
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BU of 5jkp by Molmil
Crystal structure of immunity protein Pa5087 from Pseudomonas aeruginosa
Descriptor: Uncharacterized protein
Authors:Li, Z.Q, Gao, Z.Q, She, Z, Dong, Y.H.
Deposit date:2016-04-26
Release date:2016-08-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.106 Å)
Cite:Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins
Febs Lett., 590, 2016
6BS8
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BU of 6bs8 by Molmil
The class 3 DnaB intein from Mycobacterium smegmatis
Descriptor: Replicative DNA helicase
Authors:Li, Z, Kelley, D.S, Banavali, N, Belfort, M, Li, H.
Deposit date:2017-12-01
Release date:2018-11-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mycobacterial DnaB helicase intein as oxidative stress sensor.
Nat Commun, 9, 2018
8CWY
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BU of 8cwy by Molmil
Accurate computational design of genetically encoded 3D protein crystals
Descriptor: T32-15-1, T32-15-2
Authors:Li, Z, Borst, A.J, Baker, D.
Deposit date:2022-05-19
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Accurate computational design of three-dimensional protein crystals.
Nat Mater, 22, 2023

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