PDB: 674 件ウェブページステータス検索Chemie searchBIRD

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7PCX	X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-Q165W LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE 分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ... 著者 Tarnawski, M, Frei, M, Hiblot, J, Johnsson, K. 登録日 2021-08-04 公開日 2021-12-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Engineered HaloTag variants for fluorescence lifetime multiplexing. Nat.Methods, 19, 2022
7PCW	X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-M175W LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE 分子名称: CHLORIDE ION, Haloalkane dehalogenase, [9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium 著者 Tarnawski, M, Frei, M, Hiblot, J, Johnsson, K. 登録日 2021-08-04 公開日 2021-12-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Engineered HaloTag variants for fluorescence lifetime multiplexing. Nat.Methods, 19, 2022
7OKZ	CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) CATALYTICALLY INACTIVE H251A VARIANT COMPLEXED WITH 2-METHYL- QUINOLIN-4(1H)-ONE UNDER HYPEROXIC CONDITIONS 分子名称: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, 2-methyl-quinolin-4(1H)-one, D(-)-TARTARIC ACID, ... 著者 Bui, S, Steiner, R.A. 登録日 2021-05-18 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold. Chem Sci, 14, 2023
7OMO	Crystal structure of coelenteramine-bound Renilla reniformis luciferase RLuc8-D120A variant 分子名称: 4-[5-azanyl-6-(phenylmethyl)pyrazin-2-yl]phenol, CHLORIDE ION, GLYCEROL, ... 著者 Schenkmayerova, A, Marek, M. 登録日 2021-05-24 公開日 2022-06-01 最終更新日 2023-01-18 実験手法 X-RAY DIFFRACTION (1.451 Å) 主引用文献 Catalytic mechanism for Renilla-type luciferases Nat Catal, 2023
2DHD	CRYSTALLOGRAPHIC ANALYSIS OF THE CATALYTIC MECHANISM OF HALOALKANE DEHALOGENASE 分子名称: CHLORIDE ION, HALOALKANE DEHALOGENASE 著者 Verschueren, K.H.G, Dijkstra, B.W. 登録日 1993-09-08 公開日 1994-07-31 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase. Nature, 363, 1993
7OMR	Crystal structure of coelenteramide-bound Renilla reniformis luciferase RLuc8-D162A variant 分子名称: Coelenterazine h 2-monooxygenase, GLYCEROL, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE 著者 Schenkmayerova, A, Marek, M. 登録日 2021-05-24 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Catalytic mechanism for Renilla-type luciferases Nat Catal, 2023
7OMD	Crystal structure of azacoelenterazine-bound Renilla reniformis luciferase variant RLuc8-D162A 分子名称: 6-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-8-(phenylmethyl)-[1,2,4]triazolo[4,3-a]pyrazin-3-one, CHLORIDE ION, Coelenterazine h 2-monooxygenase, ... 著者 Schenkmayerova, A, Janin, Y.L, Marek, M. 登録日 2021-05-21 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.601 Å) 主引用文献 Catalytic mechanism for Renilla-type luciferases Nat Catal, 2023
2DHC	CRYSTALLOGRAPHIC ANALYSIS OF THE CATALYTIC MECHANISM OF HALOALKANE DEHALOGENASE 分子名称: 1,2-DICHLOROETHANE, HALOALKANE DEHALOGENASE 著者 Verschueren, K.H.G, Dijkstra, B.W. 登録日 1993-09-08 公開日 1994-07-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase. Nature, 363, 1993
7P4K	Soluble epoxide hydrolase in complex with FL217 分子名称: Bifunctional epoxide hydrolase 2, ~{N}-[[4-(cyclopropylsulfonylamino)-2-(trifluoromethyl)phenyl]methyl]-1-[(3-fluorophenyl)methyl]indole-5-carboxamide 著者 Ni, X, Kramer, J.S, Lillich, F, Proschak, E, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2021-07-11 公開日 2022-07-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure-Based Design of Dual Partial Peroxisome Proliferator-Activated Receptor gamma Agonists/Soluble Epoxide Hydrolase Inhibitors. J.Med.Chem., 64, 2021
6YL4	Soluble epoxide hydrolase in complex with 3-((R)-3-(1-hydroxyureido)but-1-yn-1-yl)-N-((S)-3-phenyl-3-(4-trifluoromethoxy)phenyl)propyl)benzamide 分子名称: 3-[(3~{R})-3-[aminocarbonyl(oxidanyl)amino]but-1-ynyl]-~{N}-[(3~{S})-3-phenyl-3-[4-(trifluoromethyloxy)phenyl]propyl]benzamide, Bifunctional epoxide hydrolase 2 著者 Kramer, J.S, Pogoryelov, D, Hiesinger, K, Proschak, E. 登録日 2020-04-06 公開日 2020-10-21 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.001 Å) 主引用文献 Design, Synthesis, and Structure-Activity Relationship Studies of Dual Inhibitors of Soluble Epoxide Hydrolase and 5-Lipoxygenase. J.Med.Chem., 63, 2020
6Y7A	X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate 分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ... 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2020-02-28 公開日 2021-03-31 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag. Biochemistry, 60, 2021
6Y7B	X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-carbopyronine fluorophore substrate 分子名称: 4-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]-2-[3-(dimethylamino)-6-(dimethyl-$l^{4}-azanylidene)-10,10-dimethyl-anthracen-9-yl]benzoic acid, CHLORIDE ION, Haloalkane dehalogenase 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2020-02-28 公開日 2021-03-31 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag. Biochemistry, 60, 2021
6YN2	Crystal structure of Renilla reniformis luciferase variant RLuc8-W121F/E144Q in complex with a coelenteramide (the postcatalytic enzyme-product complex) 分子名称: ACETATE ION, Coelenterazine h 2-monooxygenase, GLYCEROL, ... 著者 Damborsky, J, Marek, M. 登録日 2020-04-10 公開日 2021-04-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Engineering the protein dynamics of an ancestral luciferase. Nat Commun, 12, 2021
2BFN	The crystal structure of the complex of the haloalkane dehalogenase LinB with the product of dehalogenation reaction 1,2-dichloropropane. 分子名称: (2S)-2,3-DICHLOROPROPAN-1-OL, CALCIUM ION, CHLORIDE ION, ... 著者 Banas, P, Otyepka, M, Jerabek, P, Vevodova, J, Bohac, M, Damborsky, J. 登録日 2004-12-09 公開日 2006-06-26 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Weak Activity of Haloalkane Dehalogenase Linb with 1,2,3-Trichloropropane Revealed by X-Ray Crystallography and Microcalorimetry Appl.Environ.Microbiol., 73, 2007
2CJP	Structure of potato (Solanum tuberosum) epoxide hydrolase I (StEH1) 分子名称: 1,2-ETHANEDIOL, 2-PROPYLPENTANAMIDE, EPOXIDE HYDROLASE, ... 著者 Mowbray, S.L, Elfstrom, L.T, Ahlgren, K.M, Andersson, C.E, Widersten, M. 登録日 2006-04-05 公開日 2006-06-07 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 X-Ray Structure of Potato Epoxide Hydrolase Sheds Light on Substrate Specificity in Plant Enzymes. Protein Sci., 15, 2006
5LKA	Crystal structure of haloalkane dehalogenase LinB 140A+143L+177W+211L mutant (LinB86) from Sphingobium japonicum UT26 at 1.3 A resolution 分子名称: Haloalkane dehalogenase, THIOCYANATE ION 著者 Degtjarik, O, Rezacova, P, Iermak, I, Chaloupkova, R, Damborsky, J, Kuta Smatanova, I. 登録日 2016-07-21 公開日 2016-10-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.298 Å) 主引用文献 Engineering a de novo transport tunnel. Acs Catalysis, 2016
2EDC	CRYSTALLOGRAPHIC AND FLUORESCENCE STUDIES OF THE INTERACTION OF HALOALKANE DEHALOGENASE WITH HALIDE IONS: STUDIES WITH HALIDE COMPOUNDS REVEAL A HALIDE BINDING SITE IN THE ACTIVE SITE 分子名称: HALOALKANE DEHALOGENASE, IODIDE ION 著者 Verschueren, K.H.G, Dijkstra, B.W. 登録日 1993-08-31 公開日 1994-01-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystallographic and fluorescence studies of the interaction of haloalkane dehalogenase with halide ions. Studies with halide compounds reveal a halide binding site in the active site. Biochemistry, 32, 1993
5LIP	PSEUDOMONAS LIPASE COMPLEXED WITH RC-(RP, SP)-1,2-DIOCTYLCARBAMOYLGLYCERO-3-O-OCTYLPHOSPHONATE 分子名称: CALCIUM ION, OCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER, TRIACYL-GLYCEROL HYDROLASE 著者 Lang, D.A, Dijkstra, B.W. 登録日 1997-09-02 公開日 1998-08-19 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis of the chiral selectivity of Pseudomonas cepacia lipase Eur.J.Biochem., 254, 1998
2E3J	The crystal structure of epoxide hydrolase B (Rv1938) from mycobacterium tuberculosis at 2.1 angstrom 分子名称: ACETATE ION, EPOXIDE HYDROLASE EPHB 著者 Biswal, B.K, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB) 登録日 2006-11-27 公開日 2007-12-04 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The molecular structure of epoxide hydrolase B from Mycobacterium tuberculosis and its complex with a urea-based inhibitor. J.Mol.Biol., 381, 2008
2EDA	CRYSTALLOGRAPHIC AND FLUORESCENCE STUDIES OF THE INTERACTION OF HALOALKANE DEHALOGENASE WITH HALIDE IONS: STUDIES WITH HALIDE COMPOUNDS REVEAL A HALIDE BINDING SITE IN THE ACTIVE SITE 分子名称: HALOALKANE DEHALOGENASE, IODIDE ION 著者 Verschueren, K.H.G, Dijkstra, B.W. 登録日 1993-08-30 公開日 1993-10-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Crystallographic and fluorescence studies of the interaction of haloalkane dehalogenase with halide ions. Studies with halide compounds reveal a halide binding site in the active site. Biochemistry, 32, 1993
2B61	Crystal Structure of Homoserine Transacetylase 分子名称: Homoserine O-acetyltransferase 著者 Mirza, I.A, Nazi, I, Korczynska, M, Wright, G.D, Berghuis, A.M. 登録日 2005-09-29 公開日 2005-11-15 最終更新日 2018-02-07 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal Structure of Homoserine Transacetylase from Haemophilus influenzae Reveals a New Family of alpha/beta-Hydrolases Biochemistry, 44, 2005
6ZCC	X-ray structure of the Haloalkane dehalogenase HOB (HaloTag7-based Oligonucleotide Binder) labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate 分子名称: ACETATE ION, CALCIUM ION, Haloalkane dehalogenase, ... 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2020-06-10 公開日 2021-04-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag. Biochemistry, 60, 2021
7A43	Fluoroacetate Dehalogenase measured by serial femtosecond crystallography 分子名称: CHLORIDE ION, Fluoroacetate dehalogenase 著者 Mehrabi, P, Schulz, E.C, Buecker, R. 登録日 2020-08-19 公開日 2021-04-07 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison. Sci Adv, 7, 2021
4OSE	X-ray Crystal Structure of a Putative Hydrolase from Rickettsia typhi 分子名称: Putative Hydrolase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2014-02-12 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 X-ray Crystal Structure of a Putative Hydrolase from Rickettsia typhi TO BE PUBLISHED
7A42	Fluoroacetate Dehalogenase measured by serial synchrotron crystallography 分子名称: CHLORIDE ION, Fluoroacetate dehalogenase 著者 Mehrabi, P, Schulz, E.C, Buecker, R. 登録日 2020-08-19 公開日 2021-04-07 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison. Sci Adv, 7, 2021

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