Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2YQ5
DownloadVisualize
BU of 2yq5 by Molmil
Crystal Structure of D-isomer specific 2-hydroxyacid dehydrogenase from Lactobacillus delbrueckii ssp. bulgaricus: NAD complexed form
分子名称: D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Holton, S.J, Anandhakrishnan, M, Geerlof, A, Wilmanns, M.
登録日2012-11-05
公開日2012-11-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural Characterization of D-Isomer Specific 2-Hydroxyacid Dehydrogenase from Lactobacillus Delbrueckii Ssp. Bulgaricus
J.Struct.Biol., 181, 2013
3FN4
DownloadVisualize
BU of 3fn4 by Molmil
Apo-form of NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C-1 in closed conformation
分子名称: GLYCEROL, NAD-dependent formate dehydrogenase, SULFATE ION
著者Shabalin, I.G, Polyakov, K.M, Filippova, E.V, Dorovatovskiy, P.V, Tikhonova, T.V, Sadykhov, E.G, Tishkov, V.I, Popov, V.O.
登録日2008-12-23
公開日2009-12-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft
Acta Crystallogr.,Sect.D, 65, 2009
8HTY
DownloadVisualize
BU of 8hty by Molmil
Candida boidinii Formate Dehydrogenase Crystal Structure at 1.4 Angstrom Resolution
分子名称: Formate dehydrogenase, SULFATE ION
著者Gul, M, Yuksel, B, Bulut, H, DeMirci, H.
登録日2022-12-22
公開日2023-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
3EVT
DownloadVisualize
BU of 3evt by Molmil
Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum
分子名称: Phosphoglycerate dehydrogenase
著者Bonanno, J.B, Gilmore, M, Bain, K.T, Do, J, Sampathkumar, P, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-10-13
公開日2008-10-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum
To be Published
5Z20
DownloadVisualize
BU of 5z20 by Molmil
The ternary structure of D-lactate dehydrogenase from Pseudomonas aeruginosa with NADH and oxamate
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-lactate dehydrogenase (Fermentative), DI(HYDROXYETHYL)ETHER, ...
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2017-12-28
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria.
Biochemistry, 57, 2018
8HPG
DownloadVisualize
BU of 8hpg by Molmil
Crystal structure of phenylpyruvate reductase from Lactobacillus sp. CGMCC 9967
分子名称: Phenylpyruvate reductase
著者Yang, J.H, Song, W.
登録日2022-12-12
公開日2023-12-20
実験手法X-RAY DIFFRACTION (3.895 Å)
主引用文献One-Pot Biocatalytic Transformation of L-DOPA to D-Danshensu
To Be Published
5Z21
DownloadVisualize
BU of 5z21 by Molmil
The ternary structure of D-lactate dehydrogenase from Fusobacterium nucleatum with NADH and oxamate
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-lactate dehydrogenase, OXAMIC ACID
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2017-12-28
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria.
Biochemistry, 57, 2018
8IQ7
DownloadVisualize
BU of 8iq7 by Molmil
Ambient Temperature Crystal Structure of Candida boidinii Formate Dehydrogenase
分子名称: Formate dehydrogenase
著者Gul, M, DeMirci, H.
登録日2023-03-16
公開日2023-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
5Z1Z
DownloadVisualize
BU of 5z1z by Molmil
The apo-structure of D-lactate dehydrogenase from Escherichia coli
分子名称: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2017-12-28
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria.
Biochemistry, 57, 2018
8IVJ
DownloadVisualize
BU of 8ivj by Molmil
Candida boidinii Formate Dehydrogenase V120T Mutant
分子名称: Formate dehydrogenase
著者Gul, M, Yuksel, B, Bulut, H, DeMirci, H.
登録日2023-03-28
公開日2023-05-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
3GA0
DownloadVisualize
BU of 3ga0 by Molmil
CtBP1/BARS Gly172->Glu mutant structure: impairing NAD(H) binding and dimerization
分子名称: C-terminal-binding protein 1, FORMIC ACID
著者Nardini, M, Valente, C, Ricagno, S, Luini, A, Corda, D, Bolognesi, M.
登録日2009-02-16
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献CtBP1/BARS Gly172-->Glu mutant structure: impairing NAD(H)-binding and dimerization
Biochem.Biophys.Res.Commun., 381, 2009
8I5Z
DownloadVisualize
BU of 8i5z by Molmil
LDH Mutant P101Q-(An unexpected single-point mutation triggers the unleashing of catalytic potential of a NADH-dependent dehydrogenase)
分子名称: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
著者Liu, J.Q.
登録日2023-01-26
公開日2023-09-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Characterization of the Pro101Gln mutation that enhances the catalytic performance of T. indicus NADH-dependent d-lactate dehydrogenase.
Structure, 31, 2023
3GG9
DownloadVisualize
BU of 3gg9 by Molmil
CRYSTAL STRUCTURE OF putative D-3-phosphoglycerate dehydrogenase oxidoreductase from Ralstonia solanacearum
分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
著者Patskovsky, Y, Ramagopal, U, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-02-27
公開日2009-03-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase from Ralstonia Solanacearum
To be Published
5DNA
DownloadVisualize
BU of 5dna by Molmil
Crystal structure of Candida boidinii formate dehydrogenase
分子名称: FORMATE DEHYDROGENASE, SULFATE ION
著者Guo, Q, Gakhar, L, Wichersham, K, Francis, K, Vardi-Kilshtain, A, Major, D.T, Cheatum, C.M, Kohen, A.
登録日2015-09-09
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and Kinetic Studies of Formate Dehydrogenase from Candida boidinii.
Biochemistry, 55, 2016
5DT9
DownloadVisualize
BU of 5dt9 by Molmil
Crystal structure of a putative D-Erythronate-4-Phosphate Dehydrogenase from Vibrio cholerae
分子名称: CHLORIDE ION, Erythronate-4-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Stogios, P.J, Skarina, T, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-09-17
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.663 Å)
主引用文献Crystal structure of a putative D-Erythronate-4-Phosphate Dehydrogenase from Vibrio cholerae
To Be Published
6ABI
DownloadVisualize
BU of 6abi by Molmil
The apo-structure of D-lactate dehydrogenase from Fusobacterium nucleatum
分子名称: D-lactate dehydrogenase, GLYCEROL, SULFATE ION
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2018-07-21
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria
Biochemistry, 57, 2018
6ABJ
DownloadVisualize
BU of 6abj by Molmil
The apo-structure of D-lactate dehydrogenase from Pseudomonas aeruginosa
分子名称: ACETATE ION, D-lactate dehydrogenase (Fermentative)
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2018-07-21
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria
Biochemistry, 57, 2018
3GVX
DownloadVisualize
BU of 3gvx by Molmil
Crystal structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum
分子名称: Glycerate dehydrogenase related protein, POTASSIUM ION
著者Syed Ibrahim, B, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-03-31
公開日2009-04-28
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum
To be Published
5DN9
DownloadVisualize
BU of 5dn9 by Molmil
Crystal structure of Candida boidinii formate dehydrogenase complexed with NAD+ and azide
分子名称: AZIDE ION, CHLORIDE ION, FDH, ...
著者Guo, Q, Gakhar, L, Wichersham, K, Francis, K, Vardi-Kilshtain, A, Major, D.T, Cheatum, C.M, Kohen, A.
登録日2015-09-09
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Kinetic Studies of Formate Dehydrogenase from Candida boidinii.
Biochemistry, 55, 2016
3BAZ
DownloadVisualize
BU of 3baz by Molmil
Structure of hydroxyphenylpyruvate reductase from coleus blumei in complex with NADP+
分子名称: Hydroxyphenylpyruvate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Janiak, V, Klebe, G, Petersen, M, Heine, A.
登録日2007-11-09
公開日2008-11-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and substrate docking of a hydroxy(phenyl)pyruvate reductase from the higher plant Coleus blumei Benth
Acta Crystallogr.,Sect.D, 66, 2010
3BA1
DownloadVisualize
BU of 3ba1 by Molmil
Structure of hydroxyphenylpyruvate reductase from coleus blumei
分子名称: Hydroxyphenylpyruvate reductase
著者Janiak, V, Klebe, G, Petersen, M, Heine, A.
登録日2007-11-07
公開日2008-11-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structure and substrate docking of a hydroxy(phenyl)pyruvate reductase from the higher plant Coleus blumei Benth.
Acta Crystallogr.,Sect.D, 66, 2010
6BII
DownloadVisualize
BU of 6bii by Molmil
Crystal Structure of Pyrococcus yayanosii Glyoxylate Hydroxypyruvate Reductase in complex with NADP and malonate (re-refinement of 5AOW)
分子名称: GLYCEROL, Glyoxylate reductase, MALONATE ION, ...
著者Lassalle, L, Shabalin, I.G, Girard, E, Minor, W.
登録日2017-11-02
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases.
Sci Rep, 6, 2016
3DC2
DownloadVisualize
BU of 3dc2 by Molmil
Crystal structure of serine bound D-3-phosphoglycerate dehydrogenase from Mycobacterium tuberculosis
分子名称: D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID, SERINE
著者Dey, S, Sacchettini, J.C.
登録日2008-06-03
公開日2008-07-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural analysis of substrate and effector binding in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry, 47, 2008
3DDN
DownloadVisualize
BU of 3ddn by Molmil
Crystal structure of hydroxypyruvic acid phosphate bound D-3-phosphoglycerate dehydrogenase in mycobacterium tuberculosis
分子名称: 2-oxo-3-(phosphonooxy)propanoic acid, D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID
著者Dey, S, Sacchettini, J.C.
登録日2008-06-05
公開日2008-07-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural analysis of substrate and effector binding in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry, 47, 2008
5N6C
DownloadVisualize
BU of 5n6c by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with NAD and L-Tartrate
分子名称: D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Unterlass, J.E, Basle, A, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
登録日2017-02-14
公開日2017-11-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the enzymatic activity and potential substrate promiscuity of human 3-phosphoglycerate dehydrogenase (PHGDH).
Oncotarget, 8, 2017

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon