PDB: 121 件ウェブページステータス検索Chemie searchBIRD

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2WWG	Plasmodium falciparum thymidylate kinase in complex with dGMP and ADP 分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ... 著者 Whittingham, J.L, Carrero-Lerida, J, Brannigan, J.A, Ruiz-Perez, L.M, Silva, A.P, Fogg, M.J, Wilkinson, A.J, Gilbert, I.H, Wilson, K.S, Gonzalez-Pacanowska, D. 登録日 2009-10-23 公開日 2010-04-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for the Efficient Phosphorylation of Aztmp and Dgmp by Plasmodium Falciparum Type I Thymidylate Kinase. Biochem.J., 428, 2010
2WWH	Plasmodium falciparum thymidylate kinase in complex with AP5dT 分子名称: P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE, SODIUM ION, THYMIDILATE KINASE, ... 著者 Whittingham, J.L, Carrero-Lerida, J, Brannigan, J.A, Ruiz-Perez, L.M, Silva, A.P.G, Fogg, M.J, Wilkinson, A.J, Gilbert, I.H, Wilson, K.S, Gonzalez-Pacanowska, D. 登録日 2009-10-23 公開日 2010-04-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Basis for the Efficient Phosphorylation of Aztmp and Dgmp by Plasmodium Falciparum Type I Thymidylate Kinase. Biochem.J., 428, 2010
2XX3	HUMAN THYMIDYLATE KINASE COMPLEXED WITH thymidine butenyl phosphonate monophosphate and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, N1-[(E)-4-DIHYDROXYPHOSPHONYL-BUT-2-ENYL]-THYMINE, ... 著者 Caillat, C, Meyer, P. 登録日 2010-11-08 公開日 2011-12-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Novel Antiviral C5-Substituted Pyrimidine Acyclic Nucleoside Phosphonates Selected as Human Thymidylate Kinase Substrates. J.Med.Chem., 54, 2011
2YOG	Plasmodium falciparum thymidylate kinase in complex with a (thio)urea- alpha-deoxythymidine inhibitor 分子名称: 1-[4-chloranyl-3-(trifluoromethyl)phenyl]-3-[[(2R,3S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]thiourea, THYMIDYLATE KINASE 著者 Huaqing, C, Carrero-Lerida, J, Silva, A.P.G, Whittingham, J.L, Brannigan, J.A, Ruiz-Perez, L.M, Read, K.D, Wilson, K.S, Gonzalez-Pacanowska, D, Gilbert, I.H. 登録日 2012-10-24 公開日 2013-07-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Synthesis and Evaluation of Alpha-Thymidine Analogues as Novel Antimalarials. J.Med.Chem., 55, 2012
2YOH	Plasmodium falciparum thymidylate kinase in complex with a urea-alpha- deoxythymidine inhibitor 分子名称: 1-[[(2R,3S,5S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]-3-(4-nitrophenyl)urea, THYMIDYLATE KINASE 著者 Huaqing, C, Carrero-Lerida, J, Silva, A.P.G, Whittingham, J.L, Brannigan, J.A, Ruiz-Perez, L.M, Read, K.D, Wilson, K.S, Gonzalez-Pacanowska, D, Gilbert, I.H. 登録日 2012-10-24 公開日 2013-07-24 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Synthesis and Evaluation of Alpha-Thymidine Analogues as Novel Antimalarials. J.Med.Chem., 55, 2012
2YOF	Plasmodium falciparum thymidylate kinase in complex with a (thio)urea- beta-deoxythymidine inhibitor 分子名称: 1-[4-chloranyl-3-(trifluoromethyl)phenyl]-3-[[(2R,3S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]thiourea, ACETATE ION, THYMIDYLATE KINASE, ... 著者 Huaqing, C, Carrero-Lerida, J, Silva, A.P.G, Whittingham, J.L, Brannigan, J.A, Ruiz-Perez, L.M, Read, K.D, Wilson, K.S, Gonzalez-Pacanowska, D, Gilbert, I.H. 登録日 2012-10-24 公開日 2013-07-24 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Synthesis and Evaluation of Alpha-Thymidine Analogues as Novel Antimalarials. J.Med.Chem., 55, 2012
5TMP	COMPLEX OF E. COLI THYMIDYLATE KINASE WITH THE BISUBSTRATE INHIBITOR AZTP5A 分子名称: P1-(5'-ADENOSYL)P5-(5'-(3'AZIDO-3'-DEOXYTHYMIDYL))PENTAPHOSPHATE, PROTEIN (THYMIDYLATE KINASE) 著者 Lavie, A, Ostermann, N, Schlichting, I. 登録日 1998-09-01 公開日 1998-11-25 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Structural basis for efficient phosphorylation of 3'-azidothymidine monophosphate by Escherichia coli thymidylate kinase. Proc.Natl.Acad.Sci.USA, 95, 1998
5UIV	Structure of Thymidylate Kinase from Candida albicans Reveals Origin of Broad Substrate Specificity and a Novel Structural Element. 分子名称: ADENOSINE-5'-DIPHOSPHATE, Bifunctional thymidylate/uridylate kinase, MAGNESIUM ION, ... 著者 Sinha, K, Rule, G.S. 登録日 2017-01-15 公開日 2017-08-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 The Structure of Thymidylate Kinase from Candida albicans Reveals a Unique Structural Element. Biochemistry, 56, 2017
5XB3	ADP-dTMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5 分子名称: ADENOSINE-5'-DIPHOSPHATE, THYMIDINE-5'-PHOSPHATE, Thymidylate kinase 著者 Biswas, A, Jeyakanthan, J, Sekar, K. 登録日 2017-03-15 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate FEBS J., 284, 2017
5X8D	D90L mutant of thermus thermophilus HB8 thymidylate kinase 分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Thymidylate kinase 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-02 公開日 2018-03-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5X8K	V158T mutant of thermus thermophilus HB8 thymidylate kinase 分子名称: CHLORIDE ION, SODIUM ION, Thymidylate kinase 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-03 公開日 2018-03-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5X8B	Crystal structure of ATP-TMP and ADP bound thymidylate kinase from Thermus thermophilus HB8 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-01 公開日 2018-03-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5X8V	Y92H mutant of thermus thermophilus HB8 thymidylate kinase 分子名称: CHLORIDE ION, SODIUM ION, Thymidylate kinase 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-03 公開日 2018-03-14 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5X98	Y162F mutant of thermus thermophilus HB8 thymidylate kinase 分子名称: FORMIC ACID, MAGNESIUM ION, Thymidylate kinase 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-05 公開日 2018-03-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5XBH	Crystal structure of R145E mutant of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5 分子名称: Thymidylate kinase 著者 Biswas, A, Jeyakanthan, J, Sekar, K. 登録日 2017-03-17 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate. FEBS J., 284, 2017
5X86	Crystal structure of TMP bound thymidylate kinase from thermus thermophilus HB8 分子名称: CHLORIDE ION, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE, ... 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-01 公開日 2018-03-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5XAL	Y99F mutant of Thermus thermophilus HB8 thymidylate kinase 分子名称: FORMIC ACID, MAGNESIUM ION, Thymidylate kinase 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-14 公開日 2018-03-14 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5XB5	Crystal structure of R90A mutant of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5 分子名称: PHOSPHATE ION, Thymidylate kinase 著者 Biswas, A, Jeyakanthan, J, Sekar, K. 登録日 2017-03-15 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate. FEBS J., 284, 2017
1MRS	CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH 5-CH2OH DEOXYURIDINE MONOPHOSPHATE 分子名称: 5-HYDROXYMETHYLURIDINE-2'-DEOXY-5'-MONOPHOSPHATE, MAGNESIUM ION, SULFATE ION, ... 著者 Haouz, A, Vanheusden, V, Munier-Lehmann, H, Froeyen, M, Herdewijn, P, Van Calenbergh, S, Delarue, M. 登録日 2002-09-18 公開日 2003-01-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Enzymatic and structural analysis of inhibitors designed against Mycobacterium tuberculosis thymidylate kinase. New insights into the phosphoryl transfer mechanism. J.Biol.Chem., 278, 2003
5XT8	Magnesium bound apo structure of thymidylate kinase (form I) from Thermus thermophilus HB8 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-06-17 公開日 2018-04-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
5X7J	Crystal structure of thymidylate kinase from thermus thermophilus HB8 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-02-27 公開日 2018-03-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Insights into product release dynamics through structural analyses of thymidylate kinase. Int. J. Biol. Macromol., 123, 2019
5XAI	dTMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5 分子名称: PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE, Thymidylate kinase 著者 Biswas, A, Jeyakanthan, J, Sekar, K. 登録日 2017-03-13 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate FEBS J., 284, 2017
5XAK	Crystal structure (form II) of thymidylate kinase from Thermus thermophilus HB8 分子名称: CESIUM ION, CHLORIDE ION, Thymidylate kinase 著者 Chaudhary, S.K, Jeyakanthan, J, Sekar, K. 登録日 2017-03-14 公開日 2018-03-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
1MRN	CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH BISUBSTRATE INHIBITOR (TP5A) 分子名称: MAGNESIUM ION, P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE, SULFATE ION, ... 著者 Haouz, A, Vanheusden, V, Munier-Lehmann, H, Froeyen, M, Herdewijn, P, Van Calenbergh, S, Delarue, M. 登録日 2002-09-18 公開日 2003-01-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Enzymatic and structural analysis of inhibitors designed against Mycobacterium tuberculosis thymidylate kinase. New insights into the phosphoryl transfer mechanism. J.Biol.Chem., 278, 2003
5XB2	ADP-Mg-F-dTMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5 分子名称: ADENOSINE-5'-DIPHOSPHATE, FLUORIDE ION, MAGNESIUM ION, ... 著者 Biswas, A, Jeyakanthan, J, Sekar, K. 登録日 2017-03-15 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.161 Å) 主引用文献 Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate FEBS J., 284, 2017

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