PDB: 95 resultsInfo pagesStatus searchChemie searchBIRD

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7KAJ	Cryo-EM structure of the Sec complex from S. cerevisiae, wild-type, class with Sec62, conformation 2 (C2) Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-01-06 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KAT	Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore ring and Sec63 FN3 double mutant, class without Sec62 Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-01-06 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KAI	Cryo-EM structure of the Sec complex from S. cerevisiae, wild-type, class with Sec62, conformation 1 (C1) Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-01-06 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KAH	Cryo-EM structure of the Sec complex from S. cerevisiae, wild-type, class without Sec62 Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-02-03 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KAU	Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore ring and Sec63 FN3 double mutant, class with Sec62 Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-01-06 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KAP	Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore mutant, class with Sec62, conformation 1 (C1) Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-01-06 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KB5	Cryo-EM structure of the Sec complex from yeast, Sec63 FN3 and residues 210-216 mutated Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-01-06 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KAR	Cryo-EM structure of the Sec complex from S. cerevisiae, Sec63 FN3 mutant, class without Sec62 Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Itskanov, S, Park, E. Deposit date: 2020-10-01 Release date: 2021-01-06 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4 Å) Cite: Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7AFT	Cryo-EM structure of the signal sequence-engaged post-translational Sec translocon Descriptor: Mating factor alpha-1,Mating factor alpha-1, Protein translocation protein SEC63, Protein transport protein SBH1, ... Authors: Weng, T.-H, Beatrix, B, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R. Deposit date: 2020-09-20 Release date: 2020-12-02 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Architecture of the active post-translational Sec translocon. Embo J., 40, 2021
7JTK	Radial spoke 1 isolated from Chlamydomonas reinhardtii Descriptor: Cytochrome b5 heme-binding domain-containing protein, Dynein 8 kDa light chain, flagellar outer arm, ... Authors: Gui, M, Ma, M, Sze-Tu, E, Wang, X, Koh, F, Zhong, E, Berger, B, Davis, J, Dutcher, S, Zhang, R, Brown, A. Deposit date: 2020-08-17 Release date: 2020-12-16 Last modified: 2021-01-27 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structures of radial spokes and associated complexes important for ciliary motility. Nat.Struct.Mol.Biol., 28, 2021
6Z5N	DnaJB1 JD-GF Descriptor: DnaJ homolog subfamily B member 1 Authors: Avraham-Abayev, M, London, N, Rosenzweig, R. Deposit date: 2020-05-27 Release date: 2020-11-18 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: HSP40 proteins use class-specific regulation to drive HSP70 functional diversity. Nature, 587, 2020
6YXX	State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate Descriptor: 12S ribosomal RNA, 50S ribosomal protein L13, putative, ... Authors: Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N. Deposit date: 2020-05-04 Release date: 2020-10-14 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis. Mol.Cell, 79, 2020
6YXY	State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate Descriptor: 12S ribosomal RNA, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N. Deposit date: 2020-05-04 Release date: 2020-10-14 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis. Mol.Cell, 79, 2020
6WJG	PKA RIIbeta holoenzyme with DnaJB1-PKAc fusion in fibrolamellar hepatoceullar carcinoma Descriptor: DnaJ homolog subfamily B member 1, cAMP-dependent protein kinase catalytic subunit alpha fusion, cAMP-dependent protein kinase type II-beta regulatory subunit Authors: Lu, T.-W, Aoto, P.C, Weng, J.-H, Nielsen, C, Cash, J.N, Hall, J, Zhang, P, Simon, S.M, Cianfrocco, M.A, Taylor, S.S. Deposit date: 2020-04-13 Release date: 2020-12-02 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (6.2 Å) Cite: Structural analyses of the PKA RII beta holoenzyme containing the oncogenic DnaJB1-PKAc fusion protein reveal protomer asymmetry and fusion-induced allosteric perturbations in fibrolamellar hepatocellular carcinoma. Plos Biol., 18, 2020
6WJF	PKA RIIbeta holoenzyme with DnaJB1-PKAc fusion in fibrolamellar hepatoceullar carcinoma Descriptor: DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha fusion, cAMP-dependent protein kinase type II-beta regulatory subunit Authors: Lu, T.-W, Aoto, P.C, Weng, J.-H, Nielsen, C, Cash, J.N, Hall, J, Zhang, P, Simon, S.M, Cianfrocco, M.A, Taylor, S.S. Deposit date: 2020-04-13 Release date: 2020-12-02 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (7.5 Å) Cite: Structural analyses of the PKA RII beta holoenzyme containing the oncogenic DnaJB1-PKAc fusion protein reveal protomer asymmetry and fusion-induced allosteric perturbations in fibrolamellar hepatocellular carcinoma. Plos Biol., 18, 2020
6U3S	Solution NMR structure of the DNAJB6b deltaST variant (Aligned on the CTD domain) Descriptor: DnaJ homolog subfamily B member 6 Authors: Karamanos, T.K, Clore, G.M. Deposit date: 2019-08-22 Release date: 2019-10-09 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Unraveling the structure and dynamics of the human DNAJB6b chaperone by NMR reveals insights into Hsp40-mediated proteostasis. Proc.Natl.Acad.Sci.USA, 116, 2019
6U3R	Solution NMR structure of the DNAJB6b deltaST variant (Aligned on the J domain) Descriptor: DnaJ homolog subfamily B member 6,DnaJ homolog subfamily B member 6 Authors: Karamanos, T.K, Clore, G.M. Deposit date: 2019-08-22 Release date: 2019-10-09 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Unraveling the structure and dynamics of the human DNAJB6b chaperone by NMR reveals insights into Hsp40-mediated proteostasis. Proc.Natl.Acad.Sci.USA, 116, 2019
6PSI	Structural Basis for Client Recognition and Activity of Hsp40 Chaperones Descriptor: Alkaline phosphatase, Chaperone protein DnaJ 2 Authors: Jiang, Y, Rossi, P, Kalodimos, C.G. Deposit date: 2019-07-12 Release date: 2019-09-18 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural basis for client recognition and activity of Hsp40 chaperones. Science, 365, 2019
6RZY	Plasmodium falciparum PFA0660w Hsp40 co-chaperone J-domain Descriptor: Heat shock protein 40, type II Authors: Vakonakis, I, Day, J. Deposit date: 2019-06-13 Release date: 2019-10-02 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.379 Å) Cite: ThePlasmodium falciparumHsp70-x chaperone assists the heat stress response of the malaria parasite. Faseb J., 33, 2019
6JZB	Structural characterization of DnaJ from Streptococcus pneumonia presents a new tetramer of Hsp40 family Descriptor: Chaperone protein DnaJ, ZINC ION Authors: Zhu, M, Zhu, Z.L. Deposit date: 2019-04-30 Release date: 2020-11-04 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.754 Å) Cite: Structural insights into the formation of oligomeric state by a type I Hsp40 chaperone. Biochimie, 176, 2020
6JMG	Crystal structure of xRbj Descriptor: DnaJ homolog subfamily C member 27-A, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION Authors: Gao, Z.R, Qi, J.X. Deposit date: 2019-03-09 Release date: 2020-03-11 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.701 Å) Cite: Crystal structure of Rbj To Be Published
6ND1	CryoEM structure of the Sec Complex from yeast Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Wu, X, Cabanos, C, Rapoport, T.A. Deposit date: 2018-12-13 Release date: 2019-01-09 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structure of the post-translational protein translocation machinery of the ER membrane. Nature, 566, 2019
6IWS	Solution structure of the J-domain of Tid1, a Mitochondrial Hsp40/DnaJ Protein Descriptor: DnaJ homolog subfamily A member 3, mitochondrial Authors: Sim, D.W, Jo, K.S, Won, H.S, Kim, J.H. Deposit date: 2018-12-06 Release date: 2019-12-11 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of the J-domain of Tid1, a Mitochondrial Hsp40/DnaJ Protein To Be Published
6N3Q	Cryo-EM structure of the yeast Sec complex Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... Authors: Park, E, Itskanov, S. Deposit date: 2018-11-16 Release date: 2018-12-19 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.68 Å) Cite: Structure of the posttranslational Sec protein-translocation channel complex from yeast. Science, 363, 2019
6HIV	Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome Descriptor: 12S rRNA, 50S ribosomal protein L13, putative, ... Authors: Ramrath, D.J.F, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boerhringer, D, Schneider, A, Ban, N. Deposit date: 2018-08-31 Release date: 2018-10-03 Last modified: 2018-11-07 Method: ELECTRON MICROSCOPY (7.8 Å) Cite: Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes. Science, 362, 2018

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