Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8EN7
DownloadVisualize
BU of 8en7 by Molmil
Mouse apoferritin heavy chain without zinc determined using single-particle cryo-EM with Apollo camera.
分子名称: FE (III) ION, Ferritin heavy chain, N-terminally processed
著者Peng, R, Fu, X, Mendez, J.H, Randolph, P.H, Bammes, B, Stagg, S.M.
登録日2022-09-28
公開日2022-12-21
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (1.68 Å)
主引用文献Characterizing the resolution and throughput of the Apollo direct electron detector.
J Struct Biol X, 7, 2023
5O48
DownloadVisualize
BU of 5o48 by Molmil
P.vivax NMT with an aminomethylindazole inhibitor bound
分子名称: 1-[5-(4-fluoranyl-2-methyl-phenyl)-1~{H}-indazol-3-yl]-~{N},~{N}-dimethyl-methanamine, 2-oxopentadecyl-CoA, CHLORIDE ION, ...
著者Brannigan, J.A, Wilkinson, A.J.
登録日2017-05-26
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Fragment-derived inhibitors of human N-myristoyltransferase block capsid assembly and replication of the common cold virus.
Nat Chem, 10, 2018
4U85
DownloadVisualize
BU of 4u85 by Molmil
Human Pin1 with cysteine sulfinic acid 113
分子名称: POLYETHYLENE GLYCOL (N=34), Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Li, W, Zhang, Y.
登録日2014-08-01
公開日2015-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease.
Neurobiol.Dis., 76, 2015
4HPH
DownloadVisualize
BU of 4hph by Molmil
The crystal structure of isomaltulose synthase mutant E295Q from Erwinia rhapontici NX5 in complex with its natural substrate sucrose
分子名称: CALCIUM ION, GLYCEROL, Sucrose isomerase, ...
著者Xu, Z, Li, S, Xu, H, Zhou, J.
登録日2012-10-23
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Structural Basis of Erwinia rhapontici Isomaltulose Synthase
Plos One, 8, 2013
4HOW
DownloadVisualize
BU of 4how by Molmil
The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5
分子名称: CALCIUM ION, GLYCEROL, Sucrose isomerase
著者Xu, Z, Li, S, Xu, H, Zhou, J.
登録日2012-10-22
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Structural Basis of Erwinia rhapontici Isomaltulose Synthase
Plos One, 8, 2013
5O4V
DownloadVisualize
BU of 5o4v by Molmil
P.vivax NMT with aminomethylindazole and quinoline inhibitors bound
分子名称: 1-[5-(4-fluoranyl-2-methyl-phenyl)-1~{H}-indazol-3-yl]-~{N},~{N}-dimethyl-methanamine, 2-oxopentadecyl-CoA, CHLORIDE ION, ...
著者Brannigan, J.A, Wilkinson, A.J.
登録日2017-05-31
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fragment-derived inhibitors of human N-myristoyltransferase block capsid assembly and replication of the common cold virus.
Nat Chem, 10, 2018
3WJE
DownloadVisualize
BU of 3wje by Molmil
Crystal structure of mutant nitrobindin M75W/H76L/Q96C/M148L/H158L (NB6) from Arabidopsis thaliana
分子名称: UPF0678 fatty acid-binding protein-like protein At1g79260
著者Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WD0
DownloadVisualize
BU of 3wd0 by Molmil
Serratia marcescens Chitinase B, tetragonal form
分子名称: Chitinase B, DITHIANE DIOL, GLYCEROL, ...
著者Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
登録日2013-06-06
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
6RSN
DownloadVisualize
BU of 6rsn by Molmil
SOSEKI polymerising domain (SOK4 D85A mutant)
分子名称: SULFATE ION, UPSTREAM OF FLC-like protein (DUF966)
著者Fiedler, M, Bienz, M.
登録日2019-05-21
公開日2020-01-29
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献DIX Domain Polymerization Drives Assembly of Plant Cell Polarity Complexes.
Cell, 180, 2020
4B2K
DownloadVisualize
BU of 4b2k by Molmil
COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS
分子名称: CHLORIDE ION, DODECIN, MAGNESIUM ION, ...
著者Staudt, H, Hoesl, M, Dreuw, A, Serdjukow, S, Oesterhelt, D, Budisa, N, Wachtveitl, J, Grininger, M.
登録日2012-07-16
公開日2013-07-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Directed Manipulation of a Flavoprotein Photocycle.
Angew.Chem.Int.Ed.Engl., 52, 2013
3U43
DownloadVisualize
BU of 3u43 by Molmil
Crystal structure of the colicin E2 DNase-Im2 complex
分子名称: CALCIUM ION, Colicin-E2, Colicin-E2 immunity protein, ...
著者Wojdyla, J.A, Kleanthous, C.
登録日2011-10-07
公開日2012-03-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structure of the Ultra-High-Affinity Colicin E2 DNase-Im2 Complex.
J.Mol.Biol., 417, 2012
4P7T
DownloadVisualize
BU of 4p7t by Molmil
Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
分子名称: Polyhedral bodies
著者Pickersgill, R.W, Frank, S, Pang, A, Warren, M.J.
登録日2014-03-27
公開日2014-06-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
4I02
DownloadVisualize
BU of 4i02 by Molmil
structure of the mutant Catabolite gene activator protein V140A
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J.
登録日2012-11-16
公開日2013-10-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors.
Plos Biol., 11, 2013
5WBH
DownloadVisualize
BU of 5wbh by Molmil
Structure of the FRB domain of mTOR bound to a substrate recruitment peptide of S6K1
分子名称: Ribosomal protein S6 kinase beta-1, Serine/threonine-protein kinase mTOR
著者Pavletich, N.P, Yang, H.
登録日2017-06-29
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
4UDS
DownloadVisualize
BU of 4uds by Molmil
Crystal structure of MbdR regulator from Azoarcus sp. CIB
分子名称: MBDR REGULATOR
著者Liu, H, Liu, H.X, MacMahon, S.A, Juarez, J.F, Zamarro, M.T, Eberlein, C, Boll, M, Carmona, M, Diaz, E, Naismith, J.H.
登録日2014-12-11
公開日2014-12-24
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Unraveling the Specific Regulation of the Mbd Central Pathway for the Anaerobic Degradation of 3-Methylbenzoate.
J.Biol.Chem., 290, 2015
4X7I
DownloadVisualize
BU of 4x7i by Molmil
Crystal Structure of BACE with amino thiazine inhibitor LY2886721
分子名称: Beta-secretase 1, GLYCEROL, N-{3-[(4aS,7aS)-2-amino-4a,5-dihydro-4H-furo[3,4-d][1,3]thiazin-7a(7H)-yl]-4-fluorophenyl}-5-fluoropyridine-2-carboxamide
著者Timm, D.E.
登録日2014-12-09
公開日2014-12-24
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The Potent BACE1 Inhibitor LY2886721 Elicits Robust Central A beta Pharmacodynamic Responses in Mice, Dogs, and Humans.
J.Neurosci., 35, 2015
4U84
DownloadVisualize
BU of 4u84 by Molmil
Human Pin1 with S-hydroxyl-cysteine 113
分子名称: POLYETHYLENE GLYCOL (N=34), Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Li, W, Zhang, Y.
登録日2014-08-01
公開日2015-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease.
Neurobiol.Dis., 76, 2015
7P9T
DownloadVisualize
BU of 7p9t by Molmil
Crystal structure of CD73 in complex with dCMP in the open form
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, 5'-nucleotidase, CALCIUM ION, ...
著者Scaletti, E.R, Strater, N.
登録日2021-07-27
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
4E04
DownloadVisualize
BU of 4e04 by Molmil
RpBphP2 chromophore-binding domain crystallized by homologue-directed mutagenesis.
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
著者Bellini, D, Papiz, M.Z.
登録日2012-03-02
公開日2012-07-25
最終更新日2013-01-23
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Dimerization properties of the RpBphP2 chromophore-binding domain crystallized by homologue-directed mutagenesis.
Acta Crystallogr.,Sect.D, 68, 2012
4FN3
DownloadVisualize
BU of 4fn3 by Molmil
Crystal Structure of an S52A mutant of the Restriction-Modification Controller Protein C.Esp1396I
分子名称: Regulatory protein, SULFATE ION
著者Martin, R.N.A, McGeehan, J.E, Kneale, G.G.
登録日2012-06-19
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I.
Plos One, 9, 2014
7L1X
DownloadVisualize
BU of 7l1x by Molmil
Structure of human CK2 alpha kinase (catalytic subunit) with the inhibitor 108600.
分子名称: (2~{Z})-6-[[2,6-bis(chloranyl)phenyl]methylsulfonyl]-2-[[4-oxidanyl-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]methylidene]-4~{H}-1,4-benzothiazin-3-one, Casein kinase II subunit alpha, GLYCEROL, ...
著者Rechkoblit, O, Aggarwal, A.K.
登録日2020-12-15
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Simultaneous CK2/TNIK/DYRK1 inhibition by 108600 suppresses triple negative breast cancer stem cells and chemotherapy-resistant disease.
Nat Commun, 12, 2021
6YCE
DownloadVisualize
BU of 6yce by Molmil
Structure the bromelain protease from Ananas comosus with a thiomethylated active cysteine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FBSB, ISOPROPYL ALCOHOL, ...
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-03-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
3W8Z
DownloadVisualize
BU of 3w8z by Molmil
The complex structure of EncM with hydroxytetraketide
分子名称: (7S)-7-hydroxy-1-phenyloctane-1,3,5-trione, FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
著者Teufel, R, Miyanaga, A, Stull, F, Michaudel, Q, Louie, G, Noel, J.P, Baran, P.S, Palfey, B, Moore, B.S.
登録日2013-03-22
公開日2013-10-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
Nature, 503, 2013
4JJ0
DownloadVisualize
BU of 4jj0 by Molmil
Crystal structure of MamP
分子名称: GLYCEROL, HEME C, MamP
著者Siponen, M, Pignol, D, Arnoux, P.
登録日2013-03-07
公開日2013-10-09
最終更新日2013-11-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insight into magnetochrome-mediated magnetite biomineralization.
Nature, 502, 2013
4FFR
DownloadVisualize
BU of 4ffr by Molmil
SeMet-labeled PylC (remote)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PylC
著者Quitterer, F, List, A, Beck, P, Bacher, A, Groll, M.
登録日2012-06-01
公開日2012-09-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biosynthesis of the 22nd genetically encoded amino acid pyrrolysine: structure and reaction mechanism of PylC at 1.5A resolution.
J.Mol.Biol., 424, 2012

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon