Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OX8
DownloadVisualize
BU of 5ox8 by Molmil
Structure of Enhanced Cyan Fluorescent Protein at pH 5.0
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Gotthard, G, von Stetten, D, Clavel, D, Noirclerc-Savoye, M, Royant, A.
Deposit date:2017-09-06
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Chromophore Isomer Stabilization Is Critical to the Efficient Fluorescence of Cyan Fluorescent Proteins.
Biochemistry, 56, 2017
1RM9
DownloadVisualize
BU of 1rm9 by Molmil
Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
Descriptor: avermectin-sensitive chloride channel GluCl beta/cyan fluorescent protein fusion
Authors:Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
Deposit date:2003-11-27
Release date:2004-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
5OXB
DownloadVisualize
BU of 5oxb by Molmil
Structure of blue-light irradiated Cerulean
Descriptor: Green fluorescent protein
Authors:Gotthard, G, von Stetten, D, Clavel, D, Noirclerc-Savoye, M, Royant, A.
Deposit date:2017-09-06
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Chromophore Isomer Stabilization Is Critical to the Efficient Fluorescence of Cyan Fluorescent Proteins.
Biochemistry, 56, 2017
6L27
DownloadVisualize
BU of 6l27 by Molmil
X-ray crystal structure of the mutant green fluorescent protein
Descriptor: Green fluorescent protein
Authors:Adachi, M, Shimizu, R, Shibazaki, C, Kagotani, Y, Ostermann, A, Schrader, T.E.
Deposit date:2019-10-02
Release date:2020-04-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.77 Å)
Cite:Direct Observation of the Protonation States in the Mutant Green Fluorescent Protein.
J Phys Chem Lett, 11, 2020
8T6L
DownloadVisualize
BU of 8t6l by Molmil
Cryo-EM structure of rat cardiac sodium channel NaV1.5 with batrachotoxin analog BTX-B
Descriptor: (1R)-1-[(5aR,7aR,9R,11aS,11bS,12R,13aR)-9,12-dihydroxy-2,11a-dimethyl-1,2,3,4,7a,8,9,10,11,11a,12,13-dodecahydro-7H-9,11b-epoxy-13a,5a-prop[1]enophenanthro[2,1-f][1,4]oxazepin-14-yl]ethyl benzoate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, ...
Authors:Tonggu, L, Wisedchaisri, G, Gamal El-Din, T.M, Zheng, N, Catterall, W.A.
Deposit date:2023-06-16
Release date:2024-03-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Dual receptor-sites reveal the structural basis for hyperactivation of sodium channels by poison-dart toxin batrachotoxin.
Nat Commun, 15, 2024
4LQT
DownloadVisualize
BU of 4lqt by Molmil
1.10A resolution crystal structure of a superfolder green fluorescent protein (W57A) mutant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein
Authors:Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J.
Deposit date:2013-07-19
Release date:2013-12-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
J.Am.Chem.Soc., 135, 2013
4LQU
DownloadVisualize
BU of 4lqu by Molmil
1.60A resolution crystal structure of a superfolder green fluorescent protein (W57G) mutant
Descriptor: Green fluorescent protein
Authors:Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J.
Deposit date:2013-07-19
Release date:2013-12-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
J.Am.Chem.Soc., 135, 2013
3V3D
DownloadVisualize
BU of 3v3d by Molmil
Crystal Structure of an eYFP single mutant
Descriptor: SULFATE ION, Yellow fluorescent protein
Authors:Ngan, N.B, Van Hecke, K, Van Meervelt, L.
Deposit date:2011-12-13
Release date:2012-12-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Improving the second-order nonlinear optical response of fluorescent proteins: the symmetry argument.
J.Am.Chem.Soc., 135, 2013
1BFP
DownloadVisualize
BU of 1bfp by Molmil
BLUE VARIANT OF GREEN FLUORESCENT PROTEIN
Descriptor: BLUE FLUORESCENT PROTEIN
Authors:Wachter, R.M, Remington, S.J.
Deposit date:1997-04-09
Release date:1997-07-07
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and photodynamic behavior of the blue emission variant Y66H/Y145F of green fluorescent protein.
Biochemistry, 36, 1997
5LEL
DownloadVisualize
BU of 5lel by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DD_Off7_10_3G124 in complex with Maltose-binding Protein and Green Fluorescent Protein
Descriptor: DD_Off7_10_3G124, Green fluorescent protein, Maltose-binding periplasmic protein
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-30
Release date:2017-11-15
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LEM
DownloadVisualize
BU of 5lem by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DD_Off7_11_3G124 in complex with Maltose-binding Protein and Green Fluorescent Protein
Descriptor: DD_Off7_11_3G124, Green fluorescent protein, Maltose-binding periplasmic protein
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-30
Release date:2017-08-02
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
3P28
DownloadVisualize
BU of 3p28 by Molmil
Structure of a Circular Permutant of Green Fluorescent Protein
Descriptor: Green fluorescent protein
Authors:Melief, E.H, Kim, H, Kim, T.S, Wachter, R.M, Tonge, P.J.
Deposit date:2010-10-01
Release date:2011-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Construction and Characterization of a Stable Circular Permutant of Green Fluorescent Protein
To be Published
6AA2
DownloadVisualize
BU of 6aa2 by Molmil
X-ray structure of ReQy1 (oxidized form)
Descriptor: Green fluorescent protein
Authors:Sugiura, K, Yasuda, A, Tabushi, N, Tanaka, H, Kurisu, G, Hisabori, T.
Deposit date:2018-07-17
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multicolor redox sensor proteins can visualize redox changes in various compartments of the living cell.
Biochim Biophys Acta Gen Subj, 1863, 2019
6AA6
DownloadVisualize
BU of 6aa6 by Molmil
X-ray structure of ReQy1 (reduced form)
Descriptor: Green fluorescent protein
Authors:Kurisu, G, Yasuda, A, Tabushi, N, Tanaka, H.
Deposit date:2018-07-17
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Multicolor redox sensor proteins can visualize redox changes in various compartments of the living cell.
Biochim Biophys Acta Gen Subj, 1863, 2019
4H48
DownloadVisualize
BU of 4h48 by Molmil
1.45 angstrom CyPet Structure at pH7.0
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein
Authors:Hu, X.-J, Liu, R.
Deposit date:2012-09-17
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure insight of the fluorescent state of CyPet
To be Published
3CFF
DownloadVisualize
BU of 3cff by Molmil
Photoswitchable red fluorescent protein psRFP, on-state
Descriptor: GFP-like photoswitchable fluorescent protein
Authors:Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published
4H47
DownloadVisualize
BU of 4h47 by Molmil
1.9 angstrom CyPet structure at pH5.2
Descriptor: ACETATE ION, Green fluorescent protein, SULFATE ION
Authors:Hu, X.-J, Liu, R.
Deposit date:2012-09-17
Release date:2013-09-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights of the fluorescent states of CyPet
To be Published
6T39
DownloadVisualize
BU of 6t39 by Molmil
Crystal structure of rsEGFP2 in its off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
6T3A
DownloadVisualize
BU of 6t3a by Molmil
Difference-refined structure of rsEGFP2 10 ns following 400-nm laser irradiation of the off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
6UN4
DownloadVisualize
BU of 6un4 by Molmil
Crystal structure of rsEGFP2, Y67(3-ClY), Y107(3-ClY)
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Lin, C.-Y, Romei, M.G, Boxer, S.G, Chang, J.
Deposit date:2019-10-10
Release date:2020-07-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.
J Photochem Photobiol A Chem, 401, 2020
8J0J
DownloadVisualize
BU of 8j0j by Molmil
AtSLAC1 8D mutant in closed state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein
Authors:Lee, Y, Lee, S.
Deposit date:2023-04-11
Release date:2023-11-22
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
8J1E
DownloadVisualize
BU of 8j1e by Molmil
AtSLAC1 in open state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein
Authors:Lee, Y, Lee, S.
Deposit date:2023-04-12
Release date:2023-11-22
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
6UZ3
DownloadVisualize
BU of 6uz3 by Molmil
Cardiac sodium channel
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jiang, D, Shi, H, Tonggu, L, Lenaeus, M.J, Zheng, N, Catterall, W.A.
Deposit date:2019-11-14
Release date:2020-01-01
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the Cardiac Sodium Channel.
Cell, 180, 2020
6UZ0
DownloadVisualize
BU of 6uz0 by Molmil
Cardiac sodium channel with flecainide
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jiang, D, Shi, H, Tonggu, L, Lenaeus, M.J, Zheng, N, Catterall, W.A.
Deposit date:2019-11-14
Release date:2020-01-01
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structure of the Cardiac Sodium Channel.
Cell, 180, 2020
8OTS
DownloadVisualize
BU of 8ots by Molmil
OCT4 and MYC-MAX co-bound to a nucleosome
Descriptor: DNA (127-MER), Green fluorescent protein,POU domain, class 5, ...
Authors:Michael, A.K, Stoos, L, Kempf, G, Cavadini, S, Thoma, N.
Deposit date:2023-04-21
Release date:2023-05-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023

219869

数据于2024-05-15公开中

PDB statisticsPDBj update infoContact PDBjnumon