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8Y88
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BU of 8y88 by Molmil
Structure of HCoV-HKU1C spike in the functionally anchored-2up conformation with 2TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8ZSS
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BU of 8zss by Molmil
Cryo-EM structure of the RO5263397-bound hTAAR1-Gs complex
Descriptor: (4~{S})-4-(3-fluoranyl-2-methyl-phenyl)-1,3-oxazolidin-2-amine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Jiang, K.X, Zheng, Y, Xu, F.
Deposit date:2024-06-05
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:The versatile binding landscape of the TAAR1 pocket for LSD and other antipsychotic drug molecules.
Cell Rep, 43, 2024
8Y4J
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BU of 8y4j by Molmil
Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to D-KDP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-2-keto-3-deoxypentonate, DI(HYDROXYETHYL)ETHER, ...
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8ZHK
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BU of 8zhk by Molmil
SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C3 symmetry)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H18 Fab, ...
Authors:Yan, Q, Gao, X, Liu, B, Hou, R, He, P, Li, Z, Chen, Q, Wang, J, He, J, Chen, L, Zhao, J, Xiong, X.
Deposit date:2024-05-11
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Antibodies utilizing VL6-57 light chains target a convergent cryptic epitope on SARS-CoV-2 spike protein helping to drive the genesis of Omicron variants
To Be Published
8YBR
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BU of 8ybr by Molmil
Choline transporter BetT
Descriptor: BCCT family transporter
Authors:Yang, T.J, Nian, Y.W, Lin, H.J, Li, J, Zhang, J.R, Fan, M.R.
Deposit date:2024-02-16
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Structure and mechanism of the osmoregulated choline transporter BetT.
Sci Adv, 10, 2024
9EOR
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BU of 9eor by Molmil
SARS-CoV2 major protease in complex with a covalent inhibitor SLL12.
Descriptor: 3C-like proteinase nsp5, Inhibitor SLL12, POTASSIUM ION
Authors:Moche, M, Lennerstrand, J, Nyman, T, Strandback, E, Akaberi, D.
Deposit date:2024-03-15
Release date:2024-09-04
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
Antimicrob.Agents Chemother., 2024
9EOJ
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BU of 9eoj by Molmil
Vertebrate microtubule-capping gamma-tubulin ring complex
Descriptor: Gamma-tubulin complex component, Gamma-tubulin complex component 3 homolog, Gamma-tubulin complex component 6, ...
Authors:Vermeulen, B.J.A, Pfeffer, S.
Deposit date:2024-03-15
Release date:2024-04-17
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (17 Å)
Cite:gamma-TuRC asymmetry induces local protofilament mismatch at the RanGTP-stimulated microtubule minus end.
Embo J., 43, 2024
8Y7X
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BU of 8y7x by Molmil
Structure of HCoV-HKU1A spike in the functionally anchored-3up conformation with 3TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-05
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
9BGO
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BU of 9bgo by Molmil
Pseudomonas phage DEV gp72 ejection protein (pre-ejection conformation)
Descriptor: gp72
Authors:Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
To Be Published
9BNQ
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BU of 9bnq by Molmil
N-(4-(isothiocyanatomethyl)phenyl)methanesulfonamide complexed with Macrophage Migration Inhibitory Factor
Descriptor: ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor, N-{[4-(methanesulfonamido)phenyl]methyl}methanethioamide, ...
Authors:Fellner, M, Rutledge, M.T, Putha, L, Kok, L.K, Gamble, A.B, Wilbanks, S.M, Vernall, A.J, Tyndall, J.D.A.
Deposit date:2024-05-02
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Covalent isothiocyanate inhibitors of macrophage migration inhibitory factor as potential colorectal cancer treatments.
Chemmedchem, 2024
9FFF
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BU of 9fff by Molmil
dsDNA-FANCD2-FANCI complex
Descriptor: DNA (32-MER), DNA (33-MER), Fanconi anemia complementation group I, ...
Authors:Alcon, P, Passmore, L.A.
Deposit date:2024-05-23
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:dsDNA-FANCD2-FANCI complex
To Be Published
8ZHD
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BU of 8zhd by Molmil
SARS-CoV-2 spike trimer (6P) in complex with two R1-26 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-26 Fab, ...
Authors:Yan, Q, Gao, X, Liu, B, Hou, R, He, P, Li, Z, Chen, Q, Wang, J, He, J, Chen, L, Zhao, J, Xiong, X.
Deposit date:2024-05-10
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Antibodies utilizing VL6-57 light chains target a convergent cryptic epitope on SARS-CoV-2 spike protein helping to drive the genesis of Omicron variants
To Be Published
9B8P
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BU of 9b8p by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, V1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit D, H(+)-transporting two-sector ATPase, ...
Authors:Coupland, E.M, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-07-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BNH
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BU of 9bnh by Molmil
X-ray Crystal Structure of Cu-TZ4H tryptophan Zipper Metallo-Peptide
Descriptor: ACETIC ACID, AMMONIA, COPPER (II) ION, ...
Authors:Dang, V.T, Nguyen, A.
Deposit date:2024-05-02
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Crystallography reveals metal-triggered restructuring of beta-hairpins.
Chemistry, 2024
9ER3
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BU of 9er3 by Molmil
Cyanide dihydratase from Bacillus pumilus C1 E155R variant with altered helical twist.
Descriptor: Cyanide dihydratase
Authors:Dlamini, L.S, Woodward, J.D, Sewell, B.T.
Deposit date:2024-03-22
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cyanide dihydratase from Bacillus pumilus C1 E155R variant with altered helical twist
To Be Published
8ZHL
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BU of 8zhl by Molmil
SARS-CoV-2 spike trimer (6P) in complex with two H18 and two R1-32 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H18 Fab, ...
Authors:Yan, Q, Gao, X, Liu, B, Hou, R, He, P, Li, Z, Chen, Q, Wang, J, He, J, Chen, L, Zhao, J, Xiong, X.
Deposit date:2024-05-11
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Antibodies utilizing VL6-57 light chains target a convergent cryptic epitope on SARS-CoV-2 spike protein helping to drive the genesis of Omicron variants
To Be Published
9BGM
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BU of 9bgm by Molmil
Pseudomonas phage DEV neck and tail (portal, head-to-tail and tail tube proteins)
Descriptor: gp75 tail tube, gp80 portal protein, gp83 head-to-tail
Authors:Iglesias, S.M, Hou, C.-F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor
To Be Published
8Y7Y
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BU of 8y7y by Molmil
Local structure of HCoV-HKU1A spike in complex with TMPRSS2 and glycan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, H.F, Zhang, X, Lu, Y, Liu, X, Sun, L, Yang, H.T.
Deposit date:2024-02-05
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
9CA1
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BU of 9ca1 by Molmil
Human TOP3B-TDRD3 core complex in DNA religation state
Descriptor: DNA (5'-D(*AP*TP*T)-3'), DNA (5'-D(P*TP*AP*CP*TP*AP*AP*A)-3'), DNA topoisomerase 3-beta-1, ...
Authors:Yang, X, Chen, X, Yang, W, Pommier, Y.
Deposit date:2024-06-16
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural Insights into human Topoisomerase 3-beta DNA and RNA catalytic cycles and topo-gate dynamics
To Be Published
8Y85
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BU of 8y85 by Molmil
Human AE3 with NaHCO3- and DIDS
Descriptor: 2,2'-ethane-1,2-diylbis{5-[(sulfanylmethyl)amino]benzenesulfonic acid}, Anion exchange protein 3, BICARBONATE ION
Authors:Jian, L, Zhang, Q, Yao, D, Wang, Q, Xia, Y, Qin, A, Cao, Y.
Deposit date:2024-02-05
Release date:2024-07-31
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:The structural insight into the functional modulation of human anion exchanger 3.
Nat Commun, 15, 2024
8YRP
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BU of 8yrp by Molmil
SARS-CoV-2 Delta Spike in complex with JM-1A
Descriptor: JM-1A Heavy Chain, JM-1A Light Chain, Spike glycoprotein
Authors:Nguyen, V.H.T, Chen, X.
Deposit date:2024-03-21
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8ZR5
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BU of 8zr5 by Molmil
Cryo-EM Structure of GPR119-Gs-Firuglipel complex
Descriptor: 4-[5-[(1~{R})-1-(4-cyclopropylcarbonylphenoxy)propyl]-1,2,4-oxadiazol-3-yl]-2-fluoranyl-~{N}-[(2~{R})-1-oxidanylpropan-2-yl]benzamide, Glucose-dependent insulinotropic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Wong, T.S, Zeng, Z.C, Xiong, T.T, Gan, S.Y, Qiu, C, Du, Y.
Deposit date:2024-06-04
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Cryo-EM structure of GPR119-Gs complex
To Be Published
8Y8D
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BU of 8y8d by Molmil
Structure of HCoV-HKU1C spike in the inactive-1up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8YEK
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BU of 8yek by Molmil
Cryo-EM structure of the channelrhodopsin GtCCR2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, GtCCR2, RETINAL
Authors:Tanaka, T, Iida, W, Sano, F.K, Oda, K, Shihoya, W, Nureki, O.
Deposit date:2024-02-22
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:The high-light-sensitivity mechanism and optogenetic properties of the bacteriorhodopsin-like channelrhodopsin GtCCR4
Mol.Cell, 2024
9EQ7
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BU of 9eq7 by Molmil
Halobacterium salinarum archaellum filament
Descriptor: 2-O-sulfo-beta-D-glucopyranuronic acid-(1-4)-3-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-beta-D-glucopyranuronic acid-(1-4)-beta-D-glucopyranose, Archaellin
Authors:Grossman-Haham, I, Shahar, A.
Deposit date:2024-03-21
Release date:2024-07-17
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Perturbed N-glycosylation of Halobacterium salinarum archaellum filaments leads to filament bundling and compromised cell motility.
Nat Commun, 15, 2024

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PDB entries from 2024-09-11

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