Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CX8
DownloadVisualize
BU of 1cx8 by Molmil
CRYSTAL STRUCTURE OF THE ECTODOMAIN OF HUMAN TRANSFERRIN RECEPTOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SAMARIUM (III) ION, TRANSFERRIN RECEPTOR PROTEIN
Authors:Lawrence, C.M, Ray, S, Babyonyshev, M, Galluser, R, Borhani, D, Harrison, S.C.
Deposit date:1999-08-28
Release date:1999-09-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the ectodomain of human transferrin receptor.
Science, 286, 1999
1D0Z
DownloadVisualize
BU of 1d0z by Molmil
DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH P-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE.
Descriptor: MAGNESIUM ION, MYOSIN, P-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE
Authors:Gulick, A.M, Bauer, C.B, Thoden, J.B, Pate, E, Yount, R.G, Rayment, I.
Deposit date:1999-09-15
Release date:2000-01-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structures of the Dictyostelium discoideum myosin motor domain with six non-nucleotide analogs.
J.Biol.Chem., 275, 2000
1D2A
DownloadVisualize
BU of 1d2a by Molmil
CRYSTAL STRUCTURE OF A YEAST LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE (LTP1) COMPLEXED WITH THE ACTIVATOR ADENINE
Descriptor: ADENINE, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Wang, S, Stauffacher, C.V, Van Etten, R.L.
Deposit date:1999-09-22
Release date:2000-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and mechanistic basis for the activation of a low-molecular weight protein tyrosine phosphatase by adenine.
Biochemistry, 39, 2000
5KQE
DownloadVisualize
BU of 5kqe by Molmil
Solution structure of P2a-J2a/b-P2b of medaka telomerase RNA
Descriptor: Telomerase RNA P2ab
Authors:Wang, Y, Feigon, J.
Deposit date:2016-07-06
Release date:2016-08-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural conservation in the template/pseudoknot domain of vertebrate telomerase RNA from teleost fish to human.
Proc.Natl.Acad.Sci.USA, 113, 2016
1D2W
DownloadVisualize
BU of 1d2w by Molmil
N-TERMINAL DOMAIN CORE METHIONINE MUTATION
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME
Authors:Gassner, N.C, Matthews, B.W.
Deposit date:1999-09-28
Release date:1999-10-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Use of differentially substituted selenomethionine proteins in X-ray structure determination.
Acta Crystallogr.,Sect.D, 55, 1999
5KIZ
DownloadVisualize
BU of 5kiz by Molmil
Solution Structure of a repacked version of HIF-2 alpha PAS-B
Descriptor: Endothelial PAS domain-containing protein 1
Authors:Correa, F, Key, J, Kuhlman, B, Gardner, K.H.
Deposit date:2016-06-17
Release date:2016-08-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Computational Repacking of HIF-2 alpha Cavity Replaces Water-Based Stabilized Core.
Structure, 24, 2016
1QX9
DownloadVisualize
BU of 1qx9 by Molmil
Structure of a cyclic indolicidin peptide derivative with higher charge
Descriptor: INDOLICIDIN DERIVATIVE
Authors:Rozek, A, Powers, J.P, Friedrich, C.L, Hancock, R.E.
Deposit date:2003-09-04
Release date:2003-12-30
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:Structure-based design of an indolicidin peptide analogue with increased protease stability
Biochemistry, 42, 2003
1CIX
DownloadVisualize
BU of 1cix by Molmil
THREE-DIMENSIONAL STRUCTURE OF ANTIMICROBIAL PEPTIDE TACHYSTATIN A ISOLATED FROM HORSESHOE CRAB
Descriptor: PROTEIN (TACHYSTATIN A)
Authors:Fujitani, N, Kawabata, S, Osaki, T, Kumaki, Y, Demura, M, Nitta, K, Kawano, K.
Deposit date:1999-04-06
Release date:2002-05-01
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of the antimicrobial peptide tachystatin A.
J.Biol.Chem., 277, 2002
3D7D
DownloadVisualize
BU of 3d7d by Molmil
A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCFBD, a urea-based inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Lubkowski, J, Barinka, C.
Deposit date:2008-05-21
Release date:2008-12-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Interactions between Human Glutamate Carboxypeptidase II and Urea-Based Inhibitors: Structural Characterization
J.Med.Chem., 51, 2008
5KQJ
DownloadVisualize
BU of 5kqj by Molmil
Solution Structure of Antibiotic-Resistance Factor ANT(2'')-Ia Reveals Substrate-Regulated Conformation Dynamics
Descriptor: 2''-aminoglycoside nucleotidyltransferase
Authors:Bacot-Davis, V.R, Berghuis, A.M.
Deposit date:2016-07-06
Release date:2017-07-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Effect of solvent and protein dynamics in ligand recognition and inhibition of aminoglycoside adenyltransferase 2′′-Ia.
Protein Sci., 26, 2017
5KVN
DownloadVisualize
BU of 5kvn by Molmil
NMR Solution Structure of Designed Peptide NC_HEE_D1
Descriptor: Designed peptide NC_HEE_D1
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2016-07-14
Release date:2016-09-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Accurate de novo design of hyperstable constrained peptides.
Nature, 538, 2016
5L85
DownloadVisualize
BU of 5l85 by Molmil
Solution structure of the complex between human ZNHIT3 and NUFIP1 proteins
Descriptor: Nuclear fragile X mental retardation-interacting protein 1, Zinc finger HIT domain-containing protein 3
Authors:Quinternet, M, Chagot, M.-E, Manival, X.
Deposit date:2016-06-07
Release date:2016-08-31
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural Features of the Box C/D snoRNP Pre-assembly Process Are Conserved through Species.
Structure, 24, 2016
5KQB
DownloadVisualize
BU of 5kqb by Molmil
Identification and structural characterization of LytU
Descriptor: Peptidase M23, ZINC ION
Authors:Raulinaitis, V, Tossavainen, H, Permi, P.
Deposit date:2016-07-06
Release date:2017-08-02
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Identification and structural characterization of LytU, a unique peptidoglycan endopeptidase from the lysostaphin family.
Sci Rep, 7, 2017
5KQC
DownloadVisualize
BU of 5kqc by Molmil
Identification and structural characterization of LytU
Descriptor: Peptidase M23, ZINC ION
Authors:Tossavainen, H, Raulinaitis, V, Permi, P.
Deposit date:2016-07-06
Release date:2017-08-02
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Identification and structural characterization of LytU, a unique peptidoglycan endopeptidase from the lysostaphin family.
Sci Rep, 7, 2017
7LF2
DownloadVisualize
BU of 7lf2 by Molmil
Trimeric human Arginase 1 in complex with mAb4
Descriptor: Arginase-1, MANGANESE (II) ION, mAb4 monoclonal antibody heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
1CK1
DownloadVisualize
BU of 1ck1 by Molmil
STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C3
Descriptor: PROTEIN (ENTEROTOXIN TYPE C-3), ZINC ION
Authors:Chi, Y.-I, Bohach, G.A, Stauffacher, C.V.
Deposit date:1999-04-26
Release date:2002-07-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Zinc-mediated dimerization and its effect on activity and conformation of staphylococcal enterotoxin type C.
J.Biol.Chem., 277, 2002
7LF1
DownloadVisualize
BU of 7lf1 by Molmil
Trimeric human Arginase 1 in complex with mAb3
Descriptor: Arginase-1, MANGANESE (II) ION, mAb3 heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
1CFM
DownloadVisualize
BU of 1cfm by Molmil
CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII
Descriptor: CYTOCHROME F, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chi, Y.I, Huang, L.S, Zhang, Z, Fernandez-Velasco, J.G, Malkin, R, Berry, E.A.
Deposit date:1998-09-18
Release date:1999-04-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of a truncated form of cytochrome f from chlamydomonas reinhardtii.
Biochemistry, 39, 2000
1D1S
DownloadVisualize
BU of 1d1s by Molmil
WILD-TYPE HUMAN SIGMA (CLASS IV) ALCOHOL DEHYDROGENASE
Descriptor: ACETATE ION, ALCOHOL DEHYDROGENASE CLASS IV SIGMA CHAIN, CACODYLATE ION, ...
Authors:Xie, P.T, Hurley, T.D.
Deposit date:1999-09-21
Release date:1999-09-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Methionine-141 directly influences the binding of 4-methylpyrazole in human sigma sigma alcohol dehydrogenase.
Protein Sci., 8, 1999
1CK3
DownloadVisualize
BU of 1ck3 by Molmil
N276D MUTANT OF ESCHERICHIA COLI TEM-1 BETA-LACTAMASE
Descriptor: BETA-LACTAMASE
Authors:Swaren, P, Maveyraud, L, Samama, J.P.
Deposit date:1999-04-27
Release date:1999-08-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:X-ray structure of the Asn276Asp variant of the Escherichia coli TEM-1 beta-lactamase: direct observation of electrostatic modulation in resistance to inactivation by clavulanic acid.
Biochemistry, 38, 1999
1CN0
DownloadVisualize
BU of 1cn0 by Molmil
CRYSTAL STRUCTURE OF D(ACCCT)
Descriptor: DNA (5'-D(*AP*CP*CP*CP*T)-3')
Authors:Weil, J, Min, T, Cheng, Y, Wang, S, Sutherland, C, Sinha, N, Kang, C.
Deposit date:1999-05-24
Release date:2000-05-24
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Stabilization of the i-motif by intramolecular adenine-adenine-thymine base triple in the structure of d(ACCCT).
Acta Crystallogr.,Sect.D, 55, 1999
1LKD
DownloadVisualize
BU of 1lkd by Molmil
CRYSTAL STRUCTURE OF 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE (DHBD) COMPLEXED WITH 2',6'-DICL DIHYDROXYBIPHENYL (DHB)
Descriptor: 2',6'-DICHLORO-BIPHENYL-2,6-DIOL, BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE, FE (II) ION, ...
Authors:Dai, S, Bolin, J.T.
Deposit date:2002-04-24
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and analysis of a bottleneck in PCB biodegradation
Nat.Struct.Biol., 9, 2002
1ZRV
DownloadVisualize
BU of 1zrv by Molmil
solution structure of spinigerin in H20/TFE 50%
Descriptor: spinigerin
Authors:Landon, C, Meudal, H, Boulanger, N, Bulet, P, Vovelle, F.
Deposit date:2005-05-23
Release date:2005-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an alpha-helical conformation.
Biopolymers, 81, 2006
5VZM
DownloadVisualize
BU of 5vzm by Molmil
Solution NMR structure of human Rev1 (932-1039) in complex with ubiquitin
Descriptor: DNA repair protein REV1, Ubiquitin
Authors:Cui, G, Botuyan, M.V, Mer, G.
Deposit date:2017-05-29
Release date:2018-05-23
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:Structural Basis for the Interaction of Mutasome Assembly Factor REV1 with Ubiquitin.
J. Mol. Biol., 430, 2018
1PZR
DownloadVisualize
BU of 1pzr by Molmil
Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS2 and DEBS3: the B domain
Descriptor: Erythronolide synthase
Authors:Broadhurst, R.W, Nietlispach, D, Wheatcroft, M.P, Leadlay, P.F, Weissman, K.J.
Deposit date:2003-07-14
Release date:2004-02-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of docking domains in modular polyketide synthases.
Chem.Biol., 10, 2003

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon