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7T1I
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BU of 7t1i by Molmil
Crystal structure of CAB1 Pantothenate Kinase from Saccharomyces cerevisiae in complex with compound YU385597
Descriptor: (8S)-2-{[(4-tert-butylphenyl)methyl]amino}-5-[(piperidin-1-yl)methyl][1,2,4]triazolo[1,5-a]pyrimidin-7(6H)-one, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Gihaz, S, Ben Mamoun, C.
Deposit date:2021-12-02
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-resolution crystal structure and chemical screening reveal pantothenate kinase as a new target for antifungal development.
Structure, 30, 2022
8ACS
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BU of 8acs by Molmil
Crystal structure of FMO from Janthinobacterium svalbardensis
Descriptor: DI(HYDROXYETHYL)ETHER, FAD-dependent oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Polidori, N, Galuska, P, Gruber, K.
Deposit date:2022-07-06
Release date:2022-09-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Cold-Active Flavin-Dependent Monooxygenase from Janthinobacterium svalbardensis Unlocks Applications of Baeyer-Villiger Monooxygenases at Low Temperature.
Acs Catalysis, 13, 2023
7AYC
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BU of 7ayc by Molmil
Crystal Structure of human mitochondrial 2-Enoyl Thioester Reductase (MECR) with single mutation G165Q
Descriptor: CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase, mitochondrial
Authors:Rahman, M.T, Koski, M.K, Autio, K.J, Kastaniotis, A.J, Wierenga, R.K, Hiltunen, J.K.
Deposit date:2020-11-12
Release date:2022-06-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:An engineered variant of MECR reductase reveals indispensability of long-chain acyl-ACPs for mitochondrial respiration.
Nat Commun, 14, 2023
6O94
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BU of 6o94 by Molmil
Structure of the IRAK4 kinase domain with compound 17
Descriptor: CALCIUM ION, Interleukin-1 receptor-associated kinase 4, N-{5-[4-(hydroxymethyl)piperidin-1-yl]-1-methyl-2-(morpholin-4-yl)-1H-benzimidazol-6-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide
Authors:Yu, C, Drobnick, J, Bryan, M.C, Kiefer, J, Lupardus, P.J.
Deposit date:2019-03-13
Release date:2019-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Development of Potent and Selective Pyrazolopyrimidine IRAK4 Inhibitors.
J.Med.Chem., 62, 2019
7T1H
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BU of 7t1h by Molmil
Crystal structure of CAB1 Pantothenate Kinase from Saccharomyces cerevisiae in complex with compound YU281445
Descriptor: (8R)-2-{[(4-tert-butylphenyl)methyl]amino}-5-[(morpholin-4-yl)methyl][1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one, GLYCEROL, Pantothenate kinase CAB1
Authors:Gihaz, S, Ben Mamoun, C.
Deposit date:2021-12-01
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution crystal structure and chemical screening reveal pantothenate kinase as a new target for antifungal development.
Structure, 30, 2022
7AYZ
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BU of 7ayz by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with activator TH10785
Descriptor: N-glycosylase/DNA lyase, NICKEL (II) ION, ~{N}-cyclohexyl-2-cyclopropyl-quinazolin-4-amine
Authors:Masuyer, G, Davies, J.R, Stenmark, P.
Deposit date:2020-11-13
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Small-molecule activation of OGG1 increases oxidative DNA damage repair by gaining a new function.
Science, 376, 2022
6BZF
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BU of 6bzf by Molmil
Structure of S. cerevisiae Zip2:Spo16 complex, C2 form
Descriptor: Protein ZIP2, Sporulation-specific protein 16
Authors:Arora, K, Corbett, K.D.
Deposit date:2017-12-23
Release date:2018-02-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.286 Å)
Cite:The conserved XPF:ERCC1-like Zip2:Spo16 complex controls meiotic crossover formation through structure-specific DNA binding.
Nucleic Acids Res., 47, 2019
7AVN
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BU of 7avn by Molmil
Structure of marine actinobacteria clade rhodopsin (MacR) in orange form in P1 space group
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, ...
Authors:Gushchin, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gordeliy, V.
Deposit date:2020-11-05
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Alternating Access Mechanism in a Minimalistic Light-Driven Proton Pump
To Be Published
6XH0
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BU of 6xh0 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.9
Descriptor: MAGNESIUM ION, TAR binding protein 6.9, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
6XHH
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BU of 6xhh by Molmil
Far-red absorbing dark state of JSC1_58120g3 with bound 18-1, 18-2 dihydrobiliverdin IXa (DHBV), the native chromophore precursor
Descriptor: 1,2-ETHANEDIOL, JSC1_58120g3, mesobiliverdin IX(alpha)
Authors:Moreno, M.V, Rockwell, N.C, Fisher, A.J, Lagarias, J.C.
Deposit date:2020-06-18
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A far-red cyanobacteriochrome lineage specific for verdins.
Proc.Natl.Acad.Sci.USA, 117, 2020
6C08
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BU of 6c08 by Molmil
Zebrafish SLC38A9 with arginine bound in the cytosol open state
Descriptor: ARGININE, Sodium-coupled neutral amino acid transporter 9, antibody Fab Heavy Chain, ...
Authors:Lei, H.-T, Gonen, T.
Deposit date:2017-12-28
Release date:2018-06-20
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Crystal structure of arginine-bound lysosomal transporter SLC38A9 in the cytosol-open state.
Nat. Struct. Mol. Biol., 25, 2018
7AZ0
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BU of 7az0 by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with TH12161
Descriptor: 2-cyclopropyl-~{N}-(4-iodophenyl)quinazolin-4-amine, N-glycosylase/DNA lyase, NICKEL (II) ION
Authors:Davies, J.R, Masuyer, G, Stenmark, P.
Deposit date:2020-11-13
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Small-molecule activation of OGG1 increases oxidative DNA damage repair by gaining a new function.
Science, 376, 2022
7SMZ
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BU of 7smz by Molmil
X-ray crystal structure of CYP142A3 from Mycobacterium Marinum in complex with 4-cholesten-3-one
Descriptor: (8ALPHA,9BETA)-CHOLEST-4-EN-3-ONE, ACETATE ION, Cytochrome P450 142A3, ...
Authors:Ghith, A, Bruning, J.B, Bell, S.G.
Deposit date:2021-10-27
Release date:2022-09-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The Structures of the Steroid Binding CYP142 Cytochrome P450 Enzymes from Mycobacterium ulcerans and Mycobacterium marinum.
Acs Infect Dis., 8, 2022
6C18
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BU of 6c18 by Molmil
FGFR1 kinase complex with inhibitor SN37115
Descriptor: 3-(2,6-dichloro-3,5-dimethoxyphenyl)-1-{(3S)-1-[(2E)-4-(dimethylamino)but-2-enoyl]pyrrolidin-3-yl}-7-[(propan-2-yl)amino]-3,4-dihydropyrimido[4,5-d]pyrimidin-2(1H)-one, Fibroblast growth factor receptor 1, SULFATE ION
Authors:Yosaatmadja, Y, Smaill, J.B, Squire, C.J.
Deposit date:2018-01-04
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Understanding the structural requirements for covalent inhibition of FGFR1-3
To Be Published
8AJP
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BU of 8ajp by Molmil
Crystal structure of Halogen methyl transferase from Paraburkholderia xenovorans at 1.8 A in complex with SAH
Descriptor: CHLORIDE ION, Halide methyl transferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Leisinger, F, Seebeck, F.P.
Deposit date:2022-07-28
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthetic Reagents for Enzyme-Catalyzed Methylation.
Angew.Chem.Int.Ed.Engl., 61, 2022
7AYB
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BU of 7ayb by Molmil
Crystal Structure of wild type human mitochondrial 2-Enoyl Thioester Reductase (MECR)
Descriptor: ACETIC ACID, CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase, ...
Authors:Rahman, M.T, Koski, M.K, Autio, K.J, Kastaniotis, A.J, Wierenga, R.K, Hiltunen, J.K.
Deposit date:2020-11-12
Release date:2022-06-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An engineered variant of MECR reductase reveals indispensability of long-chain acyl-ACPs for mitochondrial respiration.
Nat Commun, 14, 2023
6OIU
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BU of 6oiu by Molmil
X-ray crystal structure of the ectodomain of the Toxoplasma gondii ME49 Aminopeptidase N (TGME49_224350)
Descriptor: Aminopeptidase N, GLYCEROL, ZINC ION
Authors:McGowan, S, Drinkwater, N.
Deposit date:2019-04-09
Release date:2020-09-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structure and specificity of the Toxoplasma gondii ME49 TgAPN2.
Biochem.J., 477, 2020
8AHU
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BU of 8ahu by Molmil
Crystal structure of D-amino acid aminotrensferase from Haliscomenobacter hydrossis complexed with D-cycloserine
Descriptor: Aminotransferase class IV, GLYCEROL, [5-hydroxy-6-methyl-4-({[(4E)-3-oxo-1,2-oxazolidin-4-ylidene]amino}methyl)pyridin-3-yl]methyl dihydrogen phosphate
Authors:Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Bakunova, A.K, Popov, V.O, Bezsudnova, E.Y.
Deposit date:2022-07-22
Release date:2022-08-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Mechanism of D-Cycloserine Inhibition of D-Amino Acid Transaminase from Haliscomenobacter hydrossis.
Biochemistry Mosc., 88, 2023
7AVO
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BU of 7avo by Molmil
Structure of marine actinobacteria clade rhodopsin (MacR) in orange form in P1211 space group
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, ...
Authors:Gushchin, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gordeliy, V.
Deposit date:2020-11-05
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Alternating Access Mechanism in a Minimalistic Light-Driven Proton Pump
To Be Published
8SHK
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BU of 8shk by Molmil
Structure of binary complex of mouse cGAS and bound ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, ZINC ION
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-14
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8AG2
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BU of 8ag2 by Molmil
Crystal structure of the BPTF bromodomain in complex with BI-7190
Descriptor: 5-[3-methoxy-4-[1-(4-methylpiperazin-1-yl)cyclopropyl]phenyl]-1,3,4-trimethyl-pyridin-2-one, Nucleosome-remodeling factor subunit BPTF
Authors:Bader, G, Boettcher, J, Wolkerstorfer, B.
Deposit date:2022-07-19
Release date:2022-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.025 Å)
Cite:Discovery of a Chemical Probe to Study Implications of BPTF Bromodomain Inhibition in Cellular and in vivo Experiments.
Chemmedchem, 18, 2023
8AQD
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BU of 8aqd by Molmil
Hydrophobic probe bound to Streptavidin - 1
Descriptor: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(dimethylamino)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
Authors:Igareta, N.V, Ward, T.R.
Deposit date:2022-08-12
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Hydrophobic probe bound to Streptavidin - 1
To Be Published
7B1T
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BU of 7b1t by Molmil
Crystal structure of BRD4(1) in complex with the inhibitor MPM6
Descriptor: 3-(5-azanyl-2-chloranyl-phenyl)-1-methyl-4,7-dihydro-2~{H}-cyclohepta[c]pyrrol-8-one, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE
Authors:Huegle, M.
Deposit date:2020-11-25
Release date:2022-06-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:A novel pan-selective bromodomain inhibitor for epigenetic drug design.
Eur.J.Med.Chem., 249, 2023
6ZAX
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BU of 6zax by Molmil
Nitrite-bound copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) at low dose (0.5 MGy)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Rose, S.L, Antonyuk, S.V, Sasaki, D, Yamashita, K, Hirata, K, Ueno, G, Ago, H, Eady, R.R, Tosha, T, Yamamoto, M, Hasnain, S.S.
Deposit date:2020-06-05
Release date:2021-01-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:An unprecedented insight into the catalytic mechanism of copper nitrite reductase from atomic-resolution and damage-free structures.
Sci Adv, 7, 2021
6GFK
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BU of 6gfk by Molmil
delta-N METTL16 MTase domain
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase
Authors:Chen, K.M, Mendel, M, Homolka, D, McCarthy, A.A, Pillai, R.S.
Deposit date:2018-04-30
Release date:2018-09-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Methylation of Structured RNA by the m6A Writer METTL16 Is Essential for Mouse Embryonic Development.
Mol. Cell, 71, 2018

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PDB entries from 2024-10-02

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