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6C31
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Crystal structure of TetR family protein Rv0078 in complex with DNA
Descriptor: DNA (5'-D(*GP*TP*TP*AP*CP*CP*GP*GP*CP*AP*GP*TP*CP*TP*GP*CP*TP*TP*GP*TP*AP*AP*A)-3'), DNA (5'-D(P*AP*CP*AP*AP*GP*CP*AP*GP*AP*CP*TP*GP*CP*CP*GP*GP*TP*AP*AP*C)-3'), TetR family transcriptional regulator
Authors:Hsu, H.C, Li, H.
Deposit date:2018-01-09
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cytokinin Signaling in Mycobacterium tuberculosis.
MBio, 9, 2018
6BGN
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Crystal Structure of 4-Oxalocrotonate Tautomerase After Incubation with 5-Fluoro-2-hydroxy-2,4-pentadienoate
Descriptor: 2-hydroxymuconate tautomerase, 5-fluoranyl-2-oxidanylidene-pentanoic acid, GLYCEROL, ...
Authors:Zhang, Y, Li, W, Stack, T.
Deposit date:2017-10-29
Release date:2018-02-21
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Inactivation of 4-Oxalocrotonate Tautomerase by 5-Halo-2-hydroxy-2,4-pentadienoates.
Biochemistry, 57, 2018
1F69
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CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*GP*CP*C)-3'), MAGNESIUM ION
Authors:Vargason, J.M, Eichman, B.F, Ho, P.S.
Deposit date:2000-06-20
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1M5U
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CRYSTAL STRUCTURE OF THE RESPONSE REGULATOR DIVK. STRUCTURE AT PH 8.0 IN THE APO-FORM
Descriptor: cell division response regulator DivK
Authors:Guillet, V, Ohta, N, Cabantous, S, Newton, A, Samama, J.-P, Structural Proteomics in Europe (SPINE)
Deposit date:2002-07-10
Release date:2002-11-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystallographic and biochemical studies of DivK reveal novel features of an essential response regulator in Caulobacter crescentus
J.Biol.Chem., 277, 2002
6BPO
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The crystal structure of the Ferric-Catecholate import receptor Fiu from K12 E. coli: Closed form (P1)
Descriptor: Catecholate siderophore receptor Fiu, octyl beta-D-glucopyranoside
Authors:Grinter, R.
Deposit date:2017-11-23
Release date:2018-11-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of the bacterial iron-catecholate transporter Fiu suggests that it imports substrates via a two-step mechanism.
J.Biol.Chem., 2019
7G00
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Crystal Structure of human FABP1 in complex with 2-[[3-(5-tert-butyl-1,2,4-oxadiazol-3-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl]cyclopentene-1-carboxylic acid
Descriptor: 2-{[(3P)-3-(5-tert-butyl-1,2,4-oxadiazol-3-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}cyclopent-1-ene-1-carboxylic acid, Fatty acid-binding protein, liver, ...
Authors:Ehler, A, Benz, J, Obst, U, Neidhart, W, Rudolph, M.G.
Deposit date:2023-04-27
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of a human FABP1 complex
To be published
1MCF
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PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS
Descriptor: Immunoglobulin lambda-1 light chain, PEPTIDE N-ACETYL-L-GLN-D-PHE-L-HIS-D-PRO-B-ALA-B-ALA-OH
Authors:Edmundson, A.B, Harris, D.L, Fan, Z.-C, Guddat, L.W.
Deposit date:1993-02-25
Release date:1994-01-31
Last modified:2022-04-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Principles and pitfalls in designing site-directed peptide ligands.
Proteins, 16, 1993
1M8Q
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Molecular Models of Averaged Rigor Crossbridges from Tomograms of Insect Flight Muscle
Descriptor: Skeletal muscle Actin, Skeletal muscle Myosin II, Skeletal muscle Myosin II Essential Light Chain, ...
Authors:Chen, L.F, Winkler, H, Reedy, M.K, Reedy, M.C, Taylor, K.A.
Deposit date:2002-07-25
Release date:2002-09-10
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (70 Å)
Cite:Molecular modeling of averaged rigor crossbridges from tomograms of insect flight muscle.
J.Struct.Biol., 138, 2002
7G81
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ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z104474512
Descriptor: 1-(2-ethoxyphenyl)piperazine, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
1F9I
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CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT Y42F
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Brudler, R, Meyer, T.E, Genick, U.K, Tollin, G, Getzoff, E.D.
Deposit date:2000-07-10
Release date:2000-07-21
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Coupling of hydrogen bonding to chromophore conformation and function in photoactive yellow protein.
Biochemistry, 39, 2000
7G9J
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ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with PCM-0102281-001
Descriptor: 1-(3,4-dihydropyrazin-1(2H)-yl)ethan-1-one, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
6BX4
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The crystal structure of fluoride channel Fluc Ec2 with Monobody S9
Descriptor: DECYL-BETA-D-MALTOPYRANOSIDE, FLUORIDE ION, Fluoride ion transporter CrcB, ...
Authors:Turman, D.L, Miller, C.
Deposit date:2017-12-16
Release date:2018-02-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular Interactions between a Fluoride Ion Channel and Synthetic Protein Blockers.
Biochemistry, 57, 2018
1F52
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CRYSTAL STRUCTURE OF GLUTAMINE SYNTHETASE FROM SALMONELLA TYPHIMURIUM CO-CRYSTALLIZED WITH ADP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GLUTAMINE SYNTHETASE, ...
Authors:Gill, H.S, Pfluegl, G.M.U, Eisenberg, D.
Deposit date:2000-06-12
Release date:2000-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The crystal structure of phosphinothricin in the active site of glutamine synthetase illuminates the mechanism of enzymatic inhibition.
Biochemistry, 40, 2001
7GJX
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BU of 7gjx by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-3ccb8ef6-1 (Mpro-P0744)
Descriptor: (4S)-6-chloro-N-(isoquinolin-4-yl)-1,2,3,4-tetrahydroisoquinoline-4-carboxamide, 3C-like proteinase, CHLORIDE ION, ...
Authors:Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
Deposit date:2023-08-11
Release date:2023-11-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
6BXQ
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Crystal Structure of HLA-B*57:01 with an HIV peptide RKV
Descriptor: Beta-2-microglobulin, HIV peptide RKV, MHC class I antigen
Authors:Gras, S, Rossjohn, J.
Deposit date:2017-12-18
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Identification of Native and Posttranslationally Modified HLA-B*57:01-Restricted HIV Envelope Derived Epitopes Using Immunoproteomics.
Proteomics, 18, 2018
6BYP
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BU of 6byp by Molmil
Structure of PL24 family Polysaccharide lyase-LOR107
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Ulaganathan, T.S, Cygler, M.
Deposit date:2017-12-21
Release date:2018-02-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-function analyses of a PL24 family ulvan lyase reveal key features and suggest its catalytic mechanism.
J. Biol. Chem., 293, 2018
1MHZ
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BU of 1mhz by Molmil
METHANE MONOOXYGENASE HYDROXYLASE
Descriptor: FE (III) ION, METHANE MONOOXYGENASE HYDROXYLASE
Authors:Elango, N, Radhakrishnan, R, Froland, W.A, Waller, B.J, Earhart, C.A, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1996-10-21
Release date:1997-05-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the hydroxylase component of methane monooxygenase from Methylosinus trichosporium OB3b
Protein Sci., 6, 1997
1F6T
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BU of 1f6t by Molmil
STRUCTURE OF THE NUCLEOSIDE DIPHOSPHATE KINASE/ALPHA-BORANO(RP)-TDP.MG COMPLEX
Descriptor: 2*-DEOXY-THYMIDINE-5*-ALPHA BORANO DIPHOSPHATE (ISOMER RP), MAGNESIUM ION, PROTEIN (NUCLEOSIDE DIPHOSPHATE KINASE)
Authors:Guerreiro, C, Boretto, J, Janin, J, Veron, M, Canard, B, Schneider, B, Sarfati, S, Deville-Bonne, D.
Deposit date:2000-06-23
Release date:2000-09-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural basis for activation of alpha-boranophosphate nucleotide analogues targeting drug-resistant reverse transcriptase.
EMBO J., 19, 2000
1FD4
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HUMAN BETA-DEFENSIN 2
Descriptor: BETA-DEFENSIN 2, SULFATE ION
Authors:Hoover, D.M, Lubkowski, J.
Deposit date:2000-07-19
Release date:2000-11-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of human beta-defensin-2 shows evidence of higher order oligomerization.
J.Biol.Chem., 275, 2000
1MAF
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BU of 1maf by Molmil
The Active Site Structure of Methylamine Dehydrogenase: Hydrazines Identify C6 as the Reactive Site of the Tryptophan Derived Quinone Cofactor
Descriptor: METHYLAMINE DEHYDROGENASE (HEAVY SUBUNIT), METHYLAMINE DEHYDROGENASE (LIGHT SUBUNIT), NITROGEN MOLECULE
Authors:Huizinga, E.G, Vellieux, F.M.D, Hol, W.G.J.
Deposit date:1992-05-20
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Active site structure of methylamine dehydrogenase: hydrazines identify C6 as the reactive site of the tryptophan-derived quinone cofactor.
Biochemistry, 31, 1992
7GLQ
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BU of 7glq by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with PET-UNK-8df914d1-2 (Mpro-P2007)
Descriptor: 2-(3-chlorophenyl)-N-[(4R)-imidazo[1,2-a]pyridin-3-yl]acetamide, 3C-like proteinase, CHLORIDE ION, ...
Authors:Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
Deposit date:2023-08-11
Release date:2023-11-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.063 Å)
Cite:Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
1F95
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SOLUTION STRUCTURE OF DYNEIN LIGHT CHAIN 8 (DLC8) AND BIM PEPTIDE COMPLEX
Descriptor: BCL2-LIKE 11 (APOPTOSIS FACILITATOR), DYNEIN
Authors:Fan, J.-S, Zhang, Q, Tochio, H, Li, M, Zhang, M.
Deposit date:2000-07-07
Release date:2001-02-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of diverse sequence-dependent target recognition by the 8 kDa dynein light chain.
J.Mol.Biol., 306, 2001
1FFQ
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CRYSTAL STRUCTURE OF CHITINASE A COMPLEXED WITH ALLOSAMIDIN
Descriptor: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ALLOSAMIZOLINE, CHITINASE A
Authors:Papanikolau, Y, Tavlas, G, Vorgias, C.E, Petratos, K.
Deposit date:2000-07-26
Release date:2003-02-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:De novo purification scheme and crystallization conditions yield high-resolution structures of chitinase A and its complex with the inhibitor allosamidin.
Acta Crystallogr.,Sect.D, 59, 2003
1MLC
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MONOCLONAL ANTIBODY FAB D44.1 RAISED AGAINST CHICKEN EGG-WHITE LYSOZYME COMPLEXED WITH LYSOZYME
Descriptor: HEN EGG WHITE LYSOZYME, IGG1-KAPPA D44.1 FAB (HEAVY CHAIN), IGG1-KAPPA D44.1 FAB (LIGHT CHAIN)
Authors:Braden, B.C, Souchon, H, Eisele, J.-L, Bentley, G.A, Bhat, T.N, Navaza, J, Poljak, R.J.
Deposit date:1995-03-10
Release date:1995-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structures of the free and the antigen-complexed Fab from monoclonal anti-lysozyme antibody D44.1.
J.Mol.Biol., 243, 1994
1MMK
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Crystal structure of ternary complex of the catalytic domain of human phenylalanine hydroxylase ((FeII)) complexed with tetrahydrobiopterin and thienylalanine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, BETA(2-THIENYL)ALANINE, FE (II) ION, ...
Authors:Andersen, O.A, Flatmark, T, Hough, E.
Deposit date:2002-09-04
Release date:2003-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:2.0A resolution crystal structures of the ternary complexes of human phenylalanine hydroxylase catalytic domain with tetrahydrobiopterin and 3-(2-thienyl)-L-alanine or L-norleucine: substrate specificity and molecular motions related to substrate binding
J.Mol.Biol., 333, 2003

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