PDB: 2705 resultsInfo pagesStatus searchChemie searchBIRD

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7PIP	70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. Deposit date: 2021-08-23 Release date: 2022-05-25 Last modified: 2022-10-19 Method: ELECTRON MICROSCOPY (9.3 Å) Cite: Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PIR	70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. Deposit date: 2021-08-23 Release date: 2022-05-25 Last modified: 2022-10-19 Method: ELECTRON MICROSCOPY (12.1 Å) Cite: Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7Q0R	Structure of the Candida albicans 80S ribosome in complex with blasticidin s Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... Authors: Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M. Deposit date: 2021-10-16 Release date: 2022-05-25 Last modified: 2022-06-08 Method: ELECTRON MICROSCOPY (2.67 Å) Cite: E-site drug specificity of the human pathogen Candida albicans ribosome. Sci Adv, 8, 2022
6W6P	MultiBody Refinement of 70S Ribosome from Enterococcus faecalis Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Jogl, G, Khayat, R. Deposit date: 2020-03-17 Release date: 2020-10-14 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
7PKT	Large subunit of the Chlamydomonas reinhardtii mitoribosome Descriptor: 50S ribosomal protein L20, 50S ribosomal protein L9, chloroplastic, ... Authors: Waltz, F, Soufari, H, Hashem, Y. Deposit date: 2021-08-26 Release date: 2022-06-15 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3 Å) Cite: How to build a ribosome from RNA fragments in Chlamydomonas mitochondria. Nat Commun, 12, 2021
6WDE	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-01 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WD6	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-08 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WDC	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-01 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WD7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-08 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WDG	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-01 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WD2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-08 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WD9	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-08 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
7Q4K	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fostier, C.R, Ousalem, F, Soufari, H, Leroy, E.C, Ngo, S, Innis, A, Hashem, Y, Boel, G. Deposit date: 2021-10-31 Release date: 2022-11-16 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3 Å) Cite: Regulation of the macrolide resistance ABC-F translation factor MsrD. Nat Commun, 14, 2023
7WG5	Cyclic electron transport supercomplex NDH-PSI from Arabidopsis Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ... Authors: Pan, X.W, Li, M. Deposit date: 2021-12-28 Release date: 2022-03-16 Method: ELECTRON MICROSCOPY (3.89 Å) Cite: Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana. Mol Plant, 15, 2022
7WFG	Subcomplexes A and E in NDH complex from Arabidopsis Descriptor: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase subunit H, chloroplastic, ... Authors: Pan, X.W, Li, M. Deposit date: 2021-12-26 Release date: 2022-03-16 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (4.33 Å) Cite: Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana. Mol Plant, 15, 2022
7Q5Y	Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... Authors: Warkentin, E, Ermler, U, Peng, G. Deposit date: 2021-11-05 Release date: 2022-11-16 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus To Be Published
6WNW	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA Descriptor: 16S ribosomal RNA, 23s-5s joint ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Korostelev, A.A, Mankin, A.S, Huang, S, Aleksashin, N.A, Klepacki, D, Reier, K, Kefi, A, Szal, A, Remme, J, Jaeger, L, Vazquez-Laslop, N. Deposit date: 2020-04-23 Release date: 2020-06-24 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Ribosome engineering reveals the importance of 5S rRNA autonomy for ribosome assembly. Nat Commun, 11, 2020
6WRU	Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... Authors: Belousoff, M.J. Deposit date: 2020-04-30 Release date: 2020-06-03 Last modified: 2020-12-16 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Characterization of the Core Ribosomal Binding Region for the Oxazolidone Family of Antibiotics Using Cryo-EM. Acs Pharmacol Transl Sci, 3, 2020
6WDF	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-01 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WDB	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-01 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WNT	50S ribosomal subunit without free 5S rRNA and perturbed PTC Descriptor: 23s-5s joint ribosomal RNA, 50S ribosomal protein L1, 50S ribosomal protein L10, ... Authors: Loveland, A.B, Korostelev, A.A, Mankin, A.S, Huang, S, Aleksashin, N.A, Klepacki, D, Reier, K, Kefi, A, Szal, A, Remme, J, Jaeger, L, Vazquez-Laslop, N. Deposit date: 2020-04-23 Release date: 2020-06-24 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Ribosome engineering reveals the importance of 5S rRNA autonomy for ribosome assembly. Nat Commun, 11, 2020
6WD5	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-08 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WDM	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-01 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WDD	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Demo, G, Korostelev, A.A. Deposit date: 2020-03-31 Release date: 2020-07-01 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
7QEP	Cryo-EM structure of the ribosome from Encephalitozoon cuniculi Descriptor: 18S ribosomal RNA, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, ... Authors: Nicholson, D, Ranson, N.A, Melnikov, S.V. Deposit date: 2021-12-03 Release date: 2022-02-09 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Adaptation to genome decay in the structure of the smallest eukaryotic ribosome Nat Commun, 13, 2022

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