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7W9V
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BU of 7w9v by Molmil
Cryo-EM structure of nucleosome in complex with p300 acetyltransferase catalytic core (complex I)
Descriptor: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Hatazawa, S, Liu, J, Takizawa, Y, Zandian, M, Negishi, L, Kutateladze, T.G, Kurumizaka, H.
Deposit date:2021-12-10
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.95 Å)
Cite:Structural basis for binding diversity of acetyltransferase p300 to the nucleosome.
Iscience, 25, 2022
6N8T
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BU of 6n8t by Molmil
Hsp104DWB closed conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein 104
Authors:Lee, S, Rho, S.H, Lee, J, Sung, N, Liu, J, Tsai, F.T.F.
Deposit date:2018-11-30
Release date:2019-01-02
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Cryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation.
Cell Rep, 26, 2019
8KGW
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BU of 8kgw by Molmil
Molecular mechanism of prostaglandin transporter SLCO2A1
Descriptor: (Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acid, Solute carrier organic anion transporter family member 2A1
Authors:Li, Y.H, Qu, Q.H, Zhu, Z.N, Chao, Y.L, Zhou, Z.X.
Deposit date:2023-08-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular mechanism of prostaglandin transporter SLCO2A1
To Be Published
6ND4
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BU of 6nd4 by Molmil
Conformational switches control early maturation of the eukaryotic small ribosomal subunit
Descriptor: 18S rRNA 5' domain start, 5'ETS rRNA, Bud21, ...
Authors:Hunziker, M, Barandun, J, Klinge, S.
Deposit date:2018-12-13
Release date:2019-06-19
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Conformational switches control early maturation of the eukaryotic small ribosomal subunit.
Elife, 8, 2019
5IV3
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BU of 5iv3 by Molmil
Crystal structure of human soluble adenylyl cyclase in complex with alpha,beta-methyleneadenosine-5'-triphosphate and the allosteric inhibitor LRE1
Descriptor: 1,2-ETHANEDIOL, 6-chloro-N~4~-cyclopropyl-N~4~-[(thiophen-2-yl)methyl]pyrimidine-2,4-diamine, ACETATE ION, ...
Authors:Kleinboelting, S, Steegborn, C.
Deposit date:2016-03-18
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Discovery of LRE1 as a specific and allosteric inhibitor of soluble adenylyl cyclase.
Nat.Chem.Biol., 12, 2016
6NBB
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BU of 6nbb by Molmil
Horse liver alcohol dehydrogenase determined using single-particle cryo-EM at 200 keV
Descriptor: Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Herzik Jr, M.A, Wu, M, Lander, G.C.
Deposit date:2018-12-06
Release date:2019-03-13
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-resolution structure determination of sub-100 kDa complexes using conventional cryo-EM.
Nat Commun, 10, 2019
1Y20
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BU of 1y20 by Molmil
Crystal structure of the NR1 ligand-binding core in complex with ACPC
Descriptor: 1-AMINOCYCLOPROPANECARBOXYLIC ACID, Glutamate [NMDA] receptor subunit zeta 1
Authors:Inanobe, A, Gouaux, E.
Deposit date:2004-11-19
Release date:2005-07-12
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of Partial Agonist Action at the NR1 Subunit of NMDA Receptors.
Neuron, 47, 2005
5MKF
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BU of 5mkf by Molmil
cryoEM Structure of Polycystin-2 in complex with calcium and lipids
Descriptor: 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wilkes, M, Madej, M.G, Ziegler, C.
Deposit date:2016-12-04
Release date:2017-01-18
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Molecular insights into lipid-assisted Ca(2+) regulation of the TRP channel Polycystin-2.
Nat. Struct. Mol. Biol., 24, 2017
8OX4
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BU of 8ox4 by Molmil
Cryo-EM structure of ATP8B1-CDC50A in E1-ATP conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, MAGNESIUM ION, ...
Authors:Dieudonne, T, Kummerer, F, Juknaviciute Laursen, M, Stock, C, Kock Flygaard, R, Khalid, S, Lenoir, G, Lyons, J.A, Lindorff-Larsen, K, Nissen, P.
Deposit date:2023-05-01
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Activation and substrate specificity of the human P4-ATPase ATP8B1.
Nat Commun, 14, 2023
1Y1M
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BU of 1y1m by Molmil
Crystal structure of the NR1 ligand binding core in complex with cycloleucine
Descriptor: 1-AMINOCYCLOPENTANECARBOXYLIC ACID, Glutamate [NMDA] receptor subunit zeta 1
Authors:Inanobe, A, Gouaux, E.
Deposit date:2004-11-18
Release date:2005-07-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of Partial Agonist Action at the NR1 Subunit of NMDA Receptors.
Neuron, 47, 2005
1Y1Z
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BU of 1y1z by Molmil
Crystal structure of the NR1 ligand binding core in complex with ACBC
Descriptor: 1-AMINOCYCLOBUTANECARBOXLIC ACID, Glutamate [NMDA] receptor subunit zeta 1
Authors:Inanobe, A, Gouaux, E.
Deposit date:2004-11-19
Release date:2005-07-12
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanism of Partial Agonist Action at the NR1 Subunit of NMDA Receptors.
Neuron, 47, 2005
1JLN
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BU of 1jln by Molmil
Crystal structure of the catalytic domain of protein tyrosine phosphatase PTP-SL/BR7
Descriptor: Protein Tyrosine Phosphatase, receptor type, R
Authors:Szedlacsek, S.E, Aricescu, A.R, Fulga, T.A, Renault, L, Scheidig, A.J.
Deposit date:2001-07-16
Release date:2001-08-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of PTP-SL/PTPBR7 catalytic domain: implications for MAP kinase regulation.
J.Mol.Biol., 311, 2001
8P94
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BU of 8p94 by Molmil
Cryo-EM structure of cortactin stabilized Arp2/3-complex nucleated actin branches
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
Authors:Liu, T, Moores, C.A.
Deposit date:2023-06-05
Release date:2024-01-03
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cortactin stabilizes actin branches by bridging activated Arp2/3 to its nucleated actin filament.
Nat.Struct.Mol.Biol., 31, 2024
8HWU
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BU of 8hwu by Molmil
Solution structure of frog peptide LL-TIL
Descriptor: LL-TIL
Authors:Rami, M.J, Sarma, S.P.
Deposit date:2023-01-03
Release date:2023-11-15
Method:SOLUTION NMR
Cite:Structural, Functional, and Mutational Studies of a Potent Subtilisin Inhibitor from Budgett's Frog, Lepidobatrachus laevis.
Biochemistry, 62, 2023
6NR3
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BU of 6nr3 by Molmil
Cryo-EM structure of the TRPM8 ion channel in complex with high occupancy icilin, PI(4,5)P2, and calcium
Descriptor: (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl icosa-5,8,11,14-tetraenoate, CALCIUM ION, Icilin, ...
Authors:Yin, Y, Le, S.C, Hsu, A.L, Borgnia, M.J, Yang, H, Lee, S.-Y.
Deposit date:2019-01-22
Release date:2019-02-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.
Science, 363, 2019
6TAX
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BU of 6tax by Molmil
Mouse RNF213 wild type protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNF213,E3 ubiquitin-protein ligase RNF213,E3 ubiquitin-protein ligase RNF213, ...
Authors:Ahel, J, Meinhart, A, Haselbach, D, Clausen, T.
Deposit date:2019-10-31
Release date:2020-07-01
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Moyamoya disease factor RNF213 is a giant E3 ligase with a dynein-like core and a distinct ubiquitin-transfer mechanism.
Elife, 9, 2020
8PB9
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BU of 8pb9 by Molmil
Cryo-EM structure of the c-di-GMP-bound FleQ-FleN master regulator complex from Pseudomonas aeruginosa
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Antiactivator FleN, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Torres-Sanchez, L.T, Krasteva, P.V.
Deposit date:2023-06-08
Release date:2023-12-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of the P. aeruginosa FleQ-FleN master regulators reveal large-scale conformational switching in motility and biofilm control.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PKD
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BU of 8pkd by Molmil
Cryo-EM structure of Orrella dioscoreae BcsD
Descriptor: Cellulose synthase operon protein D
Authors:Puygrenier, L, Decossas, M, Krasteva, P.V.
Deposit date:2023-06-26
Release date:2023-12-20
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (2.33 Å)
Cite:Structures and roles of BcsD and partner scaffold proteins in proteobacterial cellulose secretion.
Curr.Biol., 34, 2024
6BV7
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BU of 6bv7 by Molmil
NMR structure of Sodium/Calcium Exchanger 1 (NCX1) Two-helix Bundle (THB) domain
Descriptor: Sodium/calcium exchanger 1
Authors:Yuan, J, Yuan, C, Bruschweiler, R.
Deposit date:2017-12-12
Release date:2018-06-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Intracellular Loop of the Na+/Ca2+Exchanger Contains an "Awareness Ribbon"-Shaped Two-Helix Bundle Domain.
Biochemistry, 57, 2018
6MZM
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BU of 6mzm by Molmil
Human TFIID bound to promoter DNA and TFIIA
Descriptor: SCP DNA (80-MER), TATA-box-binding protein, Transcription initiation factor IIA subunit 1, ...
Authors:Patel, A.B, Louder, R.K, Greber, B.J, Grunberg, S, Luo, J, Fang, J, Liu, Y, Ranish, J, Hahn, S, Nogales, E.
Deposit date:2018-11-05
Release date:2018-11-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Structure of human TFIID and mechanism of TBP loading onto promoter DNA.
Science, 362, 2018
6SKO
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BU of 6sko by Molmil
Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork - conformation 2 MCM CTD:ssDNA
Descriptor: DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, DNA replication licensing factor MCM4, ...
Authors:Yeeles, J, Baretic, D, Jenkyn-Bedford, M.
Deposit date:2019-08-16
Release date:2020-05-06
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork.
Mol.Cell, 78, 2020
6Z41
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BU of 6z41 by Molmil
NMR solution structure of the carbohydrate-binding module family 73 (CBM73) from Cellvibrio japonicus CjLPMO10A
Descriptor: Carbohydrate binding protein, putative, cpb33A
Authors:Madland, E, Aachmann, F.L, Courtade, G.
Deposit date:2020-05-22
Release date:2021-05-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and functional variation of chitin-binding domains of a lytic polysaccharide monooxygenase from Cellvibrio japonicus.
J.Biol.Chem., 297, 2021
6N0F
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BU of 6n0f by Molmil
Cryo-EM structure of the HO BMC shell: subregion classified for BMC-T: TD-TSTSTS
Descriptor: Microcompartments protein
Authors:Greber, B.J, Sutter, M, Kerfeld, C.A.
Deposit date:2018-11-07
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The Plasticity of Molecular Interactions Governs Bacterial Microcompartment Shell Assembly.
Structure, 27, 2019
6TED
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BU of 6ted by Molmil
Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elongation activation by RTF1
Descriptor: DNA (37-MER), DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase subunit, ...
Authors:Vos, S.M, Farnung, L, Cramer, P.
Deposit date:2019-11-11
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of complete Pol II-DSIF-PAF-SPT6 transcription complex reveals RTF1 allosteric activation.
Nat.Struct.Mol.Biol., 27, 2020
6NXE
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BU of 6nxe by Molmil
Cryo-EM Reconstruction of Protease-Activateable Adeno-Associated Virus 9 (AAV9-L001)
Descriptor: Capsid protein VP1
Authors:Bennett, A.B, Agbandje-Mckenna, M.
Deposit date:2019-02-08
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Protease-Activatable Adeno-Associated Virus Vector for Gene Delivery to Damaged Heart Tissue.
Mol. Ther., 27, 2019

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