Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PFY
DownloadVisualize
BU of 8pfy by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DAniF)(CO3)3] in condition B
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Lysozyme C, ...
Authors:Teran, A, Ferraro, G, Merlino, A.
Deposit date:2023-06-16
Release date:2023-07-19
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Charge effect in protein metalation reactions by diruthenium complexes
Inorg Chem Front, 2023
6TMY
DownloadVisualize
BU of 6tmy by Molmil
Crystal structure of isoform CBd of the basic phospholipase A2 subunit of crotoxin from Crotalus durissus terrificus
Descriptor: CHLORIDE ION, Phospholipase A2 crotoxin basic subunit CBc, SODIUM ION, ...
Authors:Nemecz, D, Ostrowski, M, Saul, F.A, Faure, G.
Deposit date:2019-12-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Isoform CBd of the Basic Phospholipase A 2 Subunit of Crotoxin: Description of the Structural Framework of CB for Interaction with Protein Targets.
Molecules, 25, 2020
6Z4T
DownloadVisualize
BU of 6z4t by Molmil
sperm whale myoglobin mutant (H64V V64A) bearing the non-canonical amino acid 2-Amino-3-(thiazol-5-yl)propanoic acid as axial heme ligand
Descriptor: Myoglobin, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Tinzl, M, Hilvert, D, Mittl, P.R.E.
Deposit date:2020-05-25
Release date:2021-04-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Noncanonical Heme Ligands Steer Carbene Transfer Reactivity in an Artificial Metalloenzyme*.
Angew.Chem.Int.Ed.Engl., 60, 2021
6H3M
DownloadVisualize
BU of 6h3m by Molmil
The crystal structure of a human seleno-insulin analog
Descriptor: Insulin
Authors:Lansky, S, Weil-Ktorza, O, Metanis, N, Shoham, G.
Deposit date:2018-07-19
Release date:2019-08-14
Last modified:2020-08-26
Method:X-RAY DIFFRACTION (1.821 Å)
Cite:Substitution of an Internal Disulfide Bridge with a Diselenide Enhances both Foldability and Stability of Human Insulin.
Chemistry, 25, 2019
8PFT
DownloadVisualize
BU of 8pft by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(D-p-FPhF)(CO3)3] in condition A
Descriptor: 6,8-bis(4-fluorophenyl)-1,5-bis(oxidanyl)-2,4-dioxa-6,8-diaza-1$l^{4},5$l^{4}-diruthenabicyclo[3.3.0]octan-3-one, CHLORIDE ION, Lysozyme C, ...
Authors:Teran, A, Ferraro, G, Merlino, A.
Deposit date:2023-06-16
Release date:2023-07-19
Method:X-RAY DIFFRACTION (1.304 Å)
Cite:Charge effect in protein metalation reactions by diruthenium complexes
Inorg Chem Front, 2023
6TN8
DownloadVisualize
BU of 6tn8 by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound BI-9564
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 4-[4-[(dimethylamino)methyl]-2,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one, ...
Authors:Williams, E.P, Chen, Z, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
Deposit date:2019-12-06
Release date:2019-12-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound BI-9564
To Be Published
6TNE
DownloadVisualize
BU of 6tne by Molmil
Crystal structure of receiver domain from Hybrid Histidine Kinase CckA
Descriptor: Histidine kinase
Authors:Dubey, B.N, Bruederlin, M, Schirmer, T.
Deposit date:2019-12-06
Release date:2020-12-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of receiver domain from cyclic-di-GMP controlled hybrid histidine kinase
to be published
6TS4
DownloadVisualize
BU of 6ts4 by Molmil
Coagulation factor XI protease domain in complex with active site inhibitor
Descriptor: 2-[2-[[3-[3-(aminomethyl)phenyl]phenyl]carbonylamino]phenyl]ethanoic acid, Coagulation factor XI, DIMETHYL SULFOXIDE, ...
Authors:Renatus, M, Schiering, N.
Deposit date:2019-12-19
Release date:2020-07-08
Last modified:2020-08-26
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structure-Based Design and Preclinical Characterization of Selective and Orally Bioavailable Factor XIa Inhibitors: Demonstrating the Power of an Integrated S1 Protease Family Approach.
J.Med.Chem., 63, 2020
5F1X
DownloadVisualize
BU of 5f1x by Molmil
Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with ATP
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-TRIPHOSPHATE
Authors:Hughes, S.J, Antoshchenko, T, Song, J.H, Pizarro, J, Park, H.W.
Deposit date:2015-11-30
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the ATP Site of GRP78 with Nucleotide Triphosphate Analogs.
Plos One, 11, 2016
8PFW
DownloadVisualize
BU of 8pfw by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DAniF)(CO3)3] in condition A
Descriptor: CHLORIDE ION, K2[Ru2(DAniF)(CO3)3], Lysozyme C, ...
Authors:Teran, A, Ferraro, G, Merlino, A.
Deposit date:2023-06-16
Release date:2023-07-19
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Charge effect in protein metalation reactions by diruthenium complexes
Inorg Chem Front, 2023
6TO7
DownloadVisualize
BU of 6to7 by Molmil
Crystal structure of the Orexin-1 receptor in complex with suvorexant at 2.29 A resolution
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CITRIC ACID, Orexin receptor type 1, ...
Authors:Rappas, M, Ali, A, Bennett, K.A, Brown, J.D, Bucknell, S.J, Congreve, M, Cooke, R.M, Cseke, G, de Graaf, C, Dore, A.S, Errey, J.C, Jazayeri, A, Marshall, F.H, Mason, J.S, Mould, R, Patel, J.C, Tehan, B.G, Weir, M, Christopher, J.A.
Deposit date:2019-12-11
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Comparison of Orexin 1 and Orexin 2 Ligand Binding Modes Using X-ray Crystallography and Computational Analysis.
J.Med.Chem., 63, 2020
5F6B
DownloadVisualize
BU of 5f6b by Molmil
Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal at 1.3 Angstrom Resolution
Descriptor: ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:Nosrati, M, Nossoni, Z, Geiger, J.H.
Deposit date:2015-12-05
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W mutant of human Cellular Retinol Binding ProteinII in complex with All-trans-Retinal at 1.31 Angstrom Resolution
To Be Published
6Z4R
DownloadVisualize
BU of 6z4r by Molmil
sperm whale myoglobin mutant (H64V V64A) bearing the non-canonical amino acid 3-thienylalanine as axial heme ligand
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Tinzl, M, Hilvert, D, Mittl, P.R.E.
Deposit date:2020-05-25
Release date:2021-04-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Noncanonical Heme Ligands Steer Carbene Transfer Reactivity in an Artificial Metalloenzyme*.
Angew.Chem.Int.Ed.Engl., 60, 2021
8PFX
DownloadVisualize
BU of 8pfx by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(D-p-FPhF)(CO3)3] in condition B
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6,8-bis(4-fluorophenyl)-1,5-bis(oxidanyl)-2,4-dioxa-6,8-diaza-1$l^{4},5$l^{4}-diruthenabicyclo[3.3.0]octan-3-one, FORMIC ACID, ...
Authors:Teran, A, Ferraro, G, Merlino, A.
Deposit date:2023-06-16
Release date:2023-07-19
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Charge effect in protein metalation reactions by diruthenium complexes
Inorg Chem Front, 2023
4QKG
DownloadVisualize
BU of 4qkg by Molmil
Monomeric form of human LLT1, a ligand for NKR-P1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C-type lectin domain family 2 member D, SULFATE ION
Authors:Skalova, T, Blaha, J, Harlos, K, Duskova, J, Koval, T, Stransky, J, Hasek, J, Vanek, O, Dohnalek, J.
Deposit date:2014-06-06
Release date:2015-03-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Four crystal structures of human LLT1, a ligand of human NKR-P1, in varied glycosylation and oligomerization states
Acta Crystallogr.,Sect.D, 71, 2015
4QER
DownloadVisualize
BU of 4qer by Molmil
Crystal Structure of the Complex of Phospholipase A2 with Resveratrol at 1.20 A Resolution
Descriptor: Phospholipase A2 VRV-PL-VIIIa, RESVERATROL, SULFATE ION
Authors:Shukla, P.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-05-18
Release date:2014-06-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structures and binding studies of the complexes of phospholipase A2 with five inhibitors
Biochim.Biophys.Acta, 1854, 2015
6TQ7
DownloadVisualize
BU of 6tq7 by Molmil
Crystal structure of the Orexin-1 receptor in complex with SB-334867
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, 1-(2-methyl-1,3-benzoxazol-6-yl)-3-(1,5-naphthyridin-4-yl)urea, Orexin receptor type 1, ...
Authors:Rappas, M, Ali, A, Bennett, K.A, Brown, J.D, Bucknell, S.J, Congreve, M, Cooke, R.M, Cseke, G, de Graaf, C, Dore, A.S, Errey, J.C, Jazayeri, A, Marshall, F.H, Mason, J.S, Mould, R, Patel, J.C, Tehan, B.G, Weir, M, Christopher, J.A.
Deposit date:2019-12-16
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6636 Å)
Cite:Comparison of Orexin 1 and Orexin 2 Ligand Binding Modes Using X-ray Crystallography and Computational Analysis.
J.Med.Chem., 63, 2020
6TPK
DownloadVisualize
BU of 6tpk by Molmil
Crystal structure of the human oxytocin receptor
Descriptor: (3~{R},6~{R})-6-[(2~{S})-butan-2-yl]-3-(2,3-dihydro-1~{H}-inden-2-yl)-1-[(1~{R})-1-(2-methyl-1,3-oxazol-4-yl)-2-morpholin-4-yl-2-oxidanylidene-ethyl]piperazine-2,5-dione, CHOLESTEROL, DI(HYDROXYETHYL)ETHER, ...
Authors:Waltenspuehl, Y, Schoeppe, J, Ehrenmann, J, Kummer, L, Plueckthun, A.
Deposit date:2019-12-13
Release date:2020-08-05
Last modified:2020-09-02
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the human oxytocin receptor.
Sci Adv, 6, 2020
4QMN
DownloadVisualize
BU of 4qmn by Molmil
MST3 in complex with BOSUTINIB
Descriptor: 4-[(2,4-dichloro-5-methoxyphenyl)amino]-6-methoxy-7-[3-(4-methylpiperazin-1-yl)propoxy]quinoline-3-carbonitrile, Serine/threonine-protein kinase 24
Authors:Olesen, S.H, Watts, C, Zhu, J.-Y, Schonbrunn, E.
Deposit date:2014-06-16
Release date:2015-07-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.091 Å)
Cite:Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3).
Chemmedchem, 11, 2016
5EX8
DownloadVisualize
BU of 5ex8 by Molmil
Structure of P450 StaF from glycopeptide antibiotic A47934 biosynthesis; ethylene glycol cryo
Descriptor: 1,2-ETHANEDIOL, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cryle, M.J, Ulrich, V.
Deposit date:2015-11-23
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and structural characterisation of the second oxidative crosslinking step during the biosynthesis of the glycopeptide antibiotic A47934.
Beilstein J Org Chem, 12, 2016
4QJ2
DownloadVisualize
BU of 4qj2 by Molmil
Crystal structure of inactive HIV-1 protease variant (I50V/A71V) in complex with WT p1-p6 substrate
Descriptor: GLYCEROL, PHOSPHATE ION, Protease, ...
Authors:Lin, K.H, Schiffer, C.A.
Deposit date:2014-06-03
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural basis and distal effects of Gag substrate coevolution in drug resistance to HIV-1 protease.
Proc.Natl.Acad.Sci.USA, 111, 2014
4QJA
DownloadVisualize
BU of 4qja by Molmil
Crystal structure of inactive HIV-1 protease in complex with p1-p6 substrate variant (P453L)
Descriptor: Protease, SULFATE ION, p1-p6 peptide
Authors:Lin, K.H, Schiffer, C.A.
Deposit date:2014-06-03
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural basis and distal effects of Gag substrate coevolution in drug resistance to HIV-1 protease.
Proc.Natl.Acad.Sci.USA, 111, 2014
6YV5
DownloadVisualize
BU of 6yv5 by Molmil
Crystal Structure of Serine protease SplB N3Q/S154R from Staphylococcus aureus
Descriptor: SODIUM ION, Serine protease
Authors:Rangel Pereira, M.R, Brear, P, Knyphausen, P, Jermutus, L, Hollfelder, F.
Deposit date:2020-04-27
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal Structure of Serine protease SplB N3Q/S154R from Staphylococcus aureus
To Be Published
8PYQ
DownloadVisualize
BU of 8pyq by Molmil
10 micrometer HEWL crystals solved at room-temperature using fixed-target serial crystallography.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Mason, T.J, Carrillo, M, Beale, J.H, Padeste, C.
Deposit date:2023-07-25
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Micro-structured polymer fixed targets for serial crystallography at synchrotrons and XFELs.
Iucrj, 10, 2023
8PYO
DownloadVisualize
BU of 8pyo by Molmil
5 micrometer HEWL crystals solved at room-temperature using fixed-target serial crystallography.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Mason, T.J, Carrillo, M, Beale, J.H, Padeste, C.
Deposit date:2023-07-25
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Micro-structured polymer fixed targets for serial crystallography at synchrotrons and XFELs.
Iucrj, 10, 2023

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon