Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MLN
DownloadVisualize
BU of 5mln by Molmil
The crystal structure of alcohol dehydrogenase 10 from Candida magnoliae
Descriptor: Alcohol dehydrogenase 3, DI(HYDROXYETHYL)ETHER, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Castellanos, J.R.G, Mattevi, A.
Deposit date:2016-12-07
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:One-Pot Biocatalytic Double Oxidation of alpha-Isophorone for the Synthesis of Ketoisophorone
Chemcatchem, 2017
8QF2
DownloadVisualize
BU of 8qf2 by Molmil
Beta-L-Arabinofurano-cyclitol Aziridines are Cysteine-directed Broad-spectrum Inhibitors and Activity-based Probes for Retaining Beta-L-arabinofuranosidases
Descriptor: (1~{S},2~{S},3~{S},4~{R})-4-azanyl-3-(hydroxymethyl)cyclopentane-1,2-diol, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
Authors:Borlandelli, V, Offen, W.A, Moroz, O, Nin-Hill, A, McGregor, N, Binkhorst, L, Armstrong, Z, Ishiwata, A, Artola, M, Rovira, C, Davies, G.J, Overkleeft, H.
Deposit date:2023-09-02
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:beta-l- Arabino furano-cyclitol Aziridines Are Covalent Broad-Spectrum Inhibitors and Activity-Based Probes for Retaining beta-l-Arabinofuranosidases.
Acs Chem.Biol., 18, 2023
8JE0
DownloadVisualize
BU of 8je0 by Molmil
A novel amidohydrolase
Descriptor: 1,2-ETHANEDIOL, Amidase, ZINC ION
Authors:Ma, D, Feng, R.
Deposit date:2023-05-15
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A novel amidohydrolase catalyze the degradation of PAM by Klebsiella sp. PCX
To Be Published
6KVV
DownloadVisualize
BU of 6kvv by Molmil
Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose
Descriptor: Endo-1,4-beta-xylanase 2, GLYCEROL, IODIDE ION, ...
Authors:Li, C, Wan, Q.
Deposit date:2019-09-05
Release date:2021-07-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:X-ray crystallographic studies of family 11 xylanase Michaelis and product complexes: implications for the catalytic mechanism
To Be Published
6KWE
DownloadVisualize
BU of 6kwe by Molmil
Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose
Descriptor: Endo-1,4-beta-xylanase 2, GLYCEROL, IODIDE ION
Authors:Li, C, Wan, Q.
Deposit date:2019-09-06
Release date:2021-07-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.503 Å)
Cite:X-ray crystallographic studies of family 11 xylanase Michaelis and product complexes : implications for the catalytic mechanism
To Be Published
6KWH
DownloadVisualize
BU of 6kwh by Molmil
Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Li, C, Wan, Q.
Deposit date:2019-09-06
Release date:2021-07-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:X-ray crystallographic studies of family 11 xylanase Michaelis and product complexes: implications for the catalytic mechanism
To Be Published
7M40
DownloadVisualize
BU of 7m40 by Molmil
Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)
Descriptor: Histone-binding protein RBBP4, N~3~-{4-[3-(dimethylamino)pyrrolidin-1-yl]-6,7-dimethoxyquinazolin-2-yl}-N~1~,N~1~-dimethylpropane-1,3-diamine
Authors:Perveen, S, Dong, A, Tempel, W, Zepeda-Velazquez, C, Abbey, M, McLeod, D, Marcellus, R, Mohammed, M, Ensan, D, Panagopoulos, D, Trush, V, Gibson, E, Brown, P.J, Arrowsmith, C.H, Schapira, M, Al-awar, R, Vedadi, M, Structural Genomics Consortium (SGC)
Deposit date:2021-03-19
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)
To Be Published
8QND
DownloadVisualize
BU of 8qnd by Molmil
Crystal structure of the ribonucleoside hydrolase C from Lactobacillus reuteri
Descriptor: CALCIUM ION, Inosine-uridine nucleoside N-ribohydrolase
Authors:Matyuta, I.O, Minyaev, M.E, Shaposhnikov, L.A, Pometun, A.A, Tishkov, V.I, Popov, V.O, Boyko, K.M.
Deposit date:2023-09-26
Release date:2023-12-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Functional Examination of Novel Ribonucleoside Hydrolase C (RihC) from Limosilactobacillus reuteri LR1.
Int J Mol Sci, 25, 2023
1GT0
DownloadVisualize
BU of 1gt0 by Molmil
Crystal structure of a POU/HMG/DNA ternary complex
Descriptor: 5'-D(*AP*TP*CP*CP*CP*AP*TP*TP*AP*GP* CP*AP*TP*CP*CP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3', 5'-D(*TP*TP*CP*TP*TP*TP*GP*TP*TP*TP* GP*GP*AP* TP*GP*CP*TP*AP*AP*TP*GP*GP*GP*A)-3', OCTAMER-BINDING TRANSCRIPTION FACTOR 1, ...
Authors:Remenyi, A, Wilmanns, M.
Deposit date:2002-01-09
Release date:2003-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of a POU/Hmg/DNA Ternary Complex Suggests Differential Assembly of Oct4 and Sox2 on Two Enhancers
Genes Dev., 17, 2003
6AZW
DownloadVisualize
BU of 6azw by Molmil
IDO1/FXB-001116 crystal structure
Descriptor: (2R)-N-(4-cyanophenyl)-2-[cis-4-(quinolin-4-yl)cyclohexyl]propanamide, Indoleamine 2,3-dioxygenase 1
Authors:Lewis, H.A, Lammens, A, Steinbacher, S.
Deposit date:2017-09-13
Release date:2018-03-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Immune-modulating enzyme indoleamine 2,3-dioxygenase is effectively inhibited by targeting its apo-form.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3RE9
DownloadVisualize
BU of 3re9 by Molmil
Crystal structure of sortaseC1 from Streptococcus suis
Descriptor: Sortase-like protein
Authors:Lu, G, Qi, J, Gao, F, Yan, J, Tang, J, Gao, G.F.
Deposit date:2011-04-04
Release date:2011-06-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel "open-form" structure of sortaseC from Streptococcus suis.
Proteins, 79, 2011
3BG1
DownloadVisualize
BU of 3bg1 by Molmil
Architecture of a Coat for the Nuclear Pore Membrane
Descriptor: Nucleoporin NUP145, Protein SEC13 homolog
Authors:Hoelz, A.
Deposit date:2007-11-23
Release date:2008-01-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Architecture of a coat for the nuclear pore membrane.
Cell(Cambridge,Mass.), 131, 2007
5MQL
DownloadVisualize
BU of 5mql by Molmil
Crystal structure of dCK mutant C3S in complex with masitinib and UDP
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Deoxycytidine kinase, MAGNESIUM ION, ...
Authors:Rebuffet, E, Hammam, K, Saez-Ayala, M, Gros, L, Lopez, S, Hajem, B, Humbert, M, Baudelet, E, Audebert, S, Betzi, S, Lugari, A, Combes, S, Pez, D, Letard, S, Mansfield, C, Moussy, A, de Sepulveda, P, Morelli, X, Dubreuil, P.
Deposit date:2016-12-20
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology.
Nat Commun, 8, 2017
3R42
DownloadVisualize
BU of 3r42 by Molmil
Crystal structure of the yeast vps23 UEV domain in complex with a vps27 PSDP peptide
Descriptor: Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease, Vacuolar protein sorting-associated protein 27
Authors:Ren, X, Hurley, J.H.
Deposit date:2011-03-17
Release date:2011-05-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.866 Å)
Cite:Structural basis for endosomal recruitment of ESCRT-I by ESCRT-0 in yeast.
Embo J., 30, 2011
8ARI
DownloadVisualize
BU of 8ari by Molmil
Cryo-EM structure of human CtBP1/RAI2(303-362) delta(331-341) filament
Descriptor: C-terminal-binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Retinoic acid-induced protein 2
Authors:Mullapudi, E, Goradia, N, Wilmanns, M.
Deposit date:2022-08-16
Release date:2023-08-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of human CtBP1/RAI2(303-362) delta(331-341) filament
To Be Published
3OGB
DownloadVisualize
BU of 3ogb by Molmil
Sperm whale myoglobin mutant H64W deoxy-form
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Birukou, I, Soman, J, Olson, J.S.
Deposit date:2010-08-16
Release date:2010-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Blocking the gate to ligand entry in human hemoglobin.
J.Biol.Chem., 286, 2011
6BJQ
DownloadVisualize
BU of 6bjq by Molmil
Eubacterium eligens beta-glucuronidase bound to glucuronic acid
Descriptor: Glycoside Hydrolase Family 2 candidate b-glucuronidase, beta-D-glucopyranuronic acid
Authors:Pellock, S.J, Walton, W.G, Redinbo, M.R.
Deposit date:2017-11-06
Release date:2018-07-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Gut Microbial beta-Glucuronidase Inhibition via Catalytic Cycle Interception.
ACS Cent Sci, 4, 2018
6LQ3
DownloadVisualize
BU of 6lq3 by Molmil
Crystal Structure of E447A Acyl-CoA Dehydrogenase FadE5 mutant from Mycobacteria smegmatis in complex with C12CoA
Descriptor: Acyl-CoA dehydrogenase, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Liu, X, Chen, X.B.
Deposit date:2020-01-12
Release date:2020-07-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria.
Proc.Natl.Acad.Sci.USA, 117, 2020
3RFG
DownloadVisualize
BU of 3rfg by Molmil
Crystal structure of the yeast RACK1 dimer in space group P63
Descriptor: Guanine nucleotide-binding protein subunit beta-like protein
Authors:Yatime, L, Hein, K.L, Nilsson, J, Nissen, P.
Deposit date:2011-04-06
Release date:2011-07-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of the RACK1 dimer from Saccharomyces cerevisiae
J.Mol.Biol., 411, 2011
5MR6
DownloadVisualize
BU of 5mr6 by Molmil
XiaF from Streptomyces sp. in complex with FADH2 and Glycerol
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, XiaF protein
Authors:Kugel, S, Baunach, M, Baer, P, Ishida-Ito, M, Sundaram, S, Xu, Z, Groll, M, Hertweck, C.
Deposit date:2016-12-21
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cryptic indole hydroxylation by a non-canonical terpenoid cyclase parallels bacterial xenobiotic detoxification.
Nat Commun, 8, 2017
6UOG
DownloadVisualize
BU of 6uog by Molmil
Asparaginase II from Escherichia coli
Descriptor: ASPARTIC ACID, L-asparaginase 2
Authors:Araujo, T.S, Almeida, M.S, Lima, L.M.T.R.
Deposit date:2019-10-14
Release date:2020-10-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2.
Biophys.Chem., 271, 2021
8ATI
DownloadVisualize
BU of 8ati by Molmil
Human CtBP2(31-364) in complex with RAI2 peptide(315-322)
Descriptor: DI(HYDROXYETHYL)ETHER, Isoform 2 of C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Mullapudi, E, Goradia, N, Wilmanns, M.
Deposit date:2022-08-23
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Human CtBP2(31-364) in complex with RAI2 peptide(315-322)
To Be Published
5MXO
DownloadVisualize
BU of 5mxo by Molmil
Crystal structure of 14-3-3sigma and a p53 C-terminal 12-mer synthetic phosphopeptide stabilized by Fusicoccin-A
Descriptor: 14-3-3 protein sigma, CHLORIDE ION, FUSICOCCIN, ...
Authors:Andrei, S, Ottmann, C, Leysen, S.
Deposit date:2017-01-24
Release date:2017-11-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Small-molecule stabilization of the p53 - 14-3-3 protein-protein interaction.
FEBS Lett., 591, 2017
1H0J
DownloadVisualize
BU of 1h0j by Molmil
Structural Basis of the Membrane-induced Cardiotoxin A3 Oligomerization
Descriptor: CARDIOTOXIN-3, DODECYL SULFATE
Authors:Forouhar, F, Huang, W.-N, Liu, J.-H, Chien, K.-Y, Wu, W.-G, Hsiao, C.-D.
Deposit date:2002-06-20
Release date:2003-06-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of Membrane-Induced Cardiotoxin A3 Oligomerization
J.Biol.Chem., 278, 2003
7MBX
DownloadVisualize
BU of 7mbx by Molmil
Human Cholecystokinin 1 receptor (CCK1R) Gs complex
Descriptor: CHOLESTEROL HEMISUCCINATE, Cholecystokinin receptor type A, Cholecystokinin-8, ...
Authors:Mobbs, J.I, Belousoff, M.J, Danev, R, Thal, D.M, Sexton, P.M.
Deposit date:2021-04-01
Release date:2021-05-26
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (1.95 Å)
Cite:Structures of the human cholecystokinin 1 (CCK1) receptor bound to Gs and Gq mimetic proteins provide insight into mechanisms of G protein selectivity.
Plos Biol., 19, 2021

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon